RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 VPS11Q9H270 941 aa15.58■□□□□ 0.08
CLCN1-201ENST00000343257 IVNS1ABPQ9Y6Y0 642 aa15.58■□□□□ 0.08
CLCN1-201ENST00000343257 SPATA31A5Q5VU36 1347 aa15.58■□□□□ 0.08
CLCN1-201ENST00000343257 SPATA31A6Q5VVP1 1343 aa15.58■□□□□ 0.08
CLCN1-201ENST00000343257 SPATA31A7Q8IWB4 1347 aa15.58■□□□□ 0.08
CLCN1-201ENST00000343257 TM7SF2O76062 418 aa15.57■□□□□ 0.08
CLCN1-201ENST00000343257 YWHAGP61981 247 aaKnown RBP eCLIP15.57■□□□□ 0.08
CLCN1-201ENST00000343257 R3HDM1Q15032 1099 aaKnown RBP15.57■□□□□ 0.08
CLCN1-201ENST00000343257 NET1Q7Z628 596 aaPredicted RBP15.57■□□□□ 0.08
CLCN1-201ENST00000343257 NCAPG2Q86XI2 1143 aa15.57■□□□□ 0.08
CLCN1-201ENST00000343257 HAPLN3Q96S86 360 aa15.57■□□□□ 0.08
CLCN1-201ENST00000343257 TUFT1Q9NNX1 390 aa15.57■□□□□ 0.08
CLCN1-201ENST00000343257 PCDHGB4Q9UN71 923 aa15.57■□□□□ 0.08
CLCN1-201ENST00000343257 PCDHGB5Q9Y5G0 923 aa15.57■□□□□ 0.08
CLCN1-201ENST00000343257 IGLV3-22A0A075B6J6 115 aa15.57■□□□□ 0.08
CLCN1-201ENST00000343257 BUD23O43709 281 aaKnown RBP15.57■□□□□ 0.08
CLCN1-201ENST00000343257 SOX10P56693 466 aa15.57■□□□□ 0.08
CLCN1-201ENST00000343257 BASP1P80723 227 aaKnown RBP15.57■□□□□ 0.08
CLCN1-201ENST00000343257 MSLNQ13421 630 aaPredicted RBP15.57■□□□□ 0.08
CLCN1-201ENST00000343257 KRT72Q14CN4 511 aa15.57■□□□□ 0.08
CLCN1-201ENST00000343257 SMAD1Q15797 465 aaKnown RBP15.57■□□□□ 0.08
CLCN1-201ENST00000343257 SMTNL2Q2TAL5 461 aa15.57■□□□□ 0.08
CLCN1-201ENST00000343257 TCHHL1Q5QJ38 904 aaPredicted RBP15.57■□□□□ 0.08
CLCN1-201ENST00000343257 MOXD1Q6UVY6 613 aa15.57■□□□□ 0.08
CLCN1-201ENST00000343257 ALLCQ8N6M5 410 aa15.57■□□□□ 0.08
CLCN1-201ENST00000343257 LENG1Q96BZ8 264 aaPredicted RBP15.57■□□□□ 0.08
CLCN1-201ENST00000343257 WDR83Q9BRX9 315 aaKnown RBP15.57■□□□□ 0.08
CLCN1-201ENST00000343257 SEL1LQ9UBV2 794 aa15.57■□□□□ 0.08
CLCN1-201ENST00000343257 PCDHAC2Q9Y5I4 1007 aa15.57■□□□□ 0.08
CLCN1-201ENST00000343257 ZMPSTE24O75844 475 aa15.57■□□□□ 0.08
CLCN1-201ENST00000343257 RAP1GDS1P52306 607 aa15.57■□□□□ 0.08
CLCN1-201ENST00000343257 SLC18A1P54219 525 aa15.57■□□□□ 0.08
CLCN1-201ENST00000343257 TRMT5Q32P41 509 aaKnown RBP15.57■□□□□ 0.08
CLCN1-201ENST00000343257 PTF1AQ7RTS3 328 aa15.57■□□□□ 0.08
CLCN1-201ENST00000343257 IGDCC3Q8IVU1 814 aa15.57■□□□□ 0.08
CLCN1-201ENST00000343257 DCAKDQ8WVC6 231 aa15.57■□□□□ 0.08
CLCN1-201ENST00000343257 NCSTNQ92542 709 aa15.57■□□□□ 0.08
CLCN1-201ENST00000343257 PLEKHG4BQ96PX9 1271 aa15.57■□□□□ 0.08
CLCN1-201ENST00000343257 MMP19Q99542 508 aa15.57■□□□□ 0.08
CLCN1-201ENST00000343257 C10orf71Q711Q0 1435 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 LOC100653049A0A140TA62 436 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 F8VP50 259 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 GNPATO15228 680 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 PSMD10O75832 226 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 KRT34O76011 436 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 TOP3BO95985 862 aaKnown RBP15.56■□□□□ 0.08
CLCN1-201ENST00000343257 UNGP13051 313 aaPredicted RBP15.56■□□□□ 0.08
CLCN1-201ENST00000343257 VCLP18206 1134 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 PHBP35232 272 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 HSPA2P54652 639 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 BST1Q10588 318 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 BMPR2Q13873 1038 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 PDK3Q15120 406 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 CHI3L2Q15782 390 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 SLC9A9Q8IVB4 645 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 ATP11CQ8NB49 1132 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 FBXL13Q8NEE6 735 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 PIP4K2CQ8TBX8 421 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 MKL1Q969V6 931 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 IWS1Q96ST2 819 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 GRIP2Q9C0E4 1043 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 I3L4J1 428 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 SLC26A4O43511 780 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 DNAJC6O75061 913 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 AVILO75366 819 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 HNRNPCP07910 306 aaKnown RBP eCLIP15.56■□□□□ 0.08
CLCN1-201ENST00000343257 MORF4L2Q15014 288 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 DBN1Q16643 649 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 KBTBD12Q3ZCT8 623 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 SPDYAQ5MJ70 313 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 CES4AQ5XG92 561 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 ADGRD1Q6QNK2 874 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 DENND5BQ6ZUT9 1274 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 SV2AQ7L0J3 742 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 AMIGO3Q86WK7 504 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 PDSS2Q86YH6 399 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.56■□□□□ 0.08
CLCN1-201ENST00000343257 CFAP36Q96G28 342 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 TAGLN3Q9UI15 199 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 APPL1Q9UKG1 709 aa15.56■□□□□ 0.08
CLCN1-201ENST00000343257 MYPNQ86TC9 1320 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 TM9SF1O15321 606 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 MAGEC1O60732 1142 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 INHBAP08476 426 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 KCNT1Q5JUK3 1230 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 RABGAP1LQ5R372 815 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 FAM102BQ5T8I3 360 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 IYDQ6PHW0 289 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 RSPH3Q86UC2 560 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 APOL6Q9BWW8 343 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 S100A14Q9HCY8 104 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 TMCO1Q9UM00 188 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 HEMK1Q9Y5R4 338 aaPredicted RBP15.55■□□□□ 0.08
CLCN1-201ENST00000343257 CAPN8A6NHC0 703 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 COPEO14579 308 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 ATXN3P54252 364 aaPredicted RBP15.55■□□□□ 0.08
CLCN1-201ENST00000343257 MAMLD1Q13495 774 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 GRAPQ13588 217 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 ACAP1Q15027 740 aa15.55■□□□□ 0.08
CLCN1-201ENST00000343257 FBXL19Q6PCT2 694 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms