RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 SF3B3Q15393 1217 aaKnown RBP8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 PPP1R7Q15435 360 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 SPA17Q15506 151 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 CDC37Q16543 378 aaPredicted RBP8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 MEA1Q16626 185 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 ZNF827Q17R98 1081 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 ACCSLQ4AC99 568 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 CMPK2Q5EBM0 449 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 KCTD16Q68DU8 428 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 SDE2Q6IQ49 451 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 KLHL10Q6JEL2 608 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 HIBCHQ6NVY1 386 aaPredicted RBP8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 MAATS1Q7Z4T9 603 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 ZC3H7AQ8IWR0 971 aaKnown RBP8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 MB21D2Q8IYB1 491 aaPredicted RBP8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 CCT6BQ92526 530 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 STAMBPL1Q96FJ0 436 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 ORAI3Q9BRQ5 295 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 SUDS3Q9H7L9 328 aaPredicted RBP8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 PPANQ9NQ55 473 aaKnown RBP8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 RMND1Q9NWS8 449 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 CHCHD3Q9NX63 227 aaKnown RBP8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 AATFQ9NY61 560 aaKnown RBP eCLIP8.29□□□□□ -1.086e-12■■□□□ 12.2
UBE2D3-204ENST00000349311 RGL1Q9NZL6 768 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 SRPK3Q9UPE1 567 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 NIP7Q9Y221 180 aaKnown RBP eCLIP8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 KCTD3Q9Y597 815 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 SRPRBQ9Y5M8 271 aaKnown RBP8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 IRAK3Q9Y616 596 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 MYH4Q9Y623 1939 aa8.29□□□□□ -1.08
UBE2D3-204ENST00000349311 LRRD1A4D1F6 860 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 H7C1D1 291 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 MAN2B1O00754 1011 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 ORC4O43929 436 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 COQ9O75208 318 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 SKAP2O75563 359 aaPredicted RBP8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 SRGAP2CP0DJJ0 459 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 PDE6AP16499 860 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 HSD3B2P26439 372 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 EEF1GP26641 437 aaKnown RBP8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 IGFALSP35858 605 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 CCT6AP40227 531 aaKnown RBP8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 METAP2P50579 478 aaKnown RBP eCLIP8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 PAPOLAP51003 745 aaKnown RBP8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 CCNG1P51959 295 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 STX17P56962 302 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 JAM2P57087 298 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 UBXN1Q04323 297 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 TFCP2Q12800 502 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 PKN1Q16512 942 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 CCDC152Q4G0S7 254 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 CFAP221Q4G0U5 840 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 TCP11X2Q5H9J9 407 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 FAM47CQ5HY64 1035 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 ZCCHC8Q6NZY4 707 aaKnown RBP8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 HHIPL2Q6UWX4 724 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 KCTD1Q719H9 257 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 OTOP1Q7RTM1 612 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 CPLX4Q7Z7G2 160 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 OSTM1Q86WC4 334 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 PROSER1Q86XN7 944 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 NOSTRINQ8IVI9 506 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 RBM12BQ8IXT5 1001 aaKnown RBP8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 LMNTD2Q8IXW0 634 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 KLHDC4Q8TBB5 520 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 THOC1Q96FV9 657 aaKnown RBP8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 BICD1Q96G01 975 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 CHP1Q99653 195 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 YIPF3Q9GZM5 350 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 NSRP1Q9H0G5 558 aaKnown RBP8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 VPS16Q9H269 839 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 NDST4Q9H3R1 872 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 NGRNQ9NPE2 291 aaKnown RBP8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 TAB2Q9NYJ8 693 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 CTNNAL1Q9UBT7 734 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 TRIM10Q9UDY6 481 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 DBNLQ9UJU6 430 aaKnown RBP8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 WASF3Q9UPY6 502 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 MROH5Q6ZUA9 1318 aa8.28□□□□□ -1.08
UBE2D3-204ENST00000349311 KIF13BQ9NQT8 1826 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 ENO4A6NNW6 628 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 LGALS16A8MUM7 142 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 NPIPB6E9PJ23 425 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 ZNF185O15231 689 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 ASAP2O43150 1006 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 PPFIA2O75334 1257 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 LTFP02788 710 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 ZFYP08048 801 aaPredicted RBP8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 DRD4P21917 467 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 CFPP27918 469 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 CNGA1P29973 690 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 IARSP41252 1262 aaKnown RBP8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 MAGEA8P43361 318 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 DNM2P50570 870 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 ZNF131P52739 623 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 TNNC1P63316 161 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 MRPS35P82673 323 aaKnown RBP8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 ZBED6P86452 979 aa8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 DLX2Q07687 328 aaPredicted RBP8.27□□□□□ -1.09
UBE2D3-204ENST00000349311 TUSC3Q13454 348 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms