RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 TBCCQ15814 346 aa10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 CEP55Q53EZ4 464 aa10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 HSP90AA5PQ58FG0 334 aa10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 C1orf146Q5VVC0 180 aa10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 ACAD10Q6JQN1 1059 aa10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 KLHDC10Q6PID8 442 aa10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 C1orf228Q6PIY5 440 aa10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 RBM44Q6ZP01 1051 aaKnown RBP10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 CENPUQ71F23 418 aa10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 ENOSF1Q7L5Y1 443 aa10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 SLC51AQ86UW1 340 aa10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 PASD1Q8IV76 773 aa10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 ARHGEF19Q8IW93 802 aa10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 MAP7D3Q8IWC1 876 aa10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 MZB1Q8WU39 189 aa10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 DNAJC1Q96KC8 554 aaKnown RBP10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 CYTH2Q99418 400 aa10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 DHRS4Q9BTZ2 278 aa10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 WDR18Q9BV38 432 aa10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 ZC3H12CQ9C0D7 883 aaKnown RBP10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 VPS37BQ9H9H4 285 aa10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 TUBGCP4Q9UGJ1 667 aa10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 DMTF1Q9Y222 760 aa10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 RGPD3A6NKT7 1758 aaPredicted RBP10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 RGPD4Q7Z3J3 1758 aa10.82□□□□□ -0.68
CHRNA1-202ENST00000348749 WDR91A4D1P6 747 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 SPECC1L-ADORA2AF8WAN1 911 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 KLF11O14901 512 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 BIRC5O15392 142 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 PEX1O43933 1283 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 SGPL1O95470 568 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 POLR2MP0CAP2 368 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 MYL2P10916 166 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 EIF4BP23588 611 aaKnown RBP10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 POLD1P28340 1107 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 CRKP46108 304 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 IRX4P78413 519 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 FMO1Q01740 532 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 CDK18Q07002 472 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 PPP3CAQ08209 521 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 LLGL1Q15334 1064 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 FAM98CQ17RN3 349 aaKnown RBP10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 ABCB5Q2M3G0 1257 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 PPP1R2P3Q6NXS1 205 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 BORAQ6PGQ7 559 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 ADGRD1Q6QNK2 874 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 NIPA1Q7RTP0 329 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 USP37Q86T82 979 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 AMIGO3Q86WK7 504 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 ZNF677Q86XU0 584 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 ZBED8Q8IZ13 594 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 NUP93Q8N1F7 819 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 DHX38Q92620 1227 aaKnown RBP10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 SLC35B4Q969S0 331 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 ZFRQ96KR1 1074 aaKnown RBP10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 THTPAQ9BU02 230 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 DEFB129Q9H1M3 183 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 KCNK4Q9NYG8 393 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 BTBD7Q9P203 1132 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 TELO2Q9Y4R8 837 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 THSD7AQ9UPZ6 1657 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 ZNFX1Q9P2E3 1918 aaKnown RBP10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 C15orf38-AP3S2A0A0A6YYH1 394 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 K7ENM7 598 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 CASQ2O14958 399 aaPredicted RBP10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 PLA2G6O60733 806 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 LYPLA2O95372 231 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 TFAP2AP05549 437 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 ENO1P06733 434 aaKnown RBP10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 VIL1P09327 827 aaKnown RBP10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 MAPK4P31152 587 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 STIP1P31948 543 aaKnown RBP10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 CPA2P48052 419 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 GPC3P51654 580 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 AQP4P55087 323 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 GTF2BQ00403 316 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 IKQ13123 557 aaPredicted RBP10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 FASTKD3Q14CZ7 662 aaKnown RBP10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 MORF4L2Q15014 288 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 MMEL1Q495T6 779 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 C1orf220Q5T0J3 134 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 ARPINQ7Z6K5 226 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 TREML1Q86YW5 311 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 DAW1Q8N136 415 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 MARVELD2Q8N4S9 558 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 CYP2W1Q8TAV3 490 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 JADE3Q92613 823 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 BCAS3Q9H6U6 928 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 SLC17A7Q9P2U7 560 aa10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 MRPL11Q9Y3B7 192 aaKnown RBP10.81□□□□□ -0.68
CHRNA1-202ENST00000348749 ZC3H11AO75152 810 aaKnown RBP eCLIP10.8□□□□□ -0.68
CHRNA1-202ENST00000348749 RALAP11233 206 aa10.8□□□□□ -0.68
CHRNA1-202ENST00000348749 CYP11B1P15538 503 aa10.8□□□□□ -0.68
CHRNA1-202ENST00000348749 ZFXP17010 805 aaPredicted RBP10.8□□□□□ -0.68
CHRNA1-202ENST00000348749 HMGB2P26583 209 aaKnown RBP10.8□□□□□ -0.68
CHRNA1-202ENST00000348749 ETV4P43268 484 aa10.8□□□□□ -0.68
CHRNA1-202ENST00000348749 NFIAQ12857 509 aa10.8□□□□□ -0.68
CHRNA1-202ENST00000348749 DLG1Q12959 904 aa10.8□□□□□ -0.68
CHRNA1-202ENST00000348749 TMED1Q13445 227 aa10.8□□□□□ -0.68
CHRNA1-202ENST00000348749 CC2D2BQ6DHV5 1058 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms