RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 TNNI1P19237 187 aa11.98□□□□□ -0.49
CAPN9-202ENST00000354537 GJC1P36383 396 aa11.98□□□□□ -0.49
CAPN9-202ENST00000354537 AP3M2P53677 418 aa11.98□□□□□ -0.49
CAPN9-202ENST00000354537 NOP14P78316 857 aaKnown RBP11.98□□□□□ -0.49
CAPN9-202ENST00000354537 TBCCQ15814 346 aa11.98□□□□□ -0.49
CAPN9-202ENST00000354537 ATP13A4Q4VNC1 1196 aa11.98□□□□□ -0.49
CAPN9-202ENST00000354537 PLA2G4FQ68DD2 849 aa11.98□□□□□ -0.49
CAPN9-202ENST00000354537 SLFN12LQ6IEE8 588 aa11.98□□□□□ -0.49
CAPN9-202ENST00000354537 MTHFD1LQ6UB35 978 aa11.98□□□□□ -0.49
CAPN9-202ENST00000354537 TMEM270Q6UE05 265 aa11.98□□□□□ -0.49
CAPN9-202ENST00000354537 TMPRSS6Q8IU80 811 aa11.98□□□□□ -0.49
CAPN9-202ENST00000354537 PALM2Q8IXS6 379 aa11.98□□□□□ -0.49
CAPN9-202ENST00000354537 THNSL1Q8IYQ7 743 aa11.98□□□□□ -0.49
CAPN9-202ENST00000354537 PDIK1LQ8N165 341 aa11.98□□□□□ -0.49
CAPN9-202ENST00000354537 SMC1BQ8NDV3 1235 aa11.98□□□□□ -0.49
CAPN9-202ENST00000354537 ATP6V0A1Q93050 837 aa11.98□□□□□ -0.49
CAPN9-202ENST00000354537 TMEM120AQ9BXJ8 343 aa11.98□□□□□ -0.49
CAPN9-202ENST00000354537 KCNK4Q9NYG8 393 aa11.98□□□□□ -0.49
CAPN9-202ENST00000354537 CNTN3Q9P232 1028 aa11.98□□□□□ -0.49
CAPN9-202ENST00000354537 CPSF2Q9P2I0 782 aaKnown RBP11.98□□□□□ -0.49
CAPN9-202ENST00000354537 DCTN4Q9UJW0 460 aa11.98□□□□□ -0.49
CAPN9-202ENST00000354537 STRIP2Q9ULQ0 834 aa11.98□□□□□ -0.49
CAPN9-202ENST00000354537 PCDHA10Q9Y5I2 948 aa11.98□□□□□ -0.49
CAPN9-202ENST00000354537 NUMBLQ9Y6R0 609 aa11.98□□□□□ -0.49
CAPN9-202ENST00000354537 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.97□□□□□ -0.49
CAPN9-202ENST00000354537 A0A0G2JND7 137 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 CAPN9O14815 690 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 LPXNO60711 386 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 CDH5P33151 784 aaPredicted RBP11.97□□□□□ -0.49
CAPN9-202ENST00000354537 ZBTB16Q05516 673 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 RCN2Q14257 317 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 C2CD6Q53TS8 623 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 THEMIS2Q5TEJ8 643 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 WDR78Q5VTH9 848 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 DNAJC24Q6P3W2 148 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 SH2D5Q6ZV89 423 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 BBS12Q6ZW61 710 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 NET1Q7Z628 596 aaPredicted RBP11.97□□□□□ -0.49
CAPN9-202ENST00000354537 ANKMY2Q8IV38 441 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 DHX37Q8IY37 1157 aaKnown RBP11.97□□□□□ -0.49
CAPN9-202ENST00000354537 NLGN1Q8N2Q7 840 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 CCDC110Q8TBZ0 833 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 NRG4Q8WWG1 115 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 ZNF606Q8WXB4 792 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 BICD1Q96G01 975 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 PRMT6Q96LA8 375 aaPredicted RBP11.97□□□□□ -0.49
CAPN9-202ENST00000354537 AGBL1Q96MI9 1066 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 KIFC3Q9BVG8 833 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 APOBEC3GQ9HC16 384 aaKnown RBP11.97□□□□□ -0.49
CAPN9-202ENST00000354537 PNPLA8Q9NP80 782 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 DLGAP2Q9P1A6 1054 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 TMEM150BA6NC51 233 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 C3orf70A6NLC5 250 aaPredicted RBP11.97□□□□□ -0.49
CAPN9-202ENST00000354537 ATP9AO75110 1047 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 TBX10O75333 385 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 KRT36O76013 467 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 STBD1O95210 358 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 CFHP08603 1231 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 KRT7P08729 469 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 SERPINB3P29508 390 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 TUBP50607 506 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 RPL7AP62424 266 aaKnown RBP11.97□□□□□ -0.49
CAPN9-202ENST00000354537 PLCB3Q01970 1234 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 ZNF252P-AS1Q0IIN9 211 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 PGM5Q15124 567 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 FNBP1LQ5T0N5 605 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 RINLQ6ZS11 566 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 TMEM35BQ8NCS4 154 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 FBXO36Q8NEA4 188 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 RAB3IL1Q8TBN0 382 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 SLC44A1Q8WWI5 657 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 ZBTB10Q96DT7 871 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 OXNAD1Q96HP4 312 aaPredicted RBP11.97□□□□□ -0.49
CAPN9-202ENST00000354537 CEP170P1Q96L14 293 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 C7orf26Q96N11 449 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 CGRRF1Q99675 332 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 TMEM121Q9BTD3 319 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 FRMD8Q9BZ67 464 aaPredicted RBP11.97□□□□□ -0.49
CAPN9-202ENST00000354537 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.97□□□□□ -0.49
CAPN9-202ENST00000354537 SLC17A7Q9P2U7 560 aa11.97□□□□□ -0.49
CAPN9-202ENST00000354537 LTBP4Q8N2S1 1624 aa11.96□□□□□ -0.49
CAPN9-202ENST00000354537 NFIBO00712 420 aa11.96□□□□□ -0.49
CAPN9-202ENST00000354537 SSTR1P30872 391 aa11.96□□□□□ -0.49
CAPN9-202ENST00000354537 LIG4P49917 911 aa11.96□□□□□ -0.49
CAPN9-202ENST00000354537 TRMT5Q32P41 509 aaKnown RBP11.96□□□□□ -0.49
CAPN9-202ENST00000354537 ZFYVE27Q5T4F4 411 aa11.96□□□□□ -0.49
CAPN9-202ENST00000354537 DCUN1D2Q6PH85 259 aa11.96□□□□□ -0.49
CAPN9-202ENST00000354537 TAS1R3Q7RTX0 852 aa11.96□□□□□ -0.49
CAPN9-202ENST00000354537 LRRC6Q86X45 466 aa11.96□□□□□ -0.49
CAPN9-202ENST00000354537 PASD1Q8IV76 773 aa11.96□□□□□ -0.49
CAPN9-202ENST00000354537 C8orf37Q96NL8 207 aa11.96□□□□□ -0.49
CAPN9-202ENST00000354537 ZNF184Q99676 751 aaPredicted RBP11.96□□□□□ -0.49
CAPN9-202ENST00000354537 GPAMQ9HCL2 828 aa11.96□□□□□ -0.49
CAPN9-202ENST00000354537 ETAA1Q9NY74 926 aa11.96□□□□□ -0.49
CAPN9-202ENST00000354537 C2CD2Q9Y426 696 aa11.96□□□□□ -0.49
CAPN9-202ENST00000354537 EIF4BP23588 611 aaKnown RBP11.96□□□□□ -0.5
CAPN9-202ENST00000354537 RPL22P35268 128 aaKnown RBP11.96□□□□□ -0.5
CAPN9-202ENST00000354537 PGM1P36871 562 aa11.96□□□□□ -0.5
CAPN9-202ENST00000354537 RFC5P40937 340 aa11.96□□□□□ -0.5
CAPN9-202ENST00000354537 RAB27AP51159 221 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms