RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 GALNT18Q6P9A2 607 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 DGKHQ86XP1 1220 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 TMEM139Q8IV31 216 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 ARHGEF1Q92888 912 aaKnown RBP6.32□□□□□ -1.4
VPS13B-203ENST00000358544 NUDT12Q9BQG2 462 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 NACA2Q9H009 215 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 EBF2Q9HAK2 575 aa6.32□□□□□ -1.4
VPS13B-203ENST00000358544 RALAP11233 206 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 MECOMQ03112 1051 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 RRP1BQ14684 758 aaKnown RBP6.31□□□□□ -1.4
VPS13B-203ENST00000358544 SF3B3Q15393 1217 aaKnown RBP6.31□□□□□ -1.4
VPS13B-203ENST00000358544 TBC1D10BQ4KMP7 808 aaPredicted RBP6.31□□□□□ -1.4
VPS13B-203ENST00000358544 SLC10A4Q96EP9 437 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 CEP44Q9C0F1 390 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 EML4Q9HC35 981 aaKnown RBP6.31□□□□□ -1.4
VPS13B-203ENST00000358544 SERPINB5P36952 375 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 GRIK3Q13003 919 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 CHURC1Q8WUH1 139 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 CKAP2Q8WWK9 683 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 DOLKQ9UPQ8 538 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 PRELID1Q9Y255 219 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 SH3BP1Q9Y3L3 701 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 TAF6LQ9Y6J9 622 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 TNRQ92752 1358 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 CAMTA2O94983 1202 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 USP17L8P0C7I0 530 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 ADRA1DP25100 572 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 CCDC142Q17RM4 750 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 C11orf63Q6NUN7 778 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 KRT27Q7Z3Y8 459 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 RIN3Q8TB24 985 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 DQX1Q8TE96 717 aaKnown RBP6.31□□□□□ -1.4
VPS13B-203ENST00000358544 OSCP1Q8WVF1 389 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 DDX50Q9BQ39 737 aaKnown RBP6.31□□□□□ -1.4
VPS13B-203ENST00000358544 HMG20AQ9NP66 347 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 IARS2Q9NSE4 1012 aaKnown RBP6.31□□□□□ -1.4
VPS13B-203ENST00000358544 SOX6P35712 828 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 MMP13P45452 471 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 KHDRBS1Q07666 443 aaKnown RBP eCLIP6.31□□□□□ -1.4
VPS13B-203ENST00000358544 PACS1Q6VY07 963 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 CCDC33Q8N5R6 958 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 DIS3LQ8TF46 1054 aaKnown RBP6.31□□□□□ -1.4
VPS13B-203ENST00000358544 PHF21AQ96BD5 680 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 FAM53CQ9NYF3 392 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 PCDHA6Q9UN73 950 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 PCDHA8Q9Y5H6 950 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 SCN1AP35498 2009 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 H3BNX3 289 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 TPST1O60507 370 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 NSUN2Q08J23 767 aaKnown RBP eCLIP6.31□□□□□ -1.4
VPS13B-203ENST00000358544 NLRX1Q86UT6 975 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 ZBTB8BQ8NAP8 495 aaPredicted RBP6.31□□□□□ -1.4
VPS13B-203ENST00000358544 ENKURQ8TC29 256 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 ZFAND2BQ8WV99 257 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 UCMAQ8WVF2 138 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 DLG3Q92796 817 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 WNK4Q96J92 1243 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 ADPGKQ9BRR6 497 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 UBXN6Q9BZV1 441 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 TMEM117Q9H0C3 514 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 NINJ2Q9NZG7 142 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 SQORQ9Y6N5 450 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 ARHGEF40Q8TER5 1519 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 A0A087X0T9 212 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 NPHP3-ACAD11A0A0J9YXS1 232 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 PGM3O95394 542 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 FAM228BP0C875 321 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 HPCAP84074 193 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 PPP6R3Q5H9R7 873 aaPredicted RBP6.31□□□□□ -1.4
VPS13B-203ENST00000358544 POTEGQ6S5H5 508 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 ANGPTL8Q6UXH0 198 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 WDR11Q9BZH6 1224 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 RPRD1BQ9NQG5 326 aaKnown RBP6.31□□□□□ -1.4
VPS13B-203ENST00000358544 NCANO14594 1321 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 CYTH3O43739 400 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 NMT2O60551 498 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 EIF2AK2P19525 551 aaKnown RBP6.31□□□□□ -1.4
VPS13B-203ENST00000358544 CCR3P51677 355 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 NFX1Q12986 1120 aaKnown RBP6.31□□□□□ -1.4
VPS13B-203ENST00000358544 MAPK6Q16659 721 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 MROH9Q5TGP6 573 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 COA7Q96BR5 231 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 PREBQ9HCU5 417 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 TFCP2L1Q9NZI6 479 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 SEL1LQ9UBV2 794 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 PAEPP09466 180 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 PSMB9P28065 219 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 SLC16A2P36021 539 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 PRMT9Q6P2P2 845 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 SNX32Q86XE0 403 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 PCDH12Q9NPG4 1184 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 MAD2L2Q9UI95 211 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 GGA1Q9UJY5 639 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 TELO2Q9Y4R8 837 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 ALG6Q9Y672 507 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 M0QYV0 167 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 SLC4A1P02730 911 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 NUDT17P0C025 328 aa6.31□□□□□ -1.4
VPS13B-203ENST00000358544 TFAMQ00059 246 aaKnown RBP6.31□□□□□ -1.4
VPS13B-203ENST00000358544 CAPRIN1Q14444 709 aaKnown RBP6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms