RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 MTMR12Q9C0I1 747 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 ROPN1Q9HAT0 212 aaPredicted RBP9.09□□□□□ -0.95
TRIM55-204ENST00000353317 MLXIPLQ9NP71 852 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 FGFR1OP2Q9NVK5 253 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 PRMT7Q9NVM4 692 aaPredicted RBP9.09□□□□□ -0.95
TRIM55-204ENST00000353317 TMEM120BA0PK00 339 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 TCP11X1B4DZS4 312 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 ECEL1O95672 775 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 RARBP10826 455 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 ABCD1P33897 745 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 CHKAP35790 457 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 KCNJ2P63252 427 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 NKX3-2P78367 333 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 FMO1Q01740 532 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 CALCOCO2Q13137 446 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 SLC10A6Q3KNW5 377 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 LHX8Q68G74 356 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 TLDC1Q6P9B6 456 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 VSTM1Q6UX27 236 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 TRMT10CQ7L0Y3 403 aaKnown RBP9.09□□□□□ -0.95
TRIM55-204ENST00000353317 PPM1KQ8N3J5 372 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 C12orf50Q8NA57 414 aaPredicted RBP9.09□□□□□ -0.95
TRIM55-204ENST00000353317 CXorf38Q8TB03 319 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 DYDC1Q8WWB3 177 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 C1orf54Q8WWF1 131 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 NSRP1Q9H0G5 558 aaKnown RBP9.09□□□□□ -0.95
TRIM55-204ENST00000353317 LRRC19Q9H756 370 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 KIAA1586Q9HCI6 787 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 HOMER3Q9NSC5 361 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 CTNNAL1Q9UBT7 734 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 NUB1Q9Y5A7 615 aa9.09□□□□□ -0.95
TRIM55-204ENST00000353317 C17orf102A2RUQ5 167 aa9.08□□□□□ -0.96
TRIM55-204ENST00000353317 LACTBL1A8MY62 500 aa9.08□□□□□ -0.96
TRIM55-204ENST00000353317 LDHAP00338 332 aaKnown RBP9.08□□□□□ -0.96
TRIM55-204ENST00000353317 NFICP08651 508 aa9.08□□□□□ -0.96
TRIM55-204ENST00000353317 RPSAP08865 295 aaKnown RBP9.08□□□□□ -0.96
TRIM55-204ENST00000353317 STAG3L1P0CL83 205 aa9.08□□□□□ -0.96
TRIM55-204ENST00000353317 SCP2P22307 547 aa9.08□□□□□ -0.96
TRIM55-204ENST00000353317 RWDD2BP57060 319 aa9.08□□□□□ -0.96
TRIM55-204ENST00000353317 NCALDP61601 193 aa9.08□□□□□ -0.96
TRIM55-204ENST00000353317 SNX1Q13596 522 aa9.08□□□□□ -0.96
TRIM55-204ENST00000353317 ZNF268Q14587 947 aaPredicted RBP9.08□□□□□ -0.96
TRIM55-204ENST00000353317 SNX17Q15036 470 aa9.08□□□□□ -0.96
TRIM55-204ENST00000353317 RHBDF2Q6PJF5 856 aa9.08□□□□□ -0.96
TRIM55-204ENST00000353317 C7orf31Q8N865 590 aa9.08□□□□□ -0.96
TRIM55-204ENST00000353317 FNBP1Q96RU3 617 aa9.08□□□□□ -0.96
TRIM55-204ENST00000353317 CGRRF1Q99675 332 aa9.08□□□□□ -0.96
TRIM55-204ENST00000353317 GTF2IRD1Q9UHL9 959 aa9.08□□□□□ -0.96
TRIM55-204ENST00000353317 L3MBTL1Q9Y468 752 aa9.08□□□□□ -0.96
TRIM55-204ENST00000353317 USP15Q9Y4E8 981 aaPredicted RBP9.08□□□□□ -0.96
TRIM55-204ENST00000353317 CFAP73A6NFT4 308 aa9.08□□□□□ -0.96
TRIM55-204ENST00000353317 CYP1A2P05177 515 aa9.08□□□□□ -0.96
TRIM55-204ENST00000353317 DARSP14868 501 aaKnown RBP9.08□□□□□ -0.96
TRIM55-204ENST00000353317 GTF2H1P32780 548 aa9.08□□□□□ -0.96
TRIM55-204ENST00000353317 KRT17Q04695 432 aa9.08□□□□□ -0.96
TRIM55-204ENST00000353317 RIPK1Q13546 671 aa9.08□□□□□ -0.96
TRIM55-204ENST00000353317 MPP2Q14168 576 aa9.08□□□□□ -0.96
TRIM55-204ENST00000353317 GALNTL6Q49A17 601 aa9.08□□□□□ -0.96
TRIM55-204ENST00000353317 NUGGCQ68CJ6 796 aa9.08□□□□□ -0.96
TRIM55-204ENST00000353317 REM2Q8IYK8 340 aaPredicted RBP9.08□□□□□ -0.96
TRIM55-204ENST00000353317 ZNF653Q96CK0 615 aa9.08□□□□□ -0.96
TRIM55-204ENST00000353317 STAMBPL1Q96FJ0 436 aa9.08□□□□□ -0.96
TRIM55-204ENST00000353317 SERPINB12Q96P63 405 aa9.08□□□□□ -0.96
TRIM55-204ENST00000353317 MTG1Q9BT17 334 aaPredicted RBP9.08□□□□□ -0.96
TRIM55-204ENST00000353317 CHST7Q9NS84 486 aa9.08□□□□□ -0.96
TRIM55-204ENST00000353317 DNAJC17Q9NVM6 304 aaKnown RBP9.08□□□□□ -0.96
TRIM55-204ENST00000353317 DONSONQ9NYP3 566 aa9.08□□□□□ -0.96
TRIM55-204ENST00000353317 SUFUQ9UMX1 484 aa9.08□□□□□ -0.96
TRIM55-204ENST00000353317 MYCP01106 439 aaPredicted RBP9.07□□□□□ -0.96
TRIM55-204ENST00000353317 CHRNA1P02708 482 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 HMGCRP04035 888 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 INHAP05111 366 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 CFHP08603 1231 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 CYP11B1P15538 503 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 NQO1P15559 274 aaKnown RBP9.07□□□□□ -0.96
TRIM55-204ENST00000353317 EIF4BP23588 611 aaKnown RBP9.07□□□□□ -0.96
TRIM55-204ENST00000353317 IVDP26440 423 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 MYL6P60660 151 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 TMEM132AQ24JP5 1023 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 SGO2Q562F6 1265 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 ZNF410Q86VK4 478 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 RAET1EQ8TD07 263 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 SH3TC2Q8TF17 1288 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 ATG4AQ8WYN0 398 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 SHC3Q92529 594 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 SLCO2A1Q92959 643 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 VTI1AQ96AJ9 217 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 RNF39Q9H2S5 420 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 EBF2Q9HAK2 575 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 WHRNQ9P202 907 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 SIX4Q9UIU6 781 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 GTF3C4Q9UKN8 822 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 PTCH2Q9Y6C5 1203 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 PDCD11Q14690 1871 aaKnown RBP9.07□□□□□ -0.96
TRIM55-204ENST00000353317 FSCN2O14926 492 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 ACO1P21399 889 aaKnown RBP9.07□□□□□ -0.96
TRIM55-204ENST00000353317 BNIP1Q12981 228 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 TRIP13Q15645 432 aaPredicted RBP9.07□□□□□ -0.96
TRIM55-204ENST00000353317 KYNUQ16719 465 aa9.07□□□□□ -0.96
TRIM55-204ENST00000353317 JADE1Q6IE81 842 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms