RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 AP3S1Q92572 193 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 CD109Q6YHK3 1445 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 ERVV-2B6SEH9 535 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 AP3D1O14617 1153 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 SBK2P0C263 348 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 GJB2P29033 226 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 PTPN12Q05209 780 aaKnown RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 SSX2Q16385 188 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 KIAA1755Q5JYT7 1200 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 TBC1D21Q8IYX1 336 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 PDXPQ96GD0 296 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 NT5C3AQ9H0P0 336 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 SALL1Q9NSC2 1324 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 HIRAP54198 1017 aaPredicted RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 FKBP4Q02790 459 aaKnown RBP eCLIP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 TTF1Q15361 905 aaPredicted RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 MAMSTRQ6ZN01 415 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 PDZD4Q76G19 769 aaPredicted RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 PIGWQ7Z7B1 504 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 NKX2-3Q8TAU0 364 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 OSCP1Q8WVF1 389 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 PYDC1Q8WXC3 89 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 C12orf65Q9H3J6 166 aaKnown RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 DAPK2Q9UIK4 370 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 DUSP12Q9UNI6 340 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 SSU72P8A0A1W2PR75 194 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 LRRIQ4A6NIV6 560 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 PER2O15055 1255 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 ATXN8OSP0DMR3 200 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 Q3C1V9 767 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 ZCCHC12Q6PEW1 402 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 RASSF6Q6ZTQ3 369 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 RCOR2Q8IZ40 523 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 POMGNT1Q8WZA1 660 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 CTRCQ99895 268 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 NEUROG2Q9H2A3 272 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 SYTL2Q9HCH5 934 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 DYRK4Q9NR20 520 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 KIF14Q15058 1648 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 RAB19A4D1S5 217 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 CHN2P52757 468 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 ZMYND11Q15326 602 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 PRR5LQ6MZQ0 368 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 LRRC20Q8TCA0 184 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 SETDB2Q96T68 719 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 MAGED1Q9Y5V3 778 aaPredicted RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 EHBP1L1Q8N3D4 1523 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 DEXIO95424 95 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 TGDSO95455 350 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 ITIH1P19827 911 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 HSD17B12Q53GQ0 312 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 SLC35F6Q8N357 371 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 TDRD5Q8NAT2 981 aaKnown RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 TAB2Q9NYJ8 693 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 KCNN3Q9UGI6 736 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 GADD45BO75293 160 aaPredicted RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 IGHMBP2P38935 993 aaKnown RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 ENPEPQ07075 957 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 C1DQ13901 141 aaKnown RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 C1orf141Q5JVX7 400 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 TRAPPC11Q7Z392 1133 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 SIMC1Q8NDZ2 872 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 ECHDC1Q9NTX5 307 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 ASIC3Q9UHC3 531 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 LNPEPQ9UIQ6 1025 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 ZNF263O14978 683 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 CDH16O75309 829 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 AFPP02771 609 aaKnown RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 LDHBP07195 334 aaKnown RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 PLEKHM2Q8IWE5 1019 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 NARS2Q96I59 477 aaKnown RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 OSBPL8Q9BZF1 889 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 PDGFDQ9GZP0 370 aaPredicted RBP3.91□□□□□ -1.78
SYNE2-202ENST00000344113 ZNF609O15014 1411 aa3.91□□□□□ -1.78
SYNE2-202ENST00000344113 PPP6R2O75170 966 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 SPAG6O75602 509 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 MT-ND3P03897 115 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 PHKA2P46019 1235 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 AKR1D1P51857 326 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 PPIL2Q13356 520 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 RNF113BQ8IZP6 322 aaKnown RBP3.9□□□□□ -1.78
SYNE2-202ENST00000344113 QTRT2Q9H974 415 aaKnown RBP3.9□□□□□ -1.78
SYNE2-202ENST00000344113 KBTBD4Q9NVX7 518 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 L7N2F9 121 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 NFIBO00712 420 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 ZBTB11O95625 1053 aaPredicted RBP3.9□□□□□ -1.78
SYNE2-202ENST00000344113 PHKA1P46020 1223 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 ARF5P84085 180 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 MCL1Q07820 350 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 SSH3Q8TE77 659 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 APOL2Q9BQE5 337 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 OLA1Q9NTK5 396 aaKnown RBP3.9□□□□□ -1.78
SYNE2-202ENST00000344113 EPN1Q9Y6I3 576 aaPredicted RBP3.9□□□□□ -1.78
SYNE2-202ENST00000344113 MN1Q10571 1320 aaPredicted RBP3.9□□□□□ -1.78
SYNE2-202ENST00000344113 SOBPA7XYQ1 873 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 GAS7O60861 476 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 CTRB1P17538 263 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 NFKBIAP25963 317 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 GRK3P35626 688 aa3.9□□□□□ -1.78
SYNE2-202ENST00000344113 KNOP1Q1ED39 458 aaKnown RBP3.9□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms