RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 GDPD2Q9HCC8 539 aa21.57■■□□□ 1.04
SYNE2-201ENST00000341472 SPATA6Q9NWH7 488 aaPredicted RBP21.57■■□□□ 1.04
SYNE2-201ENST00000341472 SLC38A8A6NNN8 435 aa21.56■■□□□ 1.04
SYNE2-201ENST00000341472 TACC1O75410 805 aa21.56■■□□□ 1.04
SYNE2-201ENST00000341472 ZNF202O95125 648 aa21.56■■□□□ 1.04
SYNE2-201ENST00000341472 NR3C1P04150 777 aa21.56■■□□□ 1.04
SYNE2-201ENST00000341472 DDX6P26196 483 aaKnown RBP eCLIP21.56■■□□□ 1.04
SYNE2-201ENST00000341472 MAGEA11P43364 429 aa21.56■■□□□ 1.04
SYNE2-201ENST00000341472 MLLT6P55198 1093 aaPredicted RBP21.56■■□□□ 1.04
SYNE2-201ENST00000341472 BIRC3Q13489 604 aa21.56■■□□□ 1.04
SYNE2-201ENST00000341472 CCDC142Q17RM4 750 aa21.56■■□□□ 1.04
SYNE2-201ENST00000341472 TMEM150AQ86TG1 271 aa21.56■■□□□ 1.04
SYNE2-201ENST00000341472 OR6B3Q8NGW1 331 aa21.56■■□□□ 1.04
SYNE2-201ENST00000341472 FAM3CQ92520 227 aa21.56■■□□□ 1.04
SYNE2-201ENST00000341472 MRPS31Q92665 395 aaKnown RBP21.56■■□□□ 1.04
SYNE2-201ENST00000341472 SYAP1Q96A49 352 aaPredicted RBP21.56■■□□□ 1.04
SYNE2-201ENST00000341472 MRPL45Q9BRJ2 306 aaKnown RBP21.56■■□□□ 1.04
SYNE2-201ENST00000341472 UXTQ9UBK9 157 aaPredicted RBP21.56■■□□□ 1.04
SYNE2-201ENST00000341472 NXF1Q9UBU9 619 aaKnown RBP21.56■■□□□ 1.04
SYNE2-201ENST00000341472 PIAS3Q9Y6X2 628 aa21.56■■□□□ 1.04
SYNE2-201ENST00000341472 NCANO14594 1321 aa21.55■■□□□ 1.04
SYNE2-201ENST00000341472 SHISA7A6NL88 538 aa21.55■■□□□ 1.04
SYNE2-201ENST00000341472 SOBPA7XYQ1 873 aa21.55■■□□□ 1.04
SYNE2-201ENST00000341472 CALUO43852 315 aaPredicted RBP21.55■■□□□ 1.04
SYNE2-201ENST00000341472 NOL4O94818 638 aa21.55■■□□□ 1.04
SYNE2-201ENST00000341472 RHOBTB3O94955 611 aa21.55■■□□□ 1.04
SYNE2-201ENST00000341472 STAU1O95793 577 aaKnown RBP21.55■■□□□ 1.04
SYNE2-201ENST00000341472 PRR29P0C7W0 189 aa21.55■■□□□ 1.04
SYNE2-201ENST00000341472 PSMC1P62191 440 aaKnown RBP21.55■■□□□ 1.04
SYNE2-201ENST00000341472 CLDN10P78369 228 aa21.55■■□□□ 1.04
SYNE2-201ENST00000341472 DPYDQ12882 1025 aa21.55■■□□□ 1.04
SYNE2-201ENST00000341472 ARHGAP29Q52LW3 1261 aa21.55■■□□□ 1.04
SYNE2-201ENST00000341472 MON1AQ86VX9 555 aa21.55■■□□□ 1.04
SYNE2-201ENST00000341472 CMTM8Q8IZV2 173 aa21.55■■□□□ 1.04
SYNE2-201ENST00000341472 CELF5Q8N6W0 485 aaKnown RBP21.55■■□□□ 1.04
SYNE2-201ENST00000341472 MAB21L3Q8N8X9 362 aa21.55■■□□□ 1.04
SYNE2-201ENST00000341472 PLEKHO2Q8TD55 490 aa21.55■■□□□ 1.04
SYNE2-201ENST00000341472 BPIFB1Q8TDL5 484 aa21.55■■□□□ 1.04
SYNE2-201ENST00000341472 NKD2Q969F2 451 aaPredicted RBP21.55■■□□□ 1.04
SYNE2-201ENST00000341472 MYLPFQ96A32 169 aa21.55■■□□□ 1.04
SYNE2-201ENST00000341472 CCDC34Q96HJ3 373 aa21.55■■□□□ 1.04
SYNE2-201ENST00000341472 GOLPH3LQ9H4A5 285 aa21.55■■□□□ 1.04
SYNE2-201ENST00000341472 CRTAC1Q9NQ79 661 aa21.55■■□□□ 1.04
SYNE2-201ENST00000341472 THG1LQ9NWX6 298 aaKnown RBP21.55■■□□□ 1.04
SYNE2-201ENST00000341472 NDRG2Q9UN36 371 aaKnown RBP21.55■■□□□ 1.04
SYNE2-201ENST00000341472 F5P12259 2224 aa21.55■■□□□ 1.04
SYNE2-201ENST00000341472 ARNTLO00327 626 aa21.54■■□□□ 1.04
SYNE2-201ENST00000341472 LAMTOR5O43504 91 aa21.54■■□□□ 1.04
SYNE2-201ENST00000341472 C4BPAP04003 597 aaKnown RBP21.54■■□□□ 1.04
SYNE2-201ENST00000341472 SP9P0CG40 484 aa21.54■■□□□ 1.04
SYNE2-201ENST00000341472 AVPR1AP37288 418 aa21.54■■□□□ 1.04
SYNE2-201ENST00000341472 KPNA1P52294 538 aaPredicted RBP21.54■■□□□ 1.04
SYNE2-201ENST00000341472 NUCB2P80303 420 aa21.54■■□□□ 1.04
SYNE2-201ENST00000341472 CYP27A1Q02318 531 aa21.54■■□□□ 1.04
SYNE2-201ENST00000341472 CEP135Q66GS9 1140 aa21.54■■□□□ 1.04
SYNE2-201ENST00000341472 TXNDC8Q6A555 127 aa21.54■■□□□ 1.04
SYNE2-201ENST00000341472 VSTM1Q6UX27 236 aa21.54■■□□□ 1.04
SYNE2-201ENST00000341472 STKLD1Q8NE28 680 aa21.54■■□□□ 1.04
SYNE2-201ENST00000341472 MYCBPAPQ8TBZ2 947 aa21.54■■□□□ 1.04
SYNE2-201ENST00000341472 MYRFLQ96LU7 910 aa21.54■■□□□ 1.04
SYNE2-201ENST00000341472 SMG9Q9H0W8 520 aaKnown RBP21.54■■□□□ 1.04
SYNE2-201ENST00000341472 XYLT2Q9H1B5 865 aa21.54■■□□□ 1.04
SYNE2-201ENST00000341472 C8orf33Q9H7E9 229 aaPredicted RBP21.54■■□□□ 1.04
SYNE2-201ENST00000341472 FRMD4BQ9Y2L6 1034 aa21.54■■□□□ 1.04
SYNE2-201ENST00000341472 RIF1Q5UIP0 2472 aaKnown RBP21.53■■□□□ 1.04
SYNE2-201ENST00000341472 LRRIQ3A6PVS8 624 aaPredicted RBP21.53■■□□□ 1.04
SYNE2-201ENST00000341472 PRAMEF12O95522 483 aa21.53■■□□□ 1.04
SYNE2-201ENST00000341472 PTPN1P18031 435 aaKnown RBP21.53■■□□□ 1.04
SYNE2-201ENST00000341472 BDNFP23560 247 aa21.53■■□□□ 1.04
SYNE2-201ENST00000341472 GRIK1P39086 918 aa21.53■■□□□ 1.04
SYNE2-201ENST00000341472 RPS9P46781 194 aaKnown RBP21.53■■□□□ 1.04
SYNE2-201ENST00000341472 PLCB2Q00722 1185 aa21.53■■□□□ 1.04
SYNE2-201ENST00000341472 FZD5Q13467 585 aa21.53■■□□□ 1.04
SYNE2-201ENST00000341472 NCOA4Q13772 614 aa21.53■■□□□ 1.04
SYNE2-201ENST00000341472 TDRD10Q5VZ19 366 aaKnown RBP21.53■■□□□ 1.04
SYNE2-201ENST00000341472 ASCL5Q7RTU5 278 aa21.53■■□□□ 1.04
SYNE2-201ENST00000341472 TMC2Q8TDI7 906 aa21.53■■□□□ 1.04
SYNE2-201ENST00000341472 TRMT2BQ96GJ1 504 aaKnown RBP21.53■■□□□ 1.04
SYNE2-201ENST00000341472 LMAN1LQ9HAT1 526 aa21.53■■□□□ 1.04
SYNE2-201ENST00000341472 TRAF3IP3Q9Y228 551 aa21.53■■□□□ 1.04
SYNE2-201ENST00000341472 ANK1P16157 1881 aa21.53■■□□□ 1.04
SYNE2-201ENST00000341472 GOLGA6L4A6NEF3 574 aa21.52■■□□□ 1.04
SYNE2-201ENST00000341472 CCNE1P24864 410 aa21.52■■□□□ 1.04
SYNE2-201ENST00000341472 ANP32AP39687 249 aaKnown RBP21.52■■□□□ 1.04
SYNE2-201ENST00000341472 KCNB1Q14721 858 aa21.52■■□□□ 1.04
SYNE2-201ENST00000341472 MDH1BQ5I0G3 518 aa21.52■■□□□ 1.04
SYNE2-201ENST00000341472 C1orf228Q6PIY5 440 aa21.52■■□□□ 1.04
SYNE2-201ENST00000341472 MAML2Q8IZL2 1156 aaPredicted RBP21.52■■□□□ 1.04
SYNE2-201ENST00000341472 ZNF687Q8N1G0 1237 aa21.52■■□□□ 1.04
SYNE2-201ENST00000341472 MSANTD3Q96H12 275 aa21.52■■□□□ 1.04
SYNE2-201ENST00000341472 PCED1BQ96HM7 432 aa21.52■■□□□ 1.04
SYNE2-201ENST00000341472 ZFYVE19Q96K21 471 aa21.52■■□□□ 1.04
SYNE2-201ENST00000341472 SPATA17Q96L03 361 aa21.52■■□□□ 1.04
SYNE2-201ENST00000341472 CEP295NLQ96MC4 621 aa21.52■■□□□ 1.04
SYNE2-201ENST00000341472 SEMA4AQ9H3S1 761 aa21.52■■□□□ 1.04
SYNE2-201ENST00000341472 VRTNQ9H8Y1 702 aa21.52■■□□□ 1.04
SYNE2-201ENST00000341472 GKN1Q9NS71 199 aa21.52■■□□□ 1.04
SYNE2-201ENST00000341472 MAPK8IP1Q9UQF2 711 aa21.52■■□□□ 1.04
SYNE2-201ENST00000341472 PRR23AA6NEV1 266 aa21.51■■□□□ 1.03
SYNE2-201ENST00000341472 A8MXQ7 604 aa21.51■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms