RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 FPGSQ05932 587 aa14.67□□□□□ -0.06
PDLIM5-203ENST00000359265 DENND1BQ6P3S1 775 aa14.67□□□□□ -0.06
PDLIM5-203ENST00000359265 ACOT1Q86TX2 421 aa14.67□□□□□ -0.06
PDLIM5-203ENST00000359265 PDCL2Q8N4E4 241 aa14.67□□□□□ -0.06
PDLIM5-203ENST00000359265 ZNF564Q8TBZ8 553 aaPredicted RBP14.67□□□□□ -0.06
PDLIM5-203ENST00000359265 TNIP3Q96KP6 325 aa14.67□□□□□ -0.06
PDLIM5-203ENST00000359265 FAM193BQ96PV7 902 aaPredicted RBP14.67□□□□□ -0.06
PDLIM5-203ENST00000359265 NUP85Q9BW27 656 aa14.67□□□□□ -0.06
PDLIM5-203ENST00000359265 OSGEPQ9NPF4 335 aa14.67□□□□□ -0.06
PDLIM5-203ENST00000359265 ADAM22Q9P0K1 906 aa14.67□□□□□ -0.06
PDLIM5-203ENST00000359265 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.66□□□□□ -0.06
PDLIM5-203ENST00000359265 ENC1O14682 589 aa14.66□□□□□ -0.06
PDLIM5-203ENST00000359265 AMHP03971 560 aa14.66□□□□□ -0.06
PDLIM5-203ENST00000359265 ODC1P11926 461 aa14.66□□□□□ -0.06
PDLIM5-203ENST00000359265 MMP8P22894 467 aa14.66□□□□□ -0.06
PDLIM5-203ENST00000359265 AARSP49588 968 aaKnown RBP eCLIP14.66□□□□□ -0.06
PDLIM5-203ENST00000359265 NHLH1Q02575 133 aa14.66□□□□□ -0.06
PDLIM5-203ENST00000359265 RNASELQ05823 741 aaKnown RBP14.66□□□□□ -0.06
PDLIM5-203ENST00000359265 DSC1Q08554 894 aa14.66□□□□□ -0.06
PDLIM5-203ENST00000359265 GOLGA7BQ2TAP0 167 aa14.66□□□□□ -0.06
PDLIM5-203ENST00000359265 PAPD7Q5XG87 772 aaKnown RBP14.66□□□□□ -0.06
PDLIM5-203ENST00000359265 ARHGAP17Q68EM7 881 aa14.66□□□□□ -0.06
PDLIM5-203ENST00000359265 DCLRE1AQ6PJP8 1040 aa14.66□□□□□ -0.06
PDLIM5-203ENST00000359265 LCLAT1Q6UWP7 414 aa14.66□□□□□ -0.06
PDLIM5-203ENST00000359265 MMS22LQ6ZRQ5 1243 aa14.66□□□□□ -0.06
PDLIM5-203ENST00000359265 LRRC57Q8N9N7 239 aa14.66□□□□□ -0.06
PDLIM5-203ENST00000359265 C3orf58Q8NDZ4 430 aa14.66□□□□□ -0.06
PDLIM5-203ENST00000359265 MRPL9Q9BYD2 267 aaKnown RBP14.66□□□□□ -0.06
PDLIM5-203ENST00000359265 TBC1D13Q9NVG8 400 aa14.66□□□□□ -0.06
PDLIM5-203ENST00000359265 HESX1Q9UBX0 185 aa14.66□□□□□ -0.06
PDLIM5-203ENST00000359265 CDC23Q9UJX2 597 aa14.66□□□□□ -0.06
PDLIM5-203ENST00000359265 STRIP2Q9ULQ0 834 aa14.66□□□□□ -0.06
PDLIM5-203ENST00000359265 HYOU1Q9Y4L1 999 aa14.66□□□□□ -0.06
PDLIM5-203ENST00000359265 NME7Q9Y5B8 376 aa14.66□□□□□ -0.06
PDLIM5-203ENST00000359265 MRFAP1Q9Y605 127 aa14.66□□□□□ -0.06
PDLIM5-203ENST00000359265 SCINQ9Y6U3 715 aa14.66□□□□□ -0.06
PDLIM5-203ENST00000359265 PTPRDP23468 1912 aa14.66□□□□□ -0.06
PDLIM5-203ENST00000359265 TMEM189-UBE2V1I3L0A0 370 aa14.65□□□□□ -0.06
PDLIM5-203ENST00000359265 B3GAT3O94766 335 aa14.65□□□□□ -0.06
PDLIM5-203ENST00000359265 FTCDO95954 541 aa14.65□□□□□ -0.06
PDLIM5-203ENST00000359265 SETSIPP0DME0 302 aa14.65□□□□□ -0.06
PDLIM5-203ENST00000359265 TCP1P17987 556 aaKnown RBP14.65□□□□□ -0.06
PDLIM5-203ENST00000359265 LHX1P48742 406 aa14.65□□□□□ -0.06
PDLIM5-203ENST00000359265 TERF1P54274 439 aa14.65□□□□□ -0.06
PDLIM5-203ENST00000359265 AMPD2Q01433 879 aa14.65□□□□□ -0.06
PDLIM5-203ENST00000359265 TCTN1Q2MV58 587 aa14.65□□□□□ -0.06
PDLIM5-203ENST00000359265 WSCD1Q658N2 575 aa14.65□□□□□ -0.06
PDLIM5-203ENST00000359265 C11orf63Q6NUN7 778 aa14.65□□□□□ -0.06
PDLIM5-203ENST00000359265 PSRC1Q6PGN9 363 aaPredicted RBP14.65□□□□□ -0.06
PDLIM5-203ENST00000359265 PEX26Q7Z412 305 aa14.65□□□□□ -0.06
PDLIM5-203ENST00000359265 SLFN11Q7Z7L1 901 aa14.65□□□□□ -0.06
PDLIM5-203ENST00000359265 DAAM2Q86T65 1068 aa14.65□□□□□ -0.06
PDLIM5-203ENST00000359265 OSTM1Q86WC4 334 aa14.65□□□□□ -0.06
PDLIM5-203ENST00000359265 ERICH1Q86X53 443 aa14.65□□□□□ -0.06
PDLIM5-203ENST00000359265 METTL23Q86XA0 190 aa14.65□□□□□ -0.06
PDLIM5-203ENST00000359265 CRYBG2Q8N1P7 616 aa14.65□□□□□ -0.06
PDLIM5-203ENST00000359265 PAAF1Q9BRP4 392 aa14.65□□□□□ -0.06
PDLIM5-203ENST00000359265 MRPL47Q9HD33 250 aaKnown RBP14.65□□□□□ -0.06
PDLIM5-203ENST00000359265 TSPAN16Q9UKR8 245 aa14.65□□□□□ -0.06
PDLIM5-203ENST00000359265 DSEQ9UL01 958 aa14.65□□□□□ -0.06
PDLIM5-203ENST00000359265 SNX12Q9UMY4 172 aa14.65□□□□□ -0.06
PDLIM5-203ENST00000359265 COG5Q9UP83 839 aa14.65□□□□□ -0.06
PDLIM5-203ENST00000359265 SAR1BQ9Y6B6 198 aa14.65□□□□□ -0.06
PDLIM5-203ENST00000359265 VWA8A3KMH1 1905 aa14.64□□□□□ -0.07
PDLIM5-203ENST00000359265 PATJQ8NI35 1801 aa14.64□□□□□ -0.07
PDLIM5-203ENST00000359265 NLRC5Q86WI3 1866 aa14.64□□□□□ -0.07
PDLIM5-203ENST00000359265 GABRDO14764 452 aa14.64□□□□□ -0.07
PDLIM5-203ENST00000359265 TLL1O43897 1013 aa14.64□□□□□ -0.07
PDLIM5-203ENST00000359265 BUB1BO60566 1050 aaPredicted RBP14.64□□□□□ -0.07
PDLIM5-203ENST00000359265 SLU7O95391 586 aaKnown RBP14.64□□□□□ -0.07
PDLIM5-203ENST00000359265 PDGFRBP09619 1106 aa14.64□□□□□ -0.07
PDLIM5-203ENST00000359265 PRLRP16471 622 aa14.64□□□□□ -0.07
PDLIM5-203ENST00000359265 RRM1P23921 792 aa14.64□□□□□ -0.07
PDLIM5-203ENST00000359265 PTP4A2Q12974 167 aa14.64□□□□□ -0.07
PDLIM5-203ENST00000359265 WHAMMP3Q1A5X7 153 aa14.64□□□□□ -0.07
PDLIM5-203ENST00000359265 TIGD5Q53EQ6 642 aa14.64□□□□□ -0.07
PDLIM5-203ENST00000359265 MEI1Q5TIA1 1274 aa14.64□□□□□ -0.07
PDLIM5-203ENST00000359265 COLGALT2Q8IYK4 626 aa14.64□□□□□ -0.07
PDLIM5-203ENST00000359265 B3GALNT2Q8NCR0 500 aa14.64□□□□□ -0.07
PDLIM5-203ENST00000359265 MYRIPQ8NFW9 859 aa14.64□□□□□ -0.07
PDLIM5-203ENST00000359265 IPO4Q8TEX9 1081 aaKnown RBP14.64□□□□□ -0.07
PDLIM5-203ENST00000359265 UBE2Q2Q8WVN8 375 aa14.64□□□□□ -0.07
PDLIM5-203ENST00000359265 RABGGTAQ92696 567 aa14.64□□□□□ -0.07
PDLIM5-203ENST00000359265 VWCEQ96DN2 955 aa14.64□□□□□ -0.07
PDLIM5-203ENST00000359265 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.64□□□□□ -0.07
PDLIM5-203ENST00000359265 MIS12Q9H081 205 aa14.64□□□□□ -0.07
PDLIM5-203ENST00000359265 CD320Q9NPF0 282 aa14.64□□□□□ -0.07
PDLIM5-203ENST00000359265 FAM49BQ9NUQ9 324 aa14.64□□□□□ -0.07
PDLIM5-203ENST00000359265 AMFRQ9UKV5 643 aa14.64□□□□□ -0.07
PDLIM5-203ENST00000359265 PTPRSQ13332 1948 aa14.64□□□□□ -0.07
PDLIM5-203ENST00000359265 CHD7Q9P2D1 2997 aa14.64□□□□□ -0.07
PDLIM5-203ENST00000359265 PI4K2BG5E9Z4 385 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 M0QZQ0 153 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 NCK2O43639 380 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 DDHD2O94830 711 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 KIF4AO95239 1232 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 FGBP02675 491 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 ACRP10323 421 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 LMO2P25791 158 aa14.63□□□□□ -0.07
PDLIM5-203ENST00000359265 PCSK1P29120 753 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms