RNA–Protein interactions for RNA: ENST00000345990.8

CSNK1G3-201, Transcript of casein kinase 1 gamma 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSNK1G3, Length 4,635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-201ENST00000345990 SF3B1O75533 1304 aaKnown RBP eCLIP14.36□□□□□ -0.113e-6■■■■■ 67.9
CSNK1G3-201ENST00000345990 TISP43B9A030 160 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 CNMDO75829 334 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 INHBAP08476 426 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 PDK1Q15118 436 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 LRRC8DQ7L1W4 858 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 FAM71BQ8TC56 605 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 ATRIPQ8WXE1 791 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 KRT35Q92764 455 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 HEMGNQ9BXL5 484 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 HIPK3Q9H422 1215 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 IPPQ9Y573 584 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 NCK2O43639 380 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 BUB1BO60566 1050 aaPredicted RBP14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 ERBB2P04626 1255 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 NFICP08651 508 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 KCNMA1Q12791 1236 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 DCAF6Q58WW2 860 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 FAF2Q96CS3 445 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 ZNF558Q96NG5 402 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 TSPAN16Q9UKR8 245 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 MAGED2Q9UNF1 606 aaPredicted RBP14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 SQORQ9Y6N5 450 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 A0A1B0GUA9 196 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 PLEKP08567 350 aaPredicted RBP14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 PAMP19021 973 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 RAD51Q06609 339 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 DHX9Q08211 1270 aaKnown RBP14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 CDCA2Q69YH5 1023 aaPredicted RBP14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 TAPT1Q6NXT6 567 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 FAM117BQ6P1L5 589 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 CPLX4Q7Z7G2 160 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 RNF186Q9NXI6 227 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 HEY1Q9Y5J3 304 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 LAMB1P07942 1786 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 TRIM66O15016 1216 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 KPNA2P52292 529 aaKnown RBP14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 LAMB3Q13751 1172 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 E2F5Q15329 346 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 CCL14Q16627 93 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 CTU1Q7Z7A3 348 aaKnown RBP14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 DAW1Q8N136 415 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 SNF8Q96H20 258 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 KRT82Q9NSB4 513 aa14.35□□□□□ -0.11
CSNK1G3-201ENST00000345990 B4GALT5O43286 388 aa14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 FNTAP49354 379 aa14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 HARS2P49590 506 aaKnown RBP14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 EPHB3P54753 998 aa14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 DLG4P78352 724 aa14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 P3H1Q32P28 736 aa14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 MORN1Q5T089 497 aa14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 EPS8L1Q8TE68 723 aa14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 EMILIN2Q9BXX0 1053 aa14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 TRPM5Q9NZQ8 1165 aa14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 MLH1P40692 756 aa14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 SCNN1GP51170 649 aa14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 ZNF211Q13398 564 aaPredicted RBP14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 MDH1BQ5I0G3 518 aa14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 FYB2Q5VWT5 728 aa14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 SP110Q9HB58 689 aa14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 UXTQ9UBK9 157 aaPredicted RBP14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 NCAM1P13591 858 aa14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 ACO1P21399 889 aaKnown RBP14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 GTF2F1P35269 517 aaKnown RBP eCLIP14.34□□□□□ -0.116e-7■■■■■ 27.9
CSNK1G3-201ENST00000345990 EIF3EP60228 445 aaKnown RBP14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 TARBP2Q15633 366 aaKnown RBP14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 PAPD7Q5XG87 772 aaKnown RBP14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 ANKS3Q6ZW76 656 aa14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 EXD1Q8NHP7 514 aa14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 SLC7A14Q8TBB6 771 aa14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 BAP1Q92560 729 aa14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 IGKV6D-21A0A0A0MT36 114 aa14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 ARVCFO00192 962 aa14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 EEF2KO00418 725 aaKnown RBP14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 PURAQ00577 322 aaKnown RBP14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 LRRC43Q8N309 656 aa14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 C3orf20Q8ND61 904 aa14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 PYROXD1Q8WU10 500 aa14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 MRPS31Q92665 395 aaKnown RBP14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 DPF3Q92784 378 aa14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 PADI3Q9ULW8 664 aa14.34□□□□□ -0.11
CSNK1G3-201ENST00000345990 OR6C75A6NL08 312 aa14.33□□□□□ -0.12
CSNK1G3-201ENST00000345990 SRGAP2O75044 1071 aa14.33□□□□□ -0.12
CSNK1G3-201ENST00000345990 KRT14P02533 472 aa14.33□□□□□ -0.12
CSNK1G3-201ENST00000345990 SLC11A2P49281 568 aa14.33□□□□□ -0.12
CSNK1G3-201ENST00000345990 CTCFP49711 727 aaPredicted RBP14.33□□□□□ -0.12
CSNK1G3-201ENST00000345990 NR1H3Q13133 447 aa14.33□□□□□ -0.12
CSNK1G3-201ENST00000345990 EFHBQ8N7U6 833 aa14.33□□□□□ -0.12
CSNK1G3-201ENST00000345990 FBXO32Q969P5 355 aa14.33□□□□□ -0.12
CSNK1G3-201ENST00000345990 COQ4Q9Y3A0 265 aa14.33□□□□□ -0.12
CSNK1G3-201ENST00000345990 FARP1Q9Y4F1 1045 aaPredicted RBP14.33□□□□□ -0.12
CSNK1G3-201ENST00000345990 DDX3XO00571 662 aaKnown RBP eCLIP14.33□□□□□ -0.122e-6■■■■□ 24
CSNK1G3-201ENST00000345990 GIPC1O14908 333 aa14.33□□□□□ -0.12
CSNK1G3-201ENST00000345990 RRM1P23921 792 aa14.33□□□□□ -0.12
CSNK1G3-201ENST00000345990 SPATA18Q8TC71 538 aa14.33□□□□□ -0.12
CSNK1G3-201ENST00000345990 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.33□□□□□ -0.12
CSNK1G3-201ENST00000345990 WRAP73Q9P2S5 460 aaPredicted RBP14.33□□□□□ -0.12
CSNK1G3-201ENST00000345990 PNMA6AP0CW24 399 aaPredicted RBP14.33□□□□□ -0.12
CSNK1G3-201ENST00000345990 STIP1P31948 543 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms