RNA–Protein interactions for RNA: ENST00000341062.6

TRIM60-201, Transcript of tripartite motif containing 60, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM60, Length 1,867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60-201ENST00000341062 ROPN1BQ9BZX4 212 aaPredicted RBP14.18□□□□□ -0.14
TRIM60-201ENST00000341062 STMN4Q9H169 189 aaPredicted RBP14.18□□□□□ -0.14
TRIM60-201ENST00000341062 ROPN1Q9HAT0 212 aaPredicted RBP14.18□□□□□ -0.14
TRIM60-201ENST00000341062 CISHQ9NSE2 258 aa14.18□□□□□ -0.14
TRIM60-201ENST00000341062 FAM169AQ9Y6X4 670 aa14.18□□□□□ -0.14
TRIM60-201ENST00000341062 GMNCA6NCL1 334 aa14.17□□□□□ -0.14
TRIM60-201ENST00000341062 KPNA6O60684 536 aa14.17□□□□□ -0.14
TRIM60-201ENST00000341062 IQCF3P0C7M6 154 aa14.17□□□□□ -0.14
TRIM60-201ENST00000341062 EIF4BP23588 611 aaKnown RBP14.17□□□□□ -0.14
TRIM60-201ENST00000341062 YWHAEP62258 255 aaKnown RBP14.17□□□□□ -0.14
TRIM60-201ENST00000341062 SCARA3Q6AZY7 606 aa14.17□□□□□ -0.14
TRIM60-201ENST00000341062 PHLDB2Q86SQ0 1253 aa14.17□□□□□ -0.14
TRIM60-201ENST00000341062 RHPN2Q8IUC4 686 aa14.17□□□□□ -0.14
TRIM60-201ENST00000341062 TMEM35BQ8NCS4 154 aa14.17□□□□□ -0.14
TRIM60-201ENST00000341062 KATNAL1Q9BW62 490 aa14.17□□□□□ -0.14
TRIM60-201ENST00000341062 XYLT2Q9H1B5 865 aa14.17□□□□□ -0.14
TRIM60-201ENST00000341062 RASSF4Q9H2L5 321 aa14.17□□□□□ -0.14
TRIM60-201ENST00000341062 AAASQ9NRG9 546 aa14.17□□□□□ -0.14
TRIM60-201ENST00000341062 ASIC3Q9UHC3 531 aa14.17□□□□□ -0.14
TRIM60-201ENST00000341062 COL1A2P08123 1366 aa14.17□□□□□ -0.14
TRIM60-201ENST00000341062 SCN5AQ14524 2016 aa14.17□□□□□ -0.14
TRIM60-201ENST00000341062 TRIM66O15016 1216 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 FGFR4P22455 802 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 PTPN7P35236 360 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 CETN2P41208 172 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 ASPAP45381 313 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 MMP13P45452 471 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 CDK7P50613 346 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 SEC24CP53992 1094 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 POU5F1BQ06416 359 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 TRPC3Q13507 836 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 KIZQ2M2Z5 673 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 PPP1R15BQ5SWA1 713 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 ATF7IP2Q5U623 682 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 MICALCLQ6ZW33 695 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 YTHDF3Q7Z739 585 aaKnown RBP14.16□□□□□ -0.14
TRIM60-201ENST00000341062 CCDC50Q8IVM0 306 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 RCOR2Q8IZ40 523 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 NIPA2Q8N8Q9 360 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 BBOF1Q8ND07 529 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 TMEM40Q8WWA1 233 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 ATG4AQ8WYN0 398 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 RBM41Q96IZ5 413 aaKnown RBP14.16□□□□□ -0.14
TRIM60-201ENST00000341062 TRAIPQ9BWF2 469 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 RABEP2Q9H5N1 569 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 TNFSF13BQ9Y275 285 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 R3HDM2Q9Y2K5 976 aaKnown RBP14.16□□□□□ -0.14
TRIM60-201ENST00000341062 CDH23Q9H251 3354 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 E7EVH7 732 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 O00370 1275 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 RGS16O15492 202 aaPredicted RBP14.16□□□□□ -0.14
TRIM60-201ENST00000341062 IL18RAPO95256 599 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 TNNC2P02585 160 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 TMOD1P28289 359 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 MBTD1Q05BQ5 628 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 SNX1Q13596 522 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 ZNF699Q32M78 642 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 DRICH1Q6PGQ1 229 aaPredicted RBP14.16□□□□□ -0.14
TRIM60-201ENST00000341062 RELL1Q8IUW5 271 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 CCDC89Q8N998 374 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 NLRP4Q96MN2 994 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 CDC42EP4Q9H3Q1 356 aaKnown RBP14.16□□□□□ -0.14
TRIM60-201ENST00000341062 AKT3Q9Y243 479 aa14.16□□□□□ -0.14
TRIM60-201ENST00000341062 A0A087WUV0 522 aaPredicted RBP14.15□□□□□ -0.14
TRIM60-201ENST00000341062 A0A087WZ62 844 aa14.15□□□□□ -0.14
TRIM60-201ENST00000341062 C5orf60A6NFR6 353 aa14.15□□□□□ -0.14
TRIM60-201ENST00000341062 ARVCFO00192 962 aa14.15□□□□□ -0.14
TRIM60-201ENST00000341062 GPR32O75388 356 aa14.15□□□□□ -0.14
TRIM60-201ENST00000341062 CTSHP09668 335 aa14.15□□□□□ -0.14
TRIM60-201ENST00000341062 ATF2P15336 505 aa14.15□□□□□ -0.14
TRIM60-201ENST00000341062 COPS2P61201 443 aa14.15□□□□□ -0.14
TRIM60-201ENST00000341062 RPL7AP62424 266 aaKnown RBP14.15□□□□□ -0.14
TRIM60-201ENST00000341062 TFAMQ00059 246 aaKnown RBP14.15□□□□□ -0.14
TRIM60-201ENST00000341062 LMNB2Q03252 620 aa14.15□□□□□ -0.14
TRIM60-201ENST00000341062 ZNF252P-AS1Q0IIN9 211 aa14.15□□□□□ -0.14
TRIM60-201ENST00000341062 NFX1Q12986 1120 aaKnown RBP14.15□□□□□ -0.14
TRIM60-201ENST00000341062 PIGHQ14442 188 aaPredicted RBP14.15□□□□□ -0.14
TRIM60-201ENST00000341062 LLGL1Q15334 1064 aa14.15□□□□□ -0.14
TRIM60-201ENST00000341062 FAM187BQ17R55 369 aa14.15□□□□□ -0.14
TRIM60-201ENST00000341062 SKIDA1Q1XH10 827 aa14.15□□□□□ -0.14
TRIM60-201ENST00000341062 LRRC26Q2I0M4 334 aa14.15□□□□□ -0.14
TRIM60-201ENST00000341062 TRIM60Q495X7 471 aa14.15□□□□□ -0.14
TRIM60-201ENST00000341062 DAB2IPQ5VWQ8 1189 aa14.15□□□□□ -0.14
TRIM60-201ENST00000341062 SERINC5Q86VE9 423 aa14.15□□□□□ -0.14
TRIM60-201ENST00000341062 IFNLR1Q8IU57 520 aaPredicted RBP14.15□□□□□ -0.14
TRIM60-201ENST00000341062 C10orf67Q8IYJ2 551 aa14.15□□□□□ -0.14
TRIM60-201ENST00000341062 RAPGEF5Q92565 580 aa14.15□□□□□ -0.14
TRIM60-201ENST00000341062 ANKRD36BP1Q96IX9 119 aa14.15□□□□□ -0.14
TRIM60-201ENST00000341062 FDXACB1Q9BRP7 624 aaPredicted RBP14.15□□□□□ -0.14
TRIM60-201ENST00000341062 FOXP3Q9BZS1 431 aa14.15□□□□□ -0.14
TRIM60-201ENST00000341062 IFT122Q9HBG6 1241 aa14.15□□□□□ -0.14
TRIM60-201ENST00000341062 PPANQ9NQ55 473 aaKnown RBP14.15□□□□□ -0.14
TRIM60-201ENST00000341062 STRIP2Q9ULQ0 834 aa14.15□□□□□ -0.14
TRIM60-201ENST00000341062 GINS2Q9Y248 185 aa14.15□□□□□ -0.14
TRIM60-201ENST00000341062 RRN3P2A6NIE6 340 aa14.14□□□□□ -0.15
TRIM60-201ENST00000341062 RASGRF2O14827 1237 aa14.14□□□□□ -0.15
TRIM60-201ENST00000341062 PQBP1O60828 265 aaKnown RBP14.14□□□□□ -0.15
TRIM60-201ENST00000341062 BRD2P25440 801 aaKnown RBP14.14□□□□□ -0.15
TRIM60-201ENST00000341062 SSTR3P32745 418 aaPredicted RBP14.14□□□□□ -0.15
TRIM60-201ENST00000341062 TRIM71Q2Q1W2 868 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms