RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 RSPH10BP0C881 870 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 GSTT2P0CG29 244 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 GSTT2BP0CG30 244 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 PHKA2P46019 1235 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 NEK2P51955 445 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 ZNF200P98182 395 aaPredicted RBP19.36■□□□□ 0.69
SMPD1-201ENST00000342245 BTKQ06187 659 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 C3orf67Q6ZVT6 689 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 MZB1Q8WU39 189 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 SGF29Q96ES7 293 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 DCUN1D1Q96GG9 259 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 APOPT1Q96IL0 206 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 REEP2Q9BRK0 252 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 ZNF287Q9HBT7 754 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 SHOC2Q9UQ13 582 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 UBE4BO95155 1302 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 PDGFRBP09619 1106 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 SRGAP2CP0DJJ0 459 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 SRGAP2BP0DMP2 458 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 COL6A2P12110 1019 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 ATP6V1B1P15313 513 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 RAG1P15918 1043 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 ETV4P43268 484 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 HIRAP54198 1017 aaPredicted RBP19.36■□□□□ 0.69
SMPD1-201ENST00000342245 CAVIN4Q5BKX8 364 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 PGM2L1Q6PCE3 622 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 SLC2A7Q6PXP3 512 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 TTC13Q8NBP0 860 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 RIN3Q8TB24 985 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 KLC2Q9H0B6 622 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 TMOD2Q9NZR1 351 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 RABGEF1Q9UJ41 708 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 INPP5FQ9Y2H2 1132 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 COQ6Q9Y2Z9 468 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 MYH11P35749 1972 aa19.36■□□□□ 0.69
SMPD1-201ENST00000342245 TBCAO75347 108 aaKnown RBP19.35■□□□□ 0.69
SMPD1-201ENST00000342245 MT-ND3P03897 115 aa19.35■□□□□ 0.69
SMPD1-201ENST00000342245 EIF2S1P05198 315 aaKnown RBP19.35■□□□□ 0.69
SMPD1-201ENST00000342245 TSHRP16473 764 aa19.35■□□□□ 0.69
SMPD1-201ENST00000342245 TNNI2P48788 182 aa19.35■□□□□ 0.69
SMPD1-201ENST00000342245 NOP14P78316 857 aaKnown RBP19.35■□□□□ 0.69
SMPD1-201ENST00000342245 CHRNDQ07001 517 aa19.35■□□□□ 0.69
SMPD1-201ENST00000342245 CBWD6Q4V339 395 aa19.35■□□□□ 0.69
SMPD1-201ENST00000342245 CBWD3Q5JTY5 395 aa19.35■□□□□ 0.69
SMPD1-201ENST00000342245 CBWD5Q5RIA9 395 aa19.35■□□□□ 0.69
SMPD1-201ENST00000342245 ZNF362Q5T0B9 420 aaPredicted RBP19.35■□□□□ 0.69
SMPD1-201ENST00000342245 RARS2Q5T160 578 aaKnown RBP19.35■□□□□ 0.69
SMPD1-201ENST00000342245 TRIM50Q86XT4 487 aa19.35■□□□□ 0.69
SMPD1-201ENST00000342245 RIOX1Q9H6W3 641 aa19.35■□□□□ 0.69
SMPD1-201ENST00000342245 IQANK1A0A1B0GTG1 560 aa19.35■□□□□ 0.69
SMPD1-201ENST00000342245 FUOMA2VDF0 154 aa19.35■□□□□ 0.69
SMPD1-201ENST00000342245 USP17L3A6NCW0 530 aa19.35■□□□□ 0.69
SMPD1-201ENST00000342245 USP17L4A6NCW7 530 aa19.35■□□□□ 0.69
SMPD1-201ENST00000342245 DCAF8L1A6NGE4 600 aa19.35■□□□□ 0.69
SMPD1-201ENST00000342245 H3BSA7 217 aa19.35■□□□□ 0.69
SMPD1-201ENST00000342245 LSM1O15116 133 aaKnown RBP19.35■□□□□ 0.69
SMPD1-201ENST00000342245 TGFB1I1O43294 461 aa19.35■□□□□ 0.69
SMPD1-201ENST00000342245 ATMINO43313 823 aaPredicted RBP19.35■□□□□ 0.69
SMPD1-201ENST00000342245 ZNF23P17027 643 aa19.35■□□□□ 0.69
SMPD1-201ENST00000342245 BGNP21810 368 aa19.35■□□□□ 0.69
SMPD1-201ENST00000342245 ACAT1P24752 427 aaKnown RBP19.35■□□□□ 0.69
SMPD1-201ENST00000342245 NEPROQ6NW34 567 aa19.35■□□□□ 0.69
SMPD1-201ENST00000342245 USP17L1Q7RTZ2 530 aa19.35■□□□□ 0.69
SMPD1-201ENST00000342245 ZNF384Q8TF68 577 aa19.35■□□□□ 0.69
SMPD1-201ENST00000342245 BORCS5Q969J3 196 aa19.35■□□□□ 0.69
SMPD1-201ENST00000342245 BTBD6Q96KE9 485 aa19.35■□□□□ 0.69
SMPD1-201ENST00000342245 SPATA31A5Q5VU36 1347 aa19.35■□□□□ 0.69
SMPD1-201ENST00000342245 SPATA31A6Q5VVP1 1343 aa19.35■□□□□ 0.69
SMPD1-201ENST00000342245 SPATA31A7Q8IWB4 1347 aa19.35■□□□□ 0.69
SMPD1-201ENST00000342245 ERVV-1B6SEH8 477 aa19.34■□□□□ 0.69
SMPD1-201ENST00000342245 GOLGA8TH3BQL2 631 aa19.34■□□□□ 0.69
SMPD1-201ENST00000342245 BAIAP3O94812 1187 aa19.34■□□□□ 0.69
SMPD1-201ENST00000342245 KLHL2O95198 593 aa19.34■□□□□ 0.69
SMPD1-201ENST00000342245 CCR3P51677 355 aa19.34■□□□□ 0.69
SMPD1-201ENST00000342245 MYBPC1Q00872 1141 aa19.34■□□□□ 0.69
SMPD1-201ENST00000342245 RABGAP1LQ5R372 815 aa19.34■□□□□ 0.69
SMPD1-201ENST00000342245 SLFN12Q8IYM2 578 aa19.34■□□□□ 0.69
SMPD1-201ENST00000342245 KCTD17Q8N5Z5 321 aa19.34■□□□□ 0.69
SMPD1-201ENST00000342245 RAB3IL1Q8TBN0 382 aa19.34■□□□□ 0.69
SMPD1-201ENST00000342245 ACTRT2Q8TDY3 377 aa19.34■□□□□ 0.69
SMPD1-201ENST00000342245 PRPF18Q99633 342 aaKnown RBP19.34■□□□□ 0.69
SMPD1-201ENST00000342245 ACSS3Q9H6R3 686 aa19.34■□□□□ 0.69
SMPD1-201ENST00000342245 UBE2TQ9NPD8 197 aaPredicted RBP19.34■□□□□ 0.69
SMPD1-201ENST00000342245 CNTN3Q9P232 1028 aa19.34■□□□□ 0.69
SMPD1-201ENST00000342245 PSMD13Q9UNM6 376 aa19.34■□□□□ 0.69
SMPD1-201ENST00000342245 GPC6Q9Y625 555 aaPredicted RBP19.34■□□□□ 0.69
SMPD1-201ENST00000342245 MAPK4P31152 587 aa19.34■□□□□ 0.69
SMPD1-201ENST00000342245 C16orf72Q14CZ0 275 aa19.34■□□□□ 0.69
SMPD1-201ENST00000342245 TGFBIQ15582 683 aa19.34■□□□□ 0.69
SMPD1-201ENST00000342245 DRICH1Q6PGQ1 229 aaPredicted RBP19.34■□□□□ 0.69
SMPD1-201ENST00000342245 CCDC33Q8N5R6 958 aa19.34■□□□□ 0.69
SMPD1-201ENST00000342245 GJA10Q969M2 543 aa19.34■□□□□ 0.69
SMPD1-201ENST00000342245 PCDHB18PQ96TA0 734 aa19.34■□□□□ 0.69
SMPD1-201ENST00000342245 PAFAH2Q99487 392 aa19.34■□□□□ 0.69
SMPD1-201ENST00000342245 ARPC5LQ9BPX5 153 aa19.34■□□□□ 0.69
SMPD1-201ENST00000342245 SELENONQ9NZV5 590 aa19.34■□□□□ 0.69
SMPD1-201ENST00000342245 IGSF9Q9P2J2 1179 aa19.34■□□□□ 0.69
SMPD1-201ENST00000342245 MTMR7Q9Y216 660 aa19.34■□□□□ 0.69
SMPD1-201ENST00000342245 CAPN8A6NHC0 703 aa19.33■□□□□ 0.69
SMPD1-201ENST00000342245 ADCY6O43306 1168 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms