RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 MYL12BO14950 172 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 DHX15O43143 795 aaKnown RBP6.39□□□□□ -1.39
VCAN-203ENST00000343200 PRPF4O43172 522 aaKnown RBP eCLIP6.39□□□□□ -1.39
VCAN-203ENST00000343200 SNX4O95219 450 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 ATP6V1C1P21283 382 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 FAM26FQ5R3K3 315 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 BROXQ5VW32 411 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 ARMC6Q6NXE6 501 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 CLVS1Q8IUQ0 354 aaPredicted RBP6.39□□□□□ -1.39
VCAN-203ENST00000343200 EFCAB1Q9HAE3 211 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 CASS4Q9NQ75 786 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 ABCB10Q9NRK6 738 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 KCNJ14Q9UNX9 436 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 CDK13Q14004 1512 aaKnown RBP6.39□□□□□ -1.39
VCAN-203ENST00000343200 PCDH11XQ9BZA7 1347 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 HAT1O14929 419 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 PSMB9P28065 219 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 SLC1A1P43005 524 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 IREB2P48200 963 aaKnown RBP6.39□□□□□ -1.39
VCAN-203ENST00000343200 ZNF200P98182 395 aaPredicted RBP6.39□□□□□ -1.39
VCAN-203ENST00000343200 PTK7Q13308 1070 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 POLD3Q15054 466 aaPredicted RBP6.39□□□□□ -1.39
VCAN-203ENST00000343200 PKN3Q6P5Z2 889 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 SNIP1Q8TAD8 396 aaKnown RBP6.39□□□□□ -1.39
VCAN-203ENST00000343200 JDP2Q8WYK2 163 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 PFDN5Q99471 154 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 GPCPD1Q9NPB8 672 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 PNPLA3Q9NST1 481 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 XPO7Q9UIA9 1087 aaKnown RBP6.39□□□□□ -1.39
VCAN-203ENST00000343200 ZHX2Q9Y6X8 837 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 SLC26A3P40879 764 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 PSMD4P55036 377 aaKnown RBP6.39□□□□□ -1.39
VCAN-203ENST00000343200 CSNK2BP67870 215 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 ZRANB3Q5FWF4 1079 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 THEMIS2Q5TEJ8 643 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 ESRP1Q6NXG1 681 aaKnown RBP6.39□□□□□ -1.39
VCAN-203ENST00000343200 RASAL3Q86YV0 1011 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 ZSCAN10Q96SZ4 725 aaPredicted RBP6.39□□□□□ -1.39
VCAN-203ENST00000343200 EGFL8Q99944 293 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 TUBB1Q9H4B7 451 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 TMEM206Q9H813 350 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 SLC25A13Q9UJS0 675 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 SNX24Q9Y343 169 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 TNKSO95271 1327 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 MAP3K19Q56UN5 1328 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 KPNA6O60684 536 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 PTCD1O75127 700 aaKnown RBP6.39□□□□□ -1.39
VCAN-203ENST00000343200 ANXA6P08133 673 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 ARPP19P56211 112 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 RASA2Q15283 850 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 EDRF1Q3B7T1 1238 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 SYTL3Q4VX76 610 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 TIGD7Q6NT04 549 aaPredicted RBP6.39□□□□□ -1.39
VCAN-203ENST00000343200 BHLHB9Q6PI77 547 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 KSR2Q6VAB6 950 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 CCDC28AQ8IWP9 274 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 C16orf71Q8IYS4 520 aaPredicted RBP6.39□□□□□ -1.39
VCAN-203ENST00000343200 RDH13Q8NBN7 331 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 MAFIPQ8WZ33 124 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 TTC7AQ9ULT0 858 aaPredicted RBP6.39□□□□□ -1.39
VCAN-203ENST00000343200 LOC110117498-PIK3R3F6TDL0 507 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 NEMP1O14524 444 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 CCNKO75909 580 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 CYP2D6P10635 497 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 PCNAP12004 261 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 ATP6V1B2P21281 511 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 OSBPP22059 807 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 RPL5P46777 297 aaKnown RBP6.39□□□□□ -1.39
VCAN-203ENST00000343200 TFCP2Q12800 502 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 TRIM72Q6ZMU5 477 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 RASGRP2Q7LDG7 609 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 ZNF713Q8N859 430 aaPredicted RBP6.39□□□□□ -1.39
VCAN-203ENST00000343200 EEF2KMTQ96G04 330 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 KCTD14Q9BQ13 255 aaPredicted RBP6.39□□□□□ -1.39
VCAN-203ENST00000343200 APOL6Q9BWW8 343 aa6.39□□□□□ -1.39
VCAN-203ENST00000343200 GNPATO15228 680 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 MBD4O95243 580 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 SERPINB5P36952 375 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 NRG3P56975 720 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 ITGA7Q13683 1181 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 FAM98BQ52LJ0 330 aaKnown RBP6.38□□□□□ -1.39
VCAN-203ENST00000343200 PYDC2Q56P42 97 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 APPBP2Q92624 585 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 RNPEPL1Q9HAU8 725 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 IL1RL2Q9HB29 575 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 ZSWIM6Q9HCJ5 1215 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 COMMD8Q9NX08 183 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 SLC8A2Q9UPR5 921 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 PA2G4Q9UQ80 394 aaKnown RBP6.38□□□□□ -1.39
VCAN-203ENST00000343200 INPP5FQ9Y2H2 1132 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 CCNHP51946 323 aaPredicted RBP6.38□□□□□ -1.39
VCAN-203ENST00000343200 ENPEPQ07075 957 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 LONRF1Q17RB8 773 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 SEL1L3Q68CR1 1132 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 TTC37Q6PGP7 1564 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 HES6Q96HZ4 224 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 ART5Q96L15 291 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 PSTPIP2Q9H939 334 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 GIN1Q9NXP7 522 aa6.38□□□□□ -1.39
VCAN-203ENST00000343200 PCSK1NQ9UHG2 260 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms