RNA–Protein interactions for RNA: ENST00000361530.10

CNKSR1-201, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-201ENST00000361530 TFDP1Q14186 410 aa16.34■□□□□ 0.21
CNKSR1-201ENST00000361530 PDK4Q16654 411 aa16.34■□□□□ 0.21
CNKSR1-201ENST00000361530 DUOXA2Q1HG44 320 aa16.34■□□□□ 0.21
CNKSR1-201ENST00000361530 SGSM1Q2NKQ1 1148 aa16.34■□□□□ 0.21
CNKSR1-201ENST00000361530 ZNF772Q68DY9 489 aaPredicted RBP16.34■□□□□ 0.21
CNKSR1-201ENST00000361530 NIPA2Q8N8Q9 360 aa16.34■□□□□ 0.21
CNKSR1-201ENST00000361530 UTP4Q969X6 686 aaKnown RBP16.34■□□□□ 0.21
CNKSR1-201ENST00000361530 ZNF668Q96K58 619 aaPredicted RBP16.34■□□□□ 0.21
CNKSR1-201ENST00000361530 ACO2Q99798 780 aaKnown RBP16.34■□□□□ 0.21
CNKSR1-201ENST00000361530 ETNK1Q9HBU6 452 aa16.34■□□□□ 0.21
CNKSR1-201ENST00000361530 DDX56Q9NY93 547 aaKnown RBP16.34■□□□□ 0.21
CNKSR1-201ENST00000361530 RABGEF1Q9UJ41 708 aa16.34■□□□□ 0.21
CNKSR1-201ENST00000361530 AFG3L2Q9Y4W6 797 aa16.34■□□□□ 0.21
CNKSR1-201ENST00000361530 GJA3Q9Y6H8 435 aa16.34■□□□□ 0.21
CNKSR1-201ENST00000361530 TCRBV7S3A2A0A539 114 aa16.33■□□□□ 0.21
CNKSR1-201ENST00000361530 ABLIM1O14639 778 aa16.33■□□□□ 0.21
CNKSR1-201ENST00000361530 CST8O60676 142 aa16.33■□□□□ 0.21
CNKSR1-201ENST00000361530 LRCH4O75427 683 aa16.33■□□□□ 0.21
CNKSR1-201ENST00000361530 MAFO75444 373 aaPredicted RBP16.33■□□□□ 0.21
CNKSR1-201ENST00000361530 PSMA2P25787 234 aa16.33■□□□□ 0.21
CNKSR1-201ENST00000361530 ASPAP45381 313 aa16.33■□□□□ 0.21
CNKSR1-201ENST00000361530 CTCFP49711 727 aaPredicted RBP16.33■□□□□ 0.21
CNKSR1-201ENST00000361530 STAT5BP51692 787 aa16.33■□□□□ 0.21
CNKSR1-201ENST00000361530 CCDC15Q0P6D6 951 aa16.33■□□□□ 0.21
CNKSR1-201ENST00000361530 HIF1AQ16665 826 aa16.33■□□□□ 0.21
CNKSR1-201ENST00000361530 FAM182AQ5T1J6 154 aa16.33■□□□□ 0.21
CNKSR1-201ENST00000361530 CDR2LQ86X02 465 aaPredicted RBP16.33■□□□□ 0.21
CNKSR1-201ENST00000361530 CPT1BQ92523 772 aa16.33■□□□□ 0.21
CNKSR1-201ENST00000361530 ERP27Q96DN0 273 aa16.33■□□□□ 0.21
CNKSR1-201ENST00000361530 ZNF518BQ9C0D4 1074 aa16.33■□□□□ 0.21
CNKSR1-201ENST00000361530 XYLT2Q9H1B5 865 aa16.33■□□□□ 0.21
CNKSR1-201ENST00000361530 NRBP2Q9NSY0 501 aa16.33■□□□□ 0.21
CNKSR1-201ENST00000361530 NOP53Q9NZM5 478 aaKnown RBP16.33■□□□□ 0.21
CNKSR1-201ENST00000361530 PCDHGC3Q9UN70 934 aa16.33■□□□□ 0.21
CNKSR1-201ENST00000361530 POLIQ9UNA4 740 aa16.33■□□□□ 0.21
CNKSR1-201ENST00000361530 C19orf81C9J6K1 198 aa16.33■□□□□ 0.2
CNKSR1-201ENST00000361530 NFKBIEO00221 500 aa16.33■□□□□ 0.2
CNKSR1-201ENST00000361530 EDF1O60869 148 aaKnown RBP16.33■□□□□ 0.2
CNKSR1-201ENST00000361530 KRT4P19013 534 aa16.33■□□□□ 0.2
CNKSR1-201ENST00000361530 RAP1GAPP47736 663 aa16.33■□□□□ 0.2
CNKSR1-201ENST00000361530 AP3M2P53677 418 aa16.33■□□□□ 0.2
CNKSR1-201ENST00000361530 SLC18A1P54219 525 aa16.33■□□□□ 0.2
CNKSR1-201ENST00000361530 OSTNP61366 133 aa16.33■□□□□ 0.2
CNKSR1-201ENST00000361530 ORC1Q13415 861 aa16.33■□□□□ 0.2
CNKSR1-201ENST00000361530 TRPC3Q13507 836 aa16.33■□□□□ 0.2
CNKSR1-201ENST00000361530 EMC1Q8N766 993 aa16.33■□□□□ 0.2
CNKSR1-201ENST00000361530 MRPL4Q9BYD3 311 aaKnown RBP16.33■□□□□ 0.2
CNKSR1-201ENST00000361530 C12orf65Q9H3J6 166 aaKnown RBP16.33■□□□□ 0.2
CNKSR1-201ENST00000361530 HOXC10Q9NYD6 342 aa16.33■□□□□ 0.2
CNKSR1-201ENST00000361530 PIM2Q9P1W9 311 aa16.33■□□□□ 0.2
CNKSR1-201ENST00000361530 NXF1Q9UBU9 619 aaKnown RBP16.33■□□□□ 0.2
CNKSR1-201ENST00000361530 CPSF3Q9UKF6 684 aaKnown RBP16.33■□□□□ 0.2
CNKSR1-201ENST00000361530 SMG5Q9UPR3 1016 aaKnown RBP16.33■□□□□ 0.2
CNKSR1-201ENST00000361530 AGTPBP1Q9UPW5 1226 aa16.33■□□□□ 0.2
CNKSR1-201ENST00000361530 SNCAIPQ9Y6H5 919 aa16.33■□□□□ 0.2
CNKSR1-201ENST00000361530 HOXC6P09630 235 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 KRT3P12035 628 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 NRLP54845 237 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 SLC8A3P57103 927 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 EFHC2Q5JST6 749 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 RGS9BPQ6ZS82 235 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 LRRC71Q8N4P6 559 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 PSMC3IPQ9P2W1 217 aaPredicted RBP16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 SLC24A2Q9UI40 661 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 OGTO15294 1046 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 CD19P15391 556 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 MARK3P27448 753 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 RPL22P35268 128 aaKnown RBP16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 TCF7P36402 384 aaPredicted RBP16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 YARSP54577 528 aaKnown RBP16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 TAP1Q03518 808 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 TAF5Q15542 800 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 ZNF699Q32M78 642 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 LVRNQ6Q4G3 990 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 EEPD1Q7L9B9 569 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 THNSL1Q8IYQ7 743 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 NAT8LQ8N9F0 302 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 RNF149Q8NC42 400 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 DNERQ8NFT8 737 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 LRRC8CQ8TDW0 803 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 TMEM237Q96Q45 408 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 RPS12P25398 132 aaKnown RBP16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 SKIV2L2P42285 1042 aaKnown RBP16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 CDH8P55286 799 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 GEMIN4P57678 1058 aaKnown RBP16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 LAMTOR4Q0VGL1 99 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 GRM1Q13255 1194 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 POLNQ7Z5Q5 900 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 VSIG1Q86XK7 387 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 UNC45BQ8IWX7 931 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 PYROXD1Q8WU10 500 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 SENP1Q9P0U3 644 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 PCSK1NQ9UHG2 260 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 USH1CQ9Y6N9 552 aa16.32■□□□□ 0.2
CNKSR1-201ENST00000361530 SIGLEC16A6NMB1 481 aa16.31■□□□□ 0.2
CNKSR1-201ENST00000361530 PRKCBP05771 671 aa16.31■□□□□ 0.2
CNKSR1-201ENST00000361530 GJB1P08034 283 aa16.31■□□□□ 0.2
CNKSR1-201ENST00000361530 KDELR1P24390 212 aa16.31■□□□□ 0.2
CNKSR1-201ENST00000361530 TARSP26639 723 aaKnown RBP16.31■□□□□ 0.2
CNKSR1-201ENST00000361530 PRKG1Q13976 671 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms