RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 TRMT2BQ96GJ1 504 aaKnown RBP13.93□□□□□ -0.18
HLA-DQA1-201ENST00000343139 C8orf48Q96LL4 319 aa13.93□□□□□ -0.18
HLA-DQA1-201ENST00000343139 MYADMQ96S97 322 aa13.93□□□□□ -0.18
HLA-DQA1-201ENST00000343139 GPR88Q9GZN0 384 aa13.93□□□□□ -0.18
HLA-DQA1-201ENST00000343139 TMEM63CQ9P1W3 806 aa13.93□□□□□ -0.18
HLA-DQA1-201ENST00000343139 ZMYM5Q9UJ78 669 aa13.93□□□□□ -0.18
HLA-DQA1-201ENST00000343139 GTPBP10A4D1E9 387 aaKnown RBP13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 ANHXE9PGG2 379 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 TRIM66O15016 1216 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 DCXO43602 365 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 LETM1O95202 739 aaPredicted RBP13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 CYP2F1P24903 491 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 RAP1GAPP47736 663 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 NDST1P52848 882 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 PTPN21Q16825 1174 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 SLC5A9Q2M3M2 681 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 MDH1BQ5I0G3 518 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 GET4Q7L5D6 327 aaPredicted RBP13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 NPAS3Q8IXF0 933 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 LMO3Q8TAP4 145 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 ITFG1Q8TB96 612 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 MYRFLQ96LU7 910 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 NT5C1AQ9BXI3 368 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 DPEP3Q9H4B8 488 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 EHD2Q9NZN4 543 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 UXTQ9UBK9 157 aaPredicted RBP13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 ATP8B3O60423 1300 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 TCF20Q9UGU0 1960 aaKnown RBP13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 LRRN2O75325 713 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 NOL4O94818 638 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 HMGA1P17096 107 aaKnown RBP13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 EEF1GP26641 437 aaKnown RBP13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 WEE1P30291 646 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 CDC25CP30307 473 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 CCR2P41597 374 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 YWHAEP62258 255 aaKnown RBP13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 CYP27A1Q02318 531 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 GCNT1Q02742 428 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 CUL2Q13617 745 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 MTSS1LQ765P7 747 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 UBALD2Q8IYN6 164 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 EHBP1Q8NDI1 1231 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 WHAMMQ8TF30 809 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 JAKMIP2Q96AA8 810 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 CISHQ9NSE2 258 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 LIMD1Q9UGP4 676 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 SORCS3Q9UPU3 1222 aa13.92□□□□□ -0.18
HLA-DQA1-201ENST00000343139 MOSPD3O75425 235 aa13.91□□□□□ -0.18
HLA-DQA1-201ENST00000343139 SOAT2O75908 522 aa13.91□□□□□ -0.18
HLA-DQA1-201ENST00000343139 BDNFP23560 247 aa13.91□□□□□ -0.18
HLA-DQA1-201ENST00000343139 TAF12Q16514 161 aa13.91□□□□□ -0.18
HLA-DQA1-201ENST00000343139 MAN2A1Q16706 1144 aa13.91□□□□□ -0.18
HLA-DQA1-201ENST00000343139 CCDC142Q17RM4 750 aa13.91□□□□□ -0.18
HLA-DQA1-201ENST00000343139 HS6ST3Q8IZP7 471 aa13.91□□□□□ -0.18
HLA-DQA1-201ENST00000343139 FAM200AQ8TCP9 573 aa13.91□□□□□ -0.18
HLA-DQA1-201ENST00000343139 TATDN2Q93075 761 aa13.91□□□□□ -0.18
HLA-DQA1-201ENST00000343139 ELMO3Q96BJ8 720 aa13.91□□□□□ -0.18
HLA-DQA1-201ENST00000343139 FAM81BQ96LP2 452 aa13.91□□□□□ -0.18
HLA-DQA1-201ENST00000343139 NT5C1BQ96P26 610 aa13.91□□□□□ -0.18
HLA-DQA1-201ENST00000343139 LPIN3Q9BQK8 851 aa13.91□□□□□ -0.18
HLA-DQA1-201ENST00000343139 B3GNT5Q9BYG0 378 aa13.91□□□□□ -0.18
HLA-DQA1-201ENST00000343139 KCNK12Q9HB15 430 aa13.91□□□□□ -0.18
HLA-DQA1-201ENST00000343139 TRPV4Q9HBA0 871 aa13.91□□□□□ -0.18
HLA-DQA1-201ENST00000343139 C2orf16Q68DN1 1984 aa13.9□□□□□ -0.18
HLA-DQA1-201ENST00000343139 SP100P23497 879 aaPredicted RBP13.9□□□□□ -0.18
HLA-DQA1-201ENST00000343139 ANXA13P27216 316 aa13.9□□□□□ -0.18
HLA-DQA1-201ENST00000343139 MTMR3Q13615 1198 aa13.9□□□□□ -0.18
HLA-DQA1-201ENST00000343139 HTR4Q13639 388 aa13.9□□□□□ -0.18
HLA-DQA1-201ENST00000343139 DDR2Q16832 855 aa13.9□□□□□ -0.18
HLA-DQA1-201ENST00000343139 SKOR2Q2VWA4 1001 aaPredicted RBP13.9□□□□□ -0.18
HLA-DQA1-201ENST00000343139 PAQR9Q6ZVX9 377 aa13.9□□□□□ -0.18
HLA-DQA1-201ENST00000343139 GAREM2Q75VX8 874 aa13.9□□□□□ -0.18
HLA-DQA1-201ENST00000343139 ACOT1Q86TX2 421 aa13.9□□□□□ -0.18
HLA-DQA1-201ENST00000343139 FUKQ8N0W3 1084 aa13.9□□□□□ -0.18
HLA-DQA1-201ENST00000343139 UBR7Q8N806 425 aa13.9□□□□□ -0.18
HLA-DQA1-201ENST00000343139 SHKBP1Q8TBC3 707 aa13.9□□□□□ -0.18
HLA-DQA1-201ENST00000343139 EDAQ92838 391 aa13.9□□□□□ -0.18
HLA-DQA1-201ENST00000343139 SMARCD1Q96GM5 515 aa13.9□□□□□ -0.18
HLA-DQA1-201ENST00000343139 HNRNPABQ99729 332 aaKnown RBP13.9□□□□□ -0.18
HLA-DQA1-201ENST00000343139 TTLL2Q9BWV7 592 aa13.9□□□□□ -0.18
HLA-DQA1-201ENST00000343139 IL21Q9HBE4 155 aa13.9□□□□□ -0.18
HLA-DQA1-201ENST00000343139 CSNK1G1Q9HCP0 422 aa13.9□□□□□ -0.18
HLA-DQA1-201ENST00000343139 HMGXB4Q9UGU5 601 aa13.9□□□□□ -0.18
HLA-DQA1-201ENST00000343139 MUTYHQ9UIF7 546 aa13.9□□□□□ -0.18
HLA-DQA1-201ENST00000343139 NFE2L3Q9Y4A8 694 aa13.9□□□□□ -0.18
HLA-DQA1-201ENST00000343139 MYL4P12829 197 aa13.89□□□□□ -0.19
HLA-DQA1-201ENST00000343139 CEBPBP17676 345 aa13.89□□□□□ -0.19
HLA-DQA1-201ENST00000343139 DDX6P26196 483 aaKnown RBP eCLIP13.89□□□□□ -0.19
HLA-DQA1-201ENST00000343139 GRIK1P39086 918 aa13.89□□□□□ -0.19
HLA-DQA1-201ENST00000343139 MTIF2P46199 727 aaKnown RBP13.89□□□□□ -0.19
HLA-DQA1-201ENST00000343139 PPP3CCP48454 512 aa13.89□□□□□ -0.19
HLA-DQA1-201ENST00000343139 TYRO3Q06418 890 aa13.89□□□□□ -0.19
HLA-DQA1-201ENST00000343139 TDGQ13569 410 aa13.89□□□□□ -0.19
HLA-DQA1-201ENST00000343139 CDKAL1Q5VV42 579 aa13.89□□□□□ -0.19
HLA-DQA1-201ENST00000343139 CAVIN1Q6NZI2 390 aaKnown RBP13.89□□□□□ -0.19
HLA-DQA1-201ENST00000343139 ENOSF1Q7L5Y1 443 aa13.89□□□□□ -0.19
HLA-DQA1-201ENST00000343139 FAM35AQ86V20 835 aa13.89□□□□□ -0.19
HLA-DQA1-201ENST00000343139 GIPC2Q8TF65 315 aa13.89□□□□□ -0.19
HLA-DQA1-201ENST00000343139 KHSRPQ92945 711 aaKnown RBP eCLIP13.89□□□□□ -0.19
HLA-DQA1-201ENST00000343139 E2F7Q96AV8 911 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms