RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 POLR3CQ9BUI4 534 aaPredicted RBP16.07■□□□□ 0.16
LMNA-201ENST00000347559 CIDEBQ9UHD4 219 aa16.07■□□□□ 0.16
LMNA-201ENST00000347559 APPL1Q9UKG1 709 aa16.07■□□□□ 0.16
LMNA-201ENST00000347559 MAST2Q6P0Q8 1798 aa16.07■□□□□ 0.16
LMNA-201ENST00000347559 ARFGEF1Q9Y6D6 1849 aa16.06■□□□□ 0.16
LMNA-201ENST00000347559 MYH11P35749 1972 aa16.06■□□□□ 0.16
LMNA-201ENST00000347559 TGDSO95455 350 aa16.06■□□□□ 0.16
LMNA-201ENST00000347559 NFX1Q12986 1120 aaKnown RBP16.06■□□□□ 0.16
LMNA-201ENST00000347559 MORF4L2Q15014 288 aa16.06■□□□□ 0.16
LMNA-201ENST00000347559 ANKRD20A4Q4UJ75 823 aa16.06■□□□□ 0.16
LMNA-201ENST00000347559 FNBP1LQ5T0N5 605 aa16.06■□□□□ 0.16
LMNA-201ENST00000347559 IYDQ6PHW0 289 aa16.06■□□□□ 0.16
LMNA-201ENST00000347559 ADGRD1Q6QNK2 874 aa16.06■□□□□ 0.16
LMNA-201ENST00000347559 MBOAT7Q96N66 472 aa16.06■□□□□ 0.16
LMNA-201ENST00000347559 GPAMQ9HCL2 828 aa16.06■□□□□ 0.16
LMNA-201ENST00000347559 TOPORSQ9NS56 1045 aaPredicted RBP16.06■□□□□ 0.16
LMNA-201ENST00000347559 PROSCO94903 275 aa16.06■□□□□ 0.16
LMNA-201ENST00000347559 DYNLT1P63172 113 aa16.06■□□□□ 0.16
LMNA-201ENST00000347559 PTK7Q13308 1070 aa16.06■□□□□ 0.16
LMNA-201ENST00000347559 RNASEH2BQ5TBB1 312 aaKnown RBP16.06■□□□□ 0.16
LMNA-201ENST00000347559 ANKRD22Q5VYY1 191 aa16.06■□□□□ 0.16
LMNA-201ENST00000347559 OGFOD1Q8N543 542 aa16.06■□□□□ 0.16
LMNA-201ENST00000347559 LZICQ8WZA0 190 aa16.06■□□□□ 0.16
LMNA-201ENST00000347559 SSU72Q9NP77 194 aaKnown RBP16.06■□□□□ 0.16
LMNA-201ENST00000347559 NDUFA13Q9P0J0 144 aa16.06■□□□□ 0.16
LMNA-201ENST00000347559 BTBD7Q9P203 1132 aa16.06■□□□□ 0.16
LMNA-201ENST00000347559 C6orf229H3BNL8 230 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 NSFP46459 744 aaKnown RBP16.05■□□□□ 0.16
LMNA-201ENST00000347559 RPL5P46777 297 aaKnown RBP16.05■□□□□ 0.16
LMNA-201ENST00000347559 FAAP100Q0VG06 881 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 SLC15A2Q16348 729 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 ZNF554Q86TJ5 538 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 PRICKLE1Q96MT3 831 aaPredicted RBP16.05■□□□□ 0.16
LMNA-201ENST00000347559 HSPBP1Q9NZL4 362 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.05■□□□□ 0.16
LMNA-201ENST00000347559 SAE1Q9UBE0 346 aaPredicted RBP16.05■□□□□ 0.16
LMNA-201ENST00000347559 DNAJB4Q9UDY4 337 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 LZTS1Q9Y250 596 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 A0A088AWK7 358 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 LOC102724428A0A0B4J2F2 783 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 TBX3O15119 743 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 GRIN3BO60391 1043 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 KRT1P04264 644 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 TFAP2AP05549 437 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 TCF4P15884 667 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 RAG1P15918 1043 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 ADRA2BP18089 450 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 PCSK6P29122 969 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 PMLP29590 882 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 SIK1P57059 783 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 BST1Q10588 318 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 GRM2Q14416 872 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 HSF5Q4G112 596 aaPredicted RBP16.05■□□□□ 0.16
LMNA-201ENST00000347559 SH3D19Q5HYK7 790 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 TCHHL1Q5QJ38 904 aaPredicted RBP16.05■□□□□ 0.16
LMNA-201ENST00000347559 XXYLT1Q8NBI6 393 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 ZFP28Q8NHY6 868 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.05■□□□□ 0.16
LMNA-201ENST00000347559 DCAKDQ8WVC6 231 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 ALKBH8Q96BT7 664 aaKnown RBP16.05■□□□□ 0.16
LMNA-201ENST00000347559 YIPF2Q9BWQ6 316 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 WWP1Q9H0M0 922 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 PCDHGB4Q9UN71 923 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 PCDHGB5Q9Y5G0 923 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 SPATA31A5Q5VU36 1347 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 SPATA31A6Q5VVP1 1343 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 SPATA31A7Q8IWB4 1347 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 ARHGEF35A5YM69 484 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 BOLA2-SMG1P6H3BVE0 249 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 ITGA9Q13797 1035 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 ACAP1Q15027 740 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 LRRC8BQ6P9F7 803 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 UGT2A3Q6UWM9 527 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 MFSD7Q6UXD7 560 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 ALLCQ8N6M5 410 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 DDX1Q92499 740 aaKnown RBP16.05■□□□□ 0.16
LMNA-201ENST00000347559 NT5C1BQ96P26 610 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 HSD17B14Q9BPX1 270 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 SIKE1Q9BRV8 207 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 SLC13A1Q9BZW2 595 aa16.05■□□□□ 0.16
LMNA-201ENST00000347559 WRAP73Q9P2S5 460 aaPredicted RBP16.05■□□□□ 0.16
LMNA-201ENST00000347559 SHANK3Q9BYB0 1731 aa16.04■□□□□ 0.16
LMNA-201ENST00000347559 SMIM18P0DKX4 95 aa16.04■□□□□ 0.16
LMNA-201ENST00000347559 DCTN2Q13561 401 aaKnown RBP16.04■□□□□ 0.16
LMNA-201ENST00000347559 KLHL38Q2WGJ6 581 aa16.04■□□□□ 0.16
LMNA-201ENST00000347559 CBWD2Q8IUF1 395 aa16.04■□□□□ 0.16
LMNA-201ENST00000347559 METTL25Q8N6Q8 603 aa16.04■□□□□ 0.16
LMNA-201ENST00000347559 EBF4Q9BQW3 602 aa16.04■□□□□ 0.16
LMNA-201ENST00000347559 GLT8D2Q9H1C3 349 aa16.04■□□□□ 0.16
LMNA-201ENST00000347559 RAB20Q9NX57 234 aa16.04■□□□□ 0.16
LMNA-201ENST00000347559 TMOD2Q9NZR1 351 aa16.04■□□□□ 0.16
LMNA-201ENST00000347559 SEL1LQ9UBV2 794 aa16.04■□□□□ 0.16
LMNA-201ENST00000347559 SOX13Q9UN79 622 aa16.04■□□□□ 0.16
LMNA-201ENST00000347559 DDX39AO00148 427 aaKnown RBP16.04■□□□□ 0.16
LMNA-201ENST00000347559 COPEO14579 308 aa16.04■□□□□ 0.16
LMNA-201ENST00000347559 TRPA1O75762 1119 aa16.04■□□□□ 0.16
LMNA-201ENST00000347559 INHBAP08476 426 aa16.04■□□□□ 0.16
LMNA-201ENST00000347559 NOVP48745 357 aa16.04■□□□□ 0.16
LMNA-201ENST00000347559 RHBDL3P58872 404 aa16.04■□□□□ 0.16
LMNA-201ENST00000347559 IRX4P78413 519 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms