RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 CBWD1Q9BRT8 395 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 FOXP3Q9BZS1 431 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 Q9H521 79 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 OLFML3Q9NRN5 406 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 HSFX1Q9UBD0 423 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 ZBTB21Q9ULJ3 1066 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 DTNAQ9Y4J8 743 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 MYOCOSA0A1B0GUC4 107 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 BOLA2-SMG1P6H3BVE0 249 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 C6orf222P0C671 652 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-201ENST00000352993 CYTH1Q15438 398 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 KLHL38Q2WGJ6 581 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 NADK2Q4G0N4 442 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 ANKRD20A4Q4UJ75 823 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 CC2D2BQ6DHV5 1058 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 TDRPQ86YL5 185 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 CRLF3Q8IUI8 442 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 FBXO36Q8NEA4 188 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 NT5C1BQ96P26 610 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 YIPF2Q9BWQ6 316 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 APOL6Q9BWW8 343 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 KCNK13Q9HB14 408 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 IFT122Q9HBG6 1241 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 PACSIN3Q9UKS6 424 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 SH3GLB1Q9Y371 365 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 IQANK1A0A1B0GTG1 560 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 TOM1L1O75674 476 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 SLC18A1P54219 525 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 NCKAP1LP55160 1127 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 TAS2R40P59535 323 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 BASP1P80723 227 aaKnown RBP7.99□□□□□ -1.13
BRCA1-201ENST00000352993 GAD2Q05329 585 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 CHI3L2Q15782 390 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 SH3D19Q5HYK7 790 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 LIN9Q5TKA1 542 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 PPP1R18Q6NYC8 613 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 SMIM5Q71RC9 77 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 ANKS1BQ7Z6G8 1248 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 GALNT4Q8N4A0 578 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 FAM172AQ8WUF8 416 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 ALKBH8Q96BT7 664 aaKnown RBP7.99□□□□□ -1.13
BRCA1-201ENST00000352993 KREMEN1Q96MU8 473 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 SH2D3AQ9BRG2 576 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 CIDEBQ9UHD4 219 aa7.99□□□□□ -1.13
BRCA1-201ENST00000352993 NOCTQ9UK39 431 aaKnown RBP7.99□□□□□ -1.13
BRCA1-201ENST00000352993 E5RJQ4 531 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 FAM86B1E9PN63 330 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 C6orf229H3BNL8 230 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 STRNO43815 780 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 MTA2O94776 668 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 FAM86B2P0C5J1 330 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 FDX1P10109 184 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 ATXN3P54252 364 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-201ENST00000352993 PDE1BQ01064 536 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 ITGA9Q13797 1035 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 KRT81Q14533 505 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 RALGPS1Q5JS13 557 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 PTF1AQ7RTS3 328 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 NUDCD3Q8IVD9 361 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 TRIML2Q8N7C3 387 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 ZBTB8BQ8NAP8 495 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-201ENST00000352993 VTI1AQ96AJ9 217 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 PI4K2AQ9BTU6 479 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 PFDN4Q9NQP4 134 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 ADAMTS6Q9UKP5 1117 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 SOX13Q9UN79 622 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 AGTPBP1Q9UPW5 1226 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 ALOX15BO15296 676 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 MSH4O15457 936 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 SORBS2O94875 1100 aaKnown RBP7.98□□□□□ -1.13
BRCA1-201ENST00000352993 NCF2P19878 526 aaPredicted RBP7.98□□□□□ -1.13
BRCA1-201ENST00000352993 GLRA2P23416 452 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 CLK2P49760 499 aaKnown RBP7.98□□□□□ -1.13
BRCA1-201ENST00000352993 FAAP100Q0VG06 881 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 ALCAMQ13740 583 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 FAM182AQ5T1J6 154 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 SEPT12Q8IYM1 358 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 PPM1NQ8N819 430 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 ARL10Q8N8L6 244 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 BANPQ8N9N5 519 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 ZSWIM2Q8NEG5 633 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 E2F7Q96AV8 911 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 INPP5FQ9Y2H2 1132 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 NUP98P52948 1817 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 TLR3O15455 904 aaKnown RBP7.98□□□□□ -1.13
BRCA1-201ENST00000352993 PROCP04070 461 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 CDK4P11802 303 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 MLH1P40692 756 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 NT5C2P49902 561 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 CCR3P51677 355 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 BST1Q10588 318 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 NFX1Q12986 1120 aaKnown RBP7.98□□□□□ -1.13
BRCA1-201ENST00000352993 MTA1Q13330 715 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 MORF4L2Q15014 288 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 TMCO4Q5TGY1 634 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 ATG16L1Q676U5 607 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 ZCCHC23Q6ZST2 131 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 DENND5BQ6ZUT9 1274 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 FAM71AQ8IYT1 594 aa7.98□□□□□ -1.13
BRCA1-201ENST00000352993 PDIK1LQ8N165 341 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms