RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 CDY2AQ9Y6F7 541 aa7.31□□□□□ -1.24
TRIM55-203ENST00000350034 GRIN2DO15399 1336 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 RALGAPA2Q2PPJ7 1873 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 SCN10AQ9Y5Y9 1956 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 GOLGA6BA6NDN3 693 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 C3orf70A6NLC5 250 aaPredicted RBP7.3□□□□□ -1.24
TRIM55-203ENST00000350034 H0YGN5 161 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 M0QYV0 167 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 DPYSL4O14531 572 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 PTGESO14684 152 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 SPTLC1O15269 473 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 POLR3GO15318 223 aaPredicted RBP7.3□□□□□ -1.24
TRIM55-203ENST00000350034 PPFIA2O75334 1257 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 GABBR2O75899 941 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 CHRNA1P02708 482 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 RALAP11233 206 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 KRT3P12035 628 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 TCF4P15884 667 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 ATF7P17544 494 aaPredicted RBP7.3□□□□□ -1.24
TRIM55-203ENST00000350034 AKAP5P24588 427 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 FLT3P36888 993 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 SLC25A11Q02978 314 aaKnown RBP7.3□□□□□ -1.24
TRIM55-203ENST00000350034 SOX4Q06945 474 aaPredicted RBP7.3□□□□□ -1.24
TRIM55-203ENST00000350034 NFX1Q12986 1120 aaKnown RBP7.3□□□□□ -1.24
TRIM55-203ENST00000350034 HLTFQ14527 1009 aaKnown RBP eCLIP7.3□□□□□ -1.24
TRIM55-203ENST00000350034 DSC3Q14574 896 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 ACAP1Q15027 740 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 UAP1Q16222 522 aaPredicted RBP7.3□□□□□ -1.24
TRIM55-203ENST00000350034 CCNG2Q16589 344 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 ATP13A4Q4VNC1 1196 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 HSP90B2PQ58FF3 399 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 FAM26DQ5JW98 314 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 GLRA4Q5JXX5 417 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 FBXO47Q5MNV8 452 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 MAP3K21Q5TCX8 1036 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 DAB2IPQ5VWQ8 1189 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 CYP4F22Q6NT55 531 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 DRICH1Q6PGQ1 229 aaPredicted RBP7.3□□□□□ -1.24
TRIM55-203ENST00000350034 DCUN1D2Q6PH85 259 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 LRIG3Q6UXM1 1119 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 DPH6Q7L8W6 267 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 MRPL10Q7Z7H8 261 aaKnown RBP7.3□□□□□ -1.24
TRIM55-203ENST00000350034 TMEM110Q86TL2 294 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 RSPH3Q86UC2 560 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 TTC30AQ86WT1 665 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 GSTCDQ8NEC7 633 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 JOSD2Q8TAC2 188 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 SP7Q8TDD2 431 aaPredicted RBP7.3□□□□□ -1.24
TRIM55-203ENST00000350034 SLC35F5Q8WV83 523 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 KBTBD7Q8WVZ9 684 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 LRRC45Q96CN5 670 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 RBM41Q96IZ5 413 aaKnown RBP7.3□□□□□ -1.24
TRIM55-203ENST00000350034 ZNF560Q96MR9 790 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 SLITRK1Q96PX8 696 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 PPP1R10Q96QC0 940 aaKnown RBP7.3□□□□□ -1.24
TRIM55-203ENST00000350034 TRAIPQ9BWF2 469 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 OSBPL8Q9BZF1 889 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 TRIM6Q9C030 488 aaPredicted RBP7.3□□□□□ -1.24
TRIM55-203ENST00000350034 MIS12Q9H081 205 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 SPC25Q9HBM1 224 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 CHST7Q9NS84 486 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 RNF186Q9NXI6 227 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 DDX56Q9NY93 547 aaKnown RBP7.3□□□□□ -1.24
TRIM55-203ENST00000350034 TSPAN16Q9UKR8 245 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 EFR3BQ9Y2G0 817 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 R3HDM2Q9Y2K5 976 aaKnown RBP7.3□□□□□ -1.24
TRIM55-203ENST00000350034 FAN1Q9Y2M0 1017 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.3□□□□□ -1.24
TRIM55-203ENST00000350034 SNX9Q9Y5X1 595 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 NFS1Q9Y697 457 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 MGAMO43451 1857 aa7.3□□□□□ -1.24
TRIM55-203ENST00000350034 hCG_1818297A0A087WSY0 165 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 C2CD4BA6NLJ0 364 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 KPNA7A9QM74 516 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 GOLGA8SH3BPF8 625 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 M0QZ92 97 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 TP73O15350 636 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 OPA1O60313 960 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 HSF2BPO75031 334 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 ZNF623O75123 536 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 RNF40O75150 1001 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 LRCH4O75427 683 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 ENDOD1O94919 500 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 ECEL1O95672 775 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 KRT1P04264 644 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 FGFR1P11362 822 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 WARSP23381 471 aaKnown RBP7.29□□□□□ -1.24
TRIM55-203ENST00000350034 PSMA2P25787 234 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 IVDP26440 423 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 IL1R2P27930 398 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 CCND3P30281 292 aaPredicted RBP7.29□□□□□ -1.24
TRIM55-203ENST00000350034 PCK1P35558 622 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 HSD17B3P37058 310 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 SCNN1AP37088 669 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 CETN2P41208 172 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 CDKN2BP42772 138 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 RPL21P46778 160 aaKnown RBP7.29□□□□□ -1.24
TRIM55-203ENST00000350034 KCNJ1P48048 391 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 TAF6P49848 677 aa7.29□□□□□ -1.24
TRIM55-203ENST00000350034 ZNF143P52747 638 aaPredicted RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms