RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 M0QYT0 321 aa20.16■□□□□ 0.82
CDK13-202ENST00000340829 SPRP35270 261 aaPredicted RBP20.16■□□□□ 0.82
CDK13-202ENST00000340829 HADHAP40939 763 aa20.16■□□□□ 0.82
CDK13-202ENST00000340829 NIPA1Q7RTP0 329 aa20.16■□□□□ 0.82
CDK13-202ENST00000340829 AGGF1Q8N302 714 aaeCLIP20.16■□□□□ 0.828e-7■■□□□ 13.3
CDK13-202ENST00000340829 SPDYE1Q8NFV5 336 aaPredicted RBP20.16■□□□□ 0.82
CDK13-202ENST00000340829 GIPC2Q8TF65 315 aa20.16■□□□□ 0.82
CDK13-202ENST00000340829 PNPLA4P41247 253 aa20.16■□□□□ 0.82
CDK13-202ENST00000340829 SPIRE2Q8WWL2 714 aa20.16■□□□□ 0.82
CDK13-202ENST00000340829 STAMBPL1Q96FJ0 436 aa20.16■□□□□ 0.82
CDK13-202ENST00000340829 FAM111AQ96PZ2 611 aa20.16■□□□□ 0.82
CDK13-202ENST00000340829 PDE2AO00408 941 aaPredicted RBP20.16■□□□□ 0.82
CDK13-202ENST00000340829 HOXD10P28358 340 aa20.16■□□□□ 0.82
CDK13-202ENST00000340829 HUNKP57058 714 aa20.16■□□□□ 0.82
CDK13-202ENST00000340829 TGFB2P61812 414 aa20.16■□□□□ 0.82
CDK13-202ENST00000340829 DLG4P78352 724 aa20.16■□□□□ 0.82
CDK13-202ENST00000340829 IMPG1Q17R60 797 aa20.16■□□□□ 0.82
CDK13-202ENST00000340829 DNERQ8NFT8 737 aa20.16■□□□□ 0.82
CDK13-202ENST00000340829 FAM172AQ8WUF8 416 aa20.16■□□□□ 0.82
CDK13-202ENST00000340829 KRT35Q92764 455 aa20.16■□□□□ 0.82
CDK13-202ENST00000340829 KAT5Q92993 513 aa20.16■□□□□ 0.82
CDK13-202ENST00000340829 ASIC4Q96FT7 647 aa20.16■□□□□ 0.82
CDK13-202ENST00000340829 ELMO2Q96JJ3 720 aa20.16■□□□□ 0.82
CDK13-202ENST00000340829 LRRC4BQ9NT99 713 aa20.16■□□□□ 0.82
CDK13-202ENST00000340829 IFT172Q9UG01 1749 aa20.16■□□□□ 0.82
CDK13-202ENST00000340829 RCCD1A6NED2 376 aa20.15■□□□□ 0.82
CDK13-202ENST00000340829 GFAPP14136 432 aa20.15■□□□□ 0.82
CDK13-202ENST00000340829 EPHB2P29323 1055 aa20.15■□□□□ 0.82
CDK13-202ENST00000340829 PHEXP78562 749 aa20.15■□□□□ 0.82
CDK13-202ENST00000340829 CNTN2Q02246 1040 aa20.15■□□□□ 0.82
CDK13-202ENST00000340829 ACCSLQ4AC99 568 aa20.15■□□□□ 0.82
CDK13-202ENST00000340829 COBLL1Q53SF7 1204 aa20.15■□□□□ 0.82
CDK13-202ENST00000340829 TFB1MQ8WVM0 346 aaKnown RBP20.15■□□□□ 0.82
CDK13-202ENST00000340829 ZNF606Q8WXB4 792 aa20.15■□□□□ 0.82
CDK13-202ENST00000340829 ZBTB45Q96K62 511 aaPredicted RBP20.15■□□□□ 0.82
CDK13-202ENST00000340829 MMTAG2Q9BU76 263 aaKnown RBP20.15■□□□□ 0.82
CDK13-202ENST00000340829 NDFIP2Q9NV92 336 aa20.15■□□□□ 0.82
CDK13-202ENST00000340829 MRC1P22897 1456 aa20.15■□□□□ 0.82
CDK13-202ENST00000340829 PTPN11Q06124 597 aaPredicted RBP20.15■□□□□ 0.82
CDK13-202ENST00000340829 KCNMA1Q12791 1236 aa20.15■□□□□ 0.82
CDK13-202ENST00000340829 E2F7Q96AV8 911 aa20.15■□□□□ 0.82
CDK13-202ENST00000340829 ARHGEF38Q9NXL2 777 aa20.15■□□□□ 0.82
CDK13-202ENST00000340829 MON2Q7Z3U7 1717 aa20.15■□□□□ 0.82
CDK13-202ENST00000340829 PSMD10O75832 226 aa20.15■□□□□ 0.82
CDK13-202ENST00000340829 FGRP09769 529 aa20.15■□□□□ 0.82
CDK13-202ENST00000340829 CHI3L2Q15782 390 aa20.15■□□□□ 0.82
CDK13-202ENST00000340829 CCNG2Q16589 344 aa20.15■□□□□ 0.82
CDK13-202ENST00000340829 UGP2Q16851 508 aa20.15■□□□□ 0.82
CDK13-202ENST00000340829 SLC25A41Q8N5S1 370 aa20.15■□□□□ 0.82
CDK13-202ENST00000340829 TNFRSF25Q93038 417 aa20.15■□□□□ 0.82
CDK13-202ENST00000340829 CENPKQ9BS16 269 aa20.15■□□□□ 0.82
CDK13-202ENST00000340829 WDR18Q9BV38 432 aa20.15■□□□□ 0.82
CDK13-202ENST00000340829 DDIT4Q9NX09 232 aa20.15■□□□□ 0.82
CDK13-202ENST00000340829 AP3B1O00203 1094 aa20.15■□□□□ 0.82
CDK13-202ENST00000340829 IGF2BP3O00425 579 aaKnown RBP eCLIP20.15■□□□□ 0.82
CDK13-202ENST00000340829 HNRNPCL1O60812 293 aaKnown RBP20.15■□□□□ 0.82
CDK13-202ENST00000340829 PTGER2P43116 358 aa20.15■□□□□ 0.82
CDK13-202ENST00000340829 MROH8Q9H579 483 aa20.15■□□□□ 0.82
CDK13-202ENST00000340829 SLC40A1Q9NP59 571 aa20.15■□□□□ 0.82
CDK13-202ENST00000340829 ACO1P21399 889 aaKnown RBP20.14■□□□□ 0.82
CDK13-202ENST00000340829 FKBP1AP62942 108 aaKnown RBP20.14■□□□□ 0.82
CDK13-202ENST00000340829 PPP3CAQ08209 521 aa20.14■□□□□ 0.82
CDK13-202ENST00000340829 DENND5BQ6ZUT9 1274 aa20.14■□□□□ 0.82
CDK13-202ENST00000340829 OLA1Q9NTK5 396 aaKnown RBP20.14■□□□□ 0.82
CDK13-202ENST00000340829 USP18Q9UMW8 372 aa20.14■□□□□ 0.82
CDK13-202ENST00000340829 LSM8O95777 96 aaKnown RBP20.14■□□□□ 0.81
CDK13-202ENST00000340829 CYP2C8P10632 490 aa20.14■□□□□ 0.81
CDK13-202ENST00000340829 TMEM259Q4ZIN3 620 aa20.14■□□□□ 0.81
CDK13-202ENST00000340829 LRRC6Q86X45 466 aa20.14■□□□□ 0.81
CDK13-202ENST00000340829 TMEM176AQ96HP8 235 aa20.14■□□□□ 0.81
CDK13-202ENST00000340829 GLIS2Q9BZE0 524 aaPredicted RBP20.14■□□□□ 0.81
CDK13-202ENST00000340829 AFF4Q9UHB7 1163 aaKnown RBP20.14■□□□□ 0.81
CDK13-202ENST00000340829 GRID1Q9ULK0 1009 aa20.14■□□□□ 0.81
CDK13-202ENST00000340829 CELF2O95319 508 aaKnown RBP20.14■□□□□ 0.81
CDK13-202ENST00000340829 MCL1Q07820 350 aa20.14■□□□□ 0.81
CDK13-202ENST00000340829 RAET1EQ8TD07 263 aa20.14■□□□□ 0.81
CDK13-202ENST00000340829 TRAPPC12Q8WVT3 735 aa20.14■□□□□ 0.81
CDK13-202ENST00000340829 ADARB2Q9NS39 739 aaKnown RBP20.14■□□□□ 0.81
CDK13-202ENST00000340829 PSMD3O43242 534 aa20.14■□□□□ 0.81
CDK13-202ENST00000340829 ZNF286BP0CG31 522 aa20.14■□□□□ 0.81
CDK13-202ENST00000340829 ACTL9Q8TC94 416 aa20.14■□□□□ 0.81
CDK13-202ENST00000340829 AENQ8WTP8 325 aaKnown RBP20.14■□□□□ 0.81
CDK13-202ENST00000340829 ZNF446Q9NWS9 450 aa20.14■□□□□ 0.81
CDK13-202ENST00000340829 SLIT3O75094 1523 aa20.14■□□□□ 0.81
CDK13-202ENST00000340829 ATXN8OSP0DMR3 200 aa20.13■□□□□ 0.81
CDK13-202ENST00000340829 CPT1AP50416 773 aa20.13■□□□□ 0.81
CDK13-202ENST00000340829 GCNT1Q02742 428 aa20.13■□□□□ 0.81
CDK13-202ENST00000340829 VEPH1Q14D04 833 aa20.13■□□□□ 0.81
CDK13-202ENST00000340829 ANO4Q32M45 955 aa20.13■□□□□ 0.81
CDK13-202ENST00000340829 MAP4K3Q8IVH8 894 aa20.13■□□□□ 0.81
CDK13-202ENST00000340829 SEPT5Q99719 369 aaPredicted RBP20.13■□□□□ 0.81
CDK13-202ENST00000340829 YIPF3Q9GZM5 350 aa20.13■□□□□ 0.81
CDK13-202ENST00000340829 ACP6Q9NPH0 428 aa20.13■□□□□ 0.81
CDK13-202ENST00000340829 MTO1Q9Y2Z2 717 aaKnown RBP20.13■□□□□ 0.81
CDK13-202ENST00000340829 ASTN1O14525 1302 aa20.13■□□□□ 0.81
CDK13-202ENST00000340829 PIK3C2AO00443 1686 aa20.13■□□□□ 0.81
CDK13-202ENST00000340829 RNF103-CHMP3A0A140T963 221 aa20.13■□□□□ 0.81
CDK13-202ENST00000340829 NFKBIAP25963 317 aa20.13■□□□□ 0.81
CDK13-202ENST00000340829 CPA2P48052 419 aa20.13■□□□□ 0.81
CDK13-202ENST00000340829 GLB1LQ6UWU2 654 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms