RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 TSPAN1O60635 241 aa15.85■□□□□ 0.13
TPM3-208ENST00000341485 ACSL3O95573 720 aa15.85■□□□□ 0.13
TPM3-208ENST00000341485 HMGCRP04035 888 aa15.85■□□□□ 0.13
TPM3-208ENST00000341485 TMEM191BP0C7N4 346 aa15.85■□□□□ 0.13
TPM3-208ENST00000341485 MCF2P10911 925 aa15.85■□□□□ 0.13
TPM3-208ENST00000341485 ARF4P18085 180 aaPredicted RBP15.85■□□□□ 0.13
TPM3-208ENST00000341485 DRD4P21917 467 aa15.85■□□□□ 0.13
TPM3-208ENST00000341485 VPS41P49754 854 aa15.85■□□□□ 0.13
TPM3-208ENST00000341485 ADAM17P78536 824 aa15.85■□□□□ 0.13
TPM3-208ENST00000341485 DUOXA2Q1HG44 320 aa15.85■□□□□ 0.13
TPM3-208ENST00000341485 ZNF394Q53GI3 561 aa15.85■□□□□ 0.13
TPM3-208ENST00000341485 MFSD5Q6N075 450 aa15.85■□□□□ 0.13
TPM3-208ENST00000341485 CXCL17Q6UXB2 119 aa15.85■□□□□ 0.13
TPM3-208ENST00000341485 YTHDF3Q7Z739 585 aaKnown RBP15.85■□□□□ 0.13
TPM3-208ENST00000341485 PACS2Q86VP3 889 aa15.85■□□□□ 0.13
TPM3-208ENST00000341485 ATXN2LQ8WWM7 1075 aaKnown RBP15.85■□□□□ 0.13
TPM3-208ENST00000341485 ADPGKQ9BRR6 497 aa15.85■□□□□ 0.13
TPM3-208ENST00000341485 ROPN1BQ9BZX4 212 aaPredicted RBP15.85■□□□□ 0.13
TPM3-208ENST00000341485 ADAMTS10Q9H324 1103 aa15.85■□□□□ 0.13
TPM3-208ENST00000341485 PDZD7Q9H5P4 517 aa15.85■□□□□ 0.13
TPM3-208ENST00000341485 RPF1Q9H9Y2 349 aaKnown RBP15.85■□□□□ 0.13
TPM3-208ENST00000341485 ROPN1Q9HAT0 212 aaPredicted RBP15.85■□□□□ 0.13
TPM3-208ENST00000341485 DNAJC17Q9NVM6 304 aaKnown RBP15.85■□□□□ 0.13
TPM3-208ENST00000341485 ANK1P16157 1881 aa15.85■□□□□ 0.13
TPM3-208ENST00000341485 GPR32O75388 356 aa15.85■□□□□ 0.13
TPM3-208ENST00000341485 LSM8O95777 96 aaKnown RBP15.85■□□□□ 0.13
TPM3-208ENST00000341485 CALB1P05937 261 aa15.85■□□□□ 0.13
TPM3-208ENST00000341485 ADCY8P40145 1251 aa15.85■□□□□ 0.13
TPM3-208ENST00000341485 SGSM1Q2NKQ1 1148 aa15.85■□□□□ 0.13
TPM3-208ENST00000341485 OTUD6BQ8N6M0 293 aa15.85■□□□□ 0.13
TPM3-208ENST00000341485 CEP120Q8N960 986 aa15.85■□□□□ 0.13
TPM3-208ENST00000341485 OSMRQ99650 979 aa15.85■□□□□ 0.13
TPM3-208ENST00000341485 TRAIPQ9BWF2 469 aa15.85■□□□□ 0.13
TPM3-208ENST00000341485 ANAPC5Q9UJX4 755 aa15.85■□□□□ 0.13
TPM3-208ENST00000341485 PI4K2BG5E9Z4 385 aa15.84■□□□□ 0.13
TPM3-208ENST00000341485 GNRH1P01148 92 aa15.84■□□□□ 0.13
TPM3-208ENST00000341485 TFAMQ00059 246 aaKnown RBP15.84■□□□□ 0.13
TPM3-208ENST00000341485 OGDHQ02218 1023 aa15.84■□□□□ 0.13
TPM3-208ENST00000341485 CAV1Q03135 178 aa15.84■□□□□ 0.13
TPM3-208ENST00000341485 NFX1Q12986 1120 aaKnown RBP15.84■□□□□ 0.13
TPM3-208ENST00000341485 IFT88Q13099 833 aa15.84■□□□□ 0.13
TPM3-208ENST00000341485 LONRF1Q17RB8 773 aa15.84■□□□□ 0.13
TPM3-208ENST00000341485 SCARA5Q6ZMJ2 495 aa15.84■□□□□ 0.13
TPM3-208ENST00000341485 CATSPER4Q7RTX7 472 aa15.84■□□□□ 0.13
TPM3-208ENST00000341485 WDTC1Q8N5D0 677 aa15.84■□□□□ 0.13
TPM3-208ENST00000341485 TFAP2BQ92481 460 aa15.84■□□□□ 0.13
TPM3-208ENST00000341485 SEC16BQ96JE7 1060 aa15.84■□□□□ 0.13
TPM3-208ENST00000341485 PWWP2AQ96N64 755 aa15.84■□□□□ 0.13
TPM3-208ENST00000341485 ADAMTS4O75173 837 aa15.83■□□□□ 0.13
TPM3-208ENST00000341485 TTC4O95801 387 aa15.83■□□□□ 0.13
TPM3-208ENST00000341485 WEE2P0C1S8 567 aa15.83■□□□□ 0.13
TPM3-208ENST00000341485 ASPAP45381 313 aa15.83■□□□□ 0.13
TPM3-208ENST00000341485 TRPC3Q13507 836 aa15.83■□□□□ 0.13
TPM3-208ENST00000341485 ARHGEF6Q15052 776 aa15.83■□□□□ 0.13
TPM3-208ENST00000341485 ZNF699Q32M78 642 aa15.83■□□□□ 0.13
TPM3-208ENST00000341485 TTC31Q49AM3 519 aaPredicted RBP15.83■□□□□ 0.13
TPM3-208ENST00000341485 FAM47CQ5HY64 1035 aa15.83■□□□□ 0.13
TPM3-208ENST00000341485 DNAJC24Q6P3W2 148 aa15.83■□□□□ 0.13
TPM3-208ENST00000341485 PRUNE1Q86TP1 453 aa15.83■□□□□ 0.13
TPM3-208ENST00000341485 CHMP6Q96FZ7 201 aa15.83■□□□□ 0.13
TPM3-208ENST00000341485 MCEEQ96PE7 176 aa15.83■□□□□ 0.13
TPM3-208ENST00000341485 SLITRK1Q96PX8 696 aa15.83■□□□□ 0.13
TPM3-208ENST00000341485 STMN4Q9H169 189 aaPredicted RBP15.83■□□□□ 0.13
TPM3-208ENST00000341485 XYLT2Q9H1B5 865 aa15.83■□□□□ 0.13
TPM3-208ENST00000341485 FKTNO75072 461 aa15.83■□□□□ 0.12
TPM3-208ENST00000341485 IL18RAPO95256 599 aa15.83■□□□□ 0.12
TPM3-208ENST00000341485 KRT1P04264 644 aa15.83■□□□□ 0.12
TPM3-208ENST00000341485 STAG3L1P0CL83 205 aa15.83■□□□□ 0.12
TPM3-208ENST00000341485 KRT10P13645 584 aa15.83■□□□□ 0.12
TPM3-208ENST00000341485 KLRC2P26717 231 aa15.83■□□□□ 0.12
TPM3-208ENST00000341485 KYAT1Q16773 422 aa15.83■□□□□ 0.12
TPM3-208ENST00000341485 NBPF20Q3BBV1 942 aa15.83■□□□□ 0.12
TPM3-208ENST00000341485 CCDC38Q502W7 563 aa15.83■□□□□ 0.12
TPM3-208ENST00000341485 PPP1R15BQ5SWA1 713 aa15.83■□□□□ 0.12
TPM3-208ENST00000341485 ZNF365Q70YC5 407 aa15.83■□□□□ 0.12
TPM3-208ENST00000341485 APBB1IPQ7Z5R6 666 aaPredicted RBP15.83■□□□□ 0.12
TPM3-208ENST00000341485 RCOR2Q8IZ40 523 aa15.83■□□□□ 0.12
TPM3-208ENST00000341485 NME8Q8N427 588 aa15.83■□□□□ 0.12
TPM3-208ENST00000341485 TMEM35BQ8NCS4 154 aa15.83■□□□□ 0.12
TPM3-208ENST00000341485 RBM41Q96IZ5 413 aaKnown RBP15.83■□□□□ 0.12
TPM3-208ENST00000341485 ZNF317Q96PQ6 595 aaPredicted RBP15.83■□□□□ 0.12
TPM3-208ENST00000341485 CDHR5Q9HBB8 845 aa15.83■□□□□ 0.12
TPM3-208ENST00000341485 NINJ2Q9NZG7 142 aa15.83■□□□□ 0.12
TPM3-208ENST00000341485 F8VP50 259 aa15.82■□□□□ 0.12
TPM3-208ENST00000341485 ASGR1P07306 291 aa15.82■□□□□ 0.12
TPM3-208ENST00000341485 CXCL8P10145 99 aa15.82■□□□□ 0.12
TPM3-208ENST00000341485 DARSP14868 501 aaKnown RBP15.82■□□□□ 0.12
TPM3-208ENST00000341485 CDH5P33151 784 aaPredicted RBP15.82■□□□□ 0.12
TPM3-208ENST00000341485 NKX3-2P78367 333 aa15.82■□□□□ 0.12
TPM3-208ENST00000341485 KYNUQ16719 465 aa15.82■□□□□ 0.12
TPM3-208ENST00000341485 RNF187Q5TA31 235 aaPredicted RBP15.82■□□□□ 0.12
TPM3-208ENST00000341485 IZUMO3Q5VZ72 239 aa15.82■□□□□ 0.12
TPM3-208ENST00000341485 KAZNQ674X7 775 aa15.82■□□□□ 0.12
TPM3-208ENST00000341485 TAF2Q6P1X5 1199 aa15.82■□□□□ 0.12
TPM3-208ENST00000341485 MFSD7Q6UXD7 560 aa15.82■□□□□ 0.12
TPM3-208ENST00000341485 EXOC3L1Q86VI1 746 aa15.82■□□□□ 0.12
TPM3-208ENST00000341485 IPO4Q8TEX9 1081 aaKnown RBP15.82■□□□□ 0.12
TPM3-208ENST00000341485 ANKRD36BP1Q96IX9 119 aa15.82■□□□□ 0.12
TPM3-208ENST00000341485 GTF2IRD1Q9UHL9 959 aa15.82■□□□□ 0.12
TPM3-208ENST00000341485 PCDHGC3Q9UN70 934 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms