RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 DLG1Q12959 904 aa9.77□□□□□ -0.85
SMARCAL1-202ENST00000358207 NAB2Q15742 525 aa9.77□□□□□ -0.85
SMARCAL1-202ENST00000358207 IL17AQ16552 155 aa9.77□□□□□ -0.85
SMARCAL1-202ENST00000358207 DCAF6Q58WW2 860 aa9.77□□□□□ -0.85
SMARCAL1-202ENST00000358207 MIIPQ5JXC2 388 aa9.77□□□□□ -0.85
SMARCAL1-202ENST00000358207 UGT2A3Q6UWM9 527 aa9.77□□□□□ -0.85
SMARCAL1-202ENST00000358207 TMEM179Q6ZVK1 233 aa9.77□□□□□ -0.85
SMARCAL1-202ENST00000358207 RFPL4BQ6ZWI9 263 aa9.77□□□□□ -0.85
SMARCAL1-202ENST00000358207 TAOK1Q7L7X3 1001 aa9.77□□□□□ -0.85
SMARCAL1-202ENST00000358207 STMN2Q93045 179 aa9.77□□□□□ -0.85
SMARCAL1-202ENST00000358207 SKA1Q96BD8 255 aa9.77□□□□□ -0.85
SMARCAL1-202ENST00000358207 KCNK9Q9NPC2 374 aa9.77□□□□□ -0.85
SMARCAL1-202ENST00000358207 VPS51Q9UID3 782 aa9.77□□□□□ -0.85
SMARCAL1-202ENST00000358207 KIAA1257Q9ULG3 409 aa9.77□□□□□ -0.85
SMARCAL1-202ENST00000358207 STXBP5LQ9Y2K9 1186 aa9.77□□□□□ -0.85
SMARCAL1-202ENST00000358207 KRIT1O00522 736 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 ADCY6O43306 1168 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 APOEP02649 317 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 VCPP55072 806 aaKnown RBP9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 BTKQ06187 659 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 NONOQ15233 471 aaKnown RBP eCLIP9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 SF3B4Q15427 424 aaKnown RBP eCLIP9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 ZNF658Q5TYW1 1059 aaPredicted RBP9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 IL23RQ5VWK5 629 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 ZDHHC24Q6UX98 284 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 CROCCP3Q8IVE0 287 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 REXO1Q8N1G1 1221 aaKnown RBP9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 DDHD1Q8NEL9 900 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 ANKRD36BP1Q96IX9 119 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 TMEM109Q9BVC6 243 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 AS3MTQ9HBK9 375 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 SLC38A7Q9NVC3 462 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 PKD2L1Q9P0L9 805 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 SNX9Q9Y5X1 595 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 LRRC53A6NM62 1247 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 H3BSA7 217 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 RBAK-RBAKDNI3L0D1 243 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 ARHGAP33O14559 1287 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 ATMINO43313 823 aaPredicted RBP9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 CFBP00751 764 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 FGFR4P22455 802 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 MKRN3Q13064 507 aaKnown RBP9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 SPP2Q13103 211 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 MED21Q13503 144 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 FIGNQ5HY92 759 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 DCDC5Q6ZRR9 648 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 ANKMY2Q8IV38 441 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 CACTIN-AS1Q8N1I8 211 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 RNF169Q8NCN4 708 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 FBXO25Q8TCJ0 367 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 TRPC4APQ8TEL6 797 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 PTCD2Q8WV60 388 aaKnown RBP9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 ANKS1AQ92625 1134 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 MAGEB18Q96M61 343 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 PACSIN1Q9BY11 444 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 GRIP2Q9C0E4 1043 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 KLHL4Q9C0H6 718 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 B3GNT4Q9C0J1 378 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 SLCO1B3Q9NPD5 702 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 PCDHGB4Q9UN71 923 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 PCDHGB5Q9Y5G0 923 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 MKI67P46013 3256 aaKnown RBP9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 TBKBP1A7MCY6 615 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 MARCH6O60337 910 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 DNAJC6O75061 913 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 CHRNB1P11230 501 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 CAP2P40123 477 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 TECP42680 631 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 MTIF2P46199 727 aaKnown RBP9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 PLTPP55058 493 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 WASHC5Q12768 1159 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 PHKG1Q16816 387 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 LONRF1Q17RB8 773 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 EXOC3L4Q17RC7 722 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 HGSNATQ68CP4 663 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 FBXL19Q6PCT2 694 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 PDSS2Q86YH6 399 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 ADSSL1Q8N142 457 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 METTL13Q8N6R0 699 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 SPERTQ8NA61 448 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 GOLM1Q8NBJ4 401 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 PYROXD1Q8WU10 500 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 TNFRSF25Q93038 417 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 CCDC17Q96LX7 622 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 CYTH2Q99418 400 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 GPATCH1Q9BRR8 931 aaKnown RBP9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 BTBD10Q9BSF8 475 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 LRRC27Q9C0I9 530 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 SNX25Q9H3E2 840 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 EHD1Q9H4M9 534 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 PLGRKTQ9HBL7 147 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 FAM207AQ9NSI2 230 aaPredicted RBP9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 MTUS1Q9ULD2 1270 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 PPM1HQ9ULR3 514 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 TRAF3IP3Q9Y228 551 aa9.76□□□□□ -0.85
SMARCAL1-202ENST00000358207 MYH11P35749 1972 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 A6NL46 340 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 BMP3P12645 472 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 STX2P32856 288 aa9.75□□□□□ -0.85
SMARCAL1-202ENST00000358207 GPC3P51654 580 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms