RNA–Protein interactions for RNA: ENST00000341460.5

SYDE2-202, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYDE2, Length 5,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-202ENST00000341460 MAP3K4Q9Y6R4 1608 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 FDX1P10109 184 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 AKR1B1P15121 316 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 ITGA8P53708 1063 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 GEMIN4P57678 1058 aaKnown RBP18.3■□□□□ 0.52
SYDE2-202ENST00000341460 PSMC5P62195 406 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 DDR1Q08345 913 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 SWSAP1Q6NVH7 229 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 SHC4Q6S5L8 630 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 GUF1Q8N442 669 aaKnown RBP18.3■□□□□ 0.52
SYDE2-202ENST00000341460 PDCD6IPQ8WUM4 868 aaKnown RBP18.3■□□□□ 0.52
SYDE2-202ENST00000341460 INTS2Q9H0H0 1204 aaKnown RBP18.3■□□□□ 0.52
SYDE2-202ENST00000341460 GABBR1Q9UBS5 961 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 ATP6V1HQ9UI12 483 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 FAM196BA6NMK8 535 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 F5H6K3 240 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 SNAP23O00161 211 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 ABLIM1O14639 778 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 CNOT3O75175 753 aaKnown RBP18.3■□□□□ 0.52
SYDE2-202ENST00000341460 CYP19A1P11511 503 aaPredicted RBP18.3■□□□□ 0.52
SYDE2-202ENST00000341460 SDC4P31431 198 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 KLRC3Q07444 240 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 ADGRF4Q8IZF3 695 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 FNIP1Q8TF40 1166 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 WNK4Q96J92 1243 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 FCGR1AP12314 374 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 PIK3R1P27986 724 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 CHN2P52757 468 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 GPSM2P81274 684 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 AARS2Q5JTZ9 985 aaKnown RBP18.3■□□□□ 0.52
SYDE2-202ENST00000341460 C3orf62Q6ZUJ4 267 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 METTL16Q86W50 562 aaKnown RBP18.3■□□□□ 0.52
SYDE2-202ENST00000341460 ARHGEF19Q8IW93 802 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 ZBTB39O15060 712 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 QRICH1Q2TAL8 776 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 CCDC153Q494R4 210 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 SCN4BQ8IWT1 228 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 SLC35G2Q8TBE7 412 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 STAP1Q9ULZ2 295 aa18.3■□□□□ 0.52
SYDE2-202ENST00000341460 RPS6KA5O75582 802 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 MYCP01106 439 aaPredicted RBP18.29■□□□□ 0.52
SYDE2-202ENST00000341460 PEX5P50542 639 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 PURAQ00577 322 aaKnown RBP18.29■□□□□ 0.52
SYDE2-202ENST00000341460 COX10Q12887 443 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 SLC10A5Q5PT55 438 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 IFT43Q96FT9 208 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 EGFL8Q99944 293 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 C17orf80Q9BSJ5 609 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 ZFYVE1Q9HBF4 777 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 XRCC4Q13426 336 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 MYBPC2Q14324 1141 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 GSTA3Q16772 222 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 ITPRIPL1Q6GPH6 555 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 KBTBD2Q8IY47 623 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 SYTL1Q8IYJ3 562 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 SKA1Q96BD8 255 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 OSBPL10Q9BXB5 764 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 KRT87PA6NCN2 255 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 FOXN1O15353 648 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 TRAF3Q13114 568 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 NAB2Q15742 525 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 RNF19BQ6ZMZ0 732 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 UBE2Q1Q7Z7E8 422 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 SYNE4Q8N205 404 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 ELMOD1Q8N336 334 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 MRPL4Q9BYD3 311 aaKnown RBP18.29■□□□□ 0.52
SYDE2-202ENST00000341460 EPB41L4AQ9HCS5 686 aaPredicted RBP18.29■□□□□ 0.52
SYDE2-202ENST00000341460 CLIC5Q9NZA1 410 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 PCSK1NQ9UHG2 260 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 RAB21Q9UL25 225 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 TRPC5OSA6NMA1 111 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 MAP3K13O43283 966 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 MYBL2P10244 700 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 EPHB2P29323 1055 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 RPL5P46777 297 aaKnown RBP18.29■□□□□ 0.52
SYDE2-202ENST00000341460 EIF3EP60228 445 aaKnown RBP18.29■□□□□ 0.52
SYDE2-202ENST00000341460 LRRC49Q8IUZ0 686 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 MARCH10Q8NA82 808 aaPredicted RBP18.29■□□□□ 0.52
SYDE2-202ENST00000341460 MMTAG2Q9BU76 263 aaKnown RBP18.29■□□□□ 0.52
SYDE2-202ENST00000341460 TMEM120AQ9BXJ8 343 aa18.29■□□□□ 0.52
SYDE2-202ENST00000341460 ABCC3O15438 1527 aa18.28■□□□□ 0.52
SYDE2-202ENST00000341460 M0QYV0 167 aa18.28■□□□□ 0.52
SYDE2-202ENST00000341460 BTN3A3O00478 584 aa18.28■□□□□ 0.52
SYDE2-202ENST00000341460 USP11P51784 963 aa18.28■□□□□ 0.52
SYDE2-202ENST00000341460 CASP5P51878 434 aa18.28■□□□□ 0.52
SYDE2-202ENST00000341460 THOC7Q6I9Y2 204 aaKnown RBP18.28■□□□□ 0.52
SYDE2-202ENST00000341460 C11orf88Q6PI97 169 aa18.28■□□□□ 0.52
SYDE2-202ENST00000341460 ATG14Q6ZNE5 492 aa18.28■□□□□ 0.52
SYDE2-202ENST00000341460 RDM1Q8NG50 284 aa18.28■□□□□ 0.52
SYDE2-202ENST00000341460 URGCPQ8TCY9 931 aa18.28■□□□□ 0.52
SYDE2-202ENST00000341460 TADA1Q96BN2 335 aa18.28■□□□□ 0.52
SYDE2-202ENST00000341460 POLIQ9UNA4 740 aa18.28■□□□□ 0.52
SYDE2-202ENST00000341460 RTN2O75298 545 aa18.28■□□□□ 0.52
SYDE2-202ENST00000341460 SASH3O75995 380 aa18.28■□□□□ 0.52
SYDE2-202ENST00000341460 FMR1Q06787 632 aaKnown RBP eCLIP18.28■□□□□ 0.525e-9■■■■□ 21.7
SYDE2-202ENST00000341460 SPP2Q13103 211 aa18.28■□□□□ 0.52
SYDE2-202ENST00000341460 POTEGQ6S5H5 508 aa18.28■□□□□ 0.52
SYDE2-202ENST00000341460 ISCA1Q9BUE6 129 aa18.28■□□□□ 0.52
SYDE2-202ENST00000341460 POLR3FQ9H1D9 316 aaPredicted RBP18.28■□□□□ 0.52
SYDE2-202ENST00000341460 ACAD9Q9H845 621 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms