RNA–Protein interactions for RNA: ENST00000340006.6

CSRP1-201, Transcript of cysteine and glycine rich protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSRP1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-201ENST00000340006 BACE2Q9Y5Z0 518 aa15.66■□□□□ 0.1
CSRP1-201ENST00000340006 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.65■□□□□ 0.1
CSRP1-201ENST00000340006 FAM170AA1A519 330 aa15.65■□□□□ 0.1
CSRP1-201ENST00000340006 CLDN5O00501 218 aa15.65■□□□□ 0.1
CSRP1-201ENST00000340006 DNAJB1P25685 340 aa15.65■□□□□ 0.1
CSRP1-201ENST00000340006 MTF1Q14872 753 aa15.65■□□□□ 0.1
CSRP1-201ENST00000340006 STILQ15468 1287 aa15.65■□□□□ 0.1
CSRP1-201ENST00000340006 PLPP4Q5VZY2 271 aa15.65■□□□□ 0.1
CSRP1-201ENST00000340006 FAM171BQ6P995 826 aa15.65■□□□□ 0.1
CSRP1-201ENST00000340006 RSPO2Q6UXX9 243 aaPredicted RBP15.65■□□□□ 0.1
CSRP1-201ENST00000340006 RAD9BQ6WBX8 426 aa15.65■□□□□ 0.1
CSRP1-201ENST00000340006 C4orf50Q6ZRC1 276 aa15.65■□□□□ 0.1
CSRP1-201ENST00000340006 PASD1Q8IV76 773 aa15.65■□□□□ 0.1
CSRP1-201ENST00000340006 UBA3Q8TBC4 463 aa15.65■□□□□ 0.1
CSRP1-201ENST00000340006 DDX1Q92499 740 aaKnown RBP15.65■□□□□ 0.1
CSRP1-201ENST00000340006 PCED1BQ96HM7 432 aa15.65■□□□□ 0.1
CSRP1-201ENST00000340006 PGLYRP2Q96PD5 576 aa15.65■□□□□ 0.1
CSRP1-201ENST00000340006 CLSTN3Q9BQT9 956 aa15.65■□□□□ 0.1
CSRP1-201ENST00000340006 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.65■□□□□ 0.1
CSRP1-201ENST00000340006 TSPAN16Q9UKR8 245 aa15.65■□□□□ 0.1
CSRP1-201ENST00000340006 CEP83Q9Y592 693 aa15.65■□□□□ 0.1
CSRP1-201ENST00000340006 ZNF500O60304 480 aaPredicted RBP15.64■□□□□ 0.09
CSRP1-201ENST00000340006 CFHP08603 1231 aa15.64■□□□□ 0.09
CSRP1-201ENST00000340006 SLC8A3P57103 927 aa15.64■□□□□ 0.09
CSRP1-201ENST00000340006 SMC1AQ14683 1233 aaKnown RBP15.64■□□□□ 0.09
CSRP1-201ENST00000340006 NFE2Q16621 373 aaPredicted RBP15.64■□□□□ 0.09
CSRP1-201ENST00000340006 CCDC142Q17RM4 750 aa15.64■□□□□ 0.09
CSRP1-201ENST00000340006 GOLGA7BQ2TAP0 167 aa15.64■□□□□ 0.09
CSRP1-201ENST00000340006 PALB2Q86YC2 1186 aa15.64■□□□□ 0.09
CSRP1-201ENST00000340006 ZSWIM1Q9BR11 485 aa15.64■□□□□ 0.09
CSRP1-201ENST00000340006 B3GNT5Q9BYG0 378 aa15.64■□□□□ 0.09
CSRP1-201ENST00000340006 TMLHEQ9NVH6 421 aa15.64■□□□□ 0.09
CSRP1-201ENST00000340006 A0A1W2PPC1 479 aa15.64■□□□□ 0.09
CSRP1-201ENST00000340006 SSU72P8A0A1W2PR75 194 aa15.64■□□□□ 0.09
CSRP1-201ENST00000340006 TMCO5BA8MYB1 307 aa15.64■□□□□ 0.09
CSRP1-201ENST00000340006 M0QYV0 167 aa15.64■□□□□ 0.09
CSRP1-201ENST00000340006 O00370 1275 aa15.64■□□□□ 0.09
CSRP1-201ENST00000340006 TBC1D4O60343 1298 aa15.64■□□□□ 0.09
CSRP1-201ENST00000340006 MICAL2O94851 1124 aa15.64■□□□□ 0.09
CSRP1-201ENST00000340006 ATXN8OSP0DMR3 200 aa15.64■□□□□ 0.09
CSRP1-201ENST00000340006 CHRNB2P17787 502 aa15.64■□□□□ 0.09
CSRP1-201ENST00000340006 CYLC1P35663 651 aaPredicted RBP15.64■□□□□ 0.09
CSRP1-201ENST00000340006 FMO1Q01740 532 aa15.64■□□□□ 0.09
CSRP1-201ENST00000340006 CREMQ03060 361 aa15.64■□□□□ 0.09
CSRP1-201ENST00000340006 MAPK8IP2Q13387 824 aaPredicted RBP15.64■□□□□ 0.09
CSRP1-201ENST00000340006 PTPN14Q15678 1187 aa15.64■□□□□ 0.09
CSRP1-201ENST00000340006 LRIT3Q3SXY7 679 aa15.64■□□□□ 0.09
CSRP1-201ENST00000340006 LCLAT1Q6UWP7 414 aa15.64■□□□□ 0.09
CSRP1-201ENST00000340006 TOGARAM2Q6ZUX3 1019 aa15.64■□□□□ 0.09
CSRP1-201ENST00000340006 CCDC170Q8IYT3 715 aa15.64■□□□□ 0.09
CSRP1-201ENST00000340006 MRPL43Q8N983 215 aaKnown RBP15.64■□□□□ 0.09
CSRP1-201ENST00000340006 MYLPFQ96A32 169 aa15.64■□□□□ 0.09
CSRP1-201ENST00000340006 HNRNPABQ99729 332 aaKnown RBP15.64■□□□□ 0.09
CSRP1-201ENST00000340006 EMILIN2Q9BXX0 1053 aa15.64■□□□□ 0.09
CSRP1-201ENST00000340006 NGRNQ9NPE2 291 aaKnown RBP15.64■□□□□ 0.09
CSRP1-201ENST00000340006 RRAGDQ9NQL2 400 aaPredicted RBP15.64■□□□□ 0.09
CSRP1-201ENST00000340006 ABI2Q9NYB9 513 aaPredicted RBP15.64■□□□□ 0.09
CSRP1-201ENST00000340006 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.64■□□□□ 0.09
CSRP1-201ENST00000340006 ADAM12O43184 909 aa15.63■□□□□ 0.09
CSRP1-201ENST00000340006 BDNFP23560 247 aa15.63■□□□□ 0.09
CSRP1-201ENST00000340006 KLRC2P26717 231 aa15.63■□□□□ 0.09
CSRP1-201ENST00000340006 GFPT1Q06210 699 aaPredicted RBP15.63■□□□□ 0.09
CSRP1-201ENST00000340006 GPR17Q13304 367 aa15.63■□□□□ 0.09
CSRP1-201ENST00000340006 ARHGAP17Q68EM7 881 aa15.63■□□□□ 0.09
CSRP1-201ENST00000340006 SLC8B1Q6J4K2 584 aa15.63■□□□□ 0.09
CSRP1-201ENST00000340006 RNF19BQ6ZMZ0 732 aa15.63■□□□□ 0.09
CSRP1-201ENST00000340006 FUKQ8N0W3 1084 aa15.63■□□□□ 0.09
CSRP1-201ENST00000340006 ANKRD52Q8NB46 1076 aa15.63■□□□□ 0.09
CSRP1-201ENST00000340006 CPA5Q8WXQ8 436 aa15.63■□□□□ 0.09
CSRP1-201ENST00000340006 SPTLC3Q9NUV7 552 aa15.63■□□□□ 0.09
CSRP1-201ENST00000340006 FNIP2Q9P278 1114 aa15.63■□□□□ 0.09
CSRP1-201ENST00000340006 PCDHGC3Q9UN70 934 aa15.63■□□□□ 0.09
CSRP1-201ENST00000340006 PCDHB5Q9Y5E4 795 aa15.63■□□□□ 0.09
CSRP1-201ENST00000340006 EPN1Q9Y6I3 576 aaPredicted RBP15.63■□□□□ 0.09
CSRP1-201ENST00000340006 ATP8B3O60423 1300 aa15.62■□□□□ 0.09
CSRP1-201ENST00000340006 A0A087X0T9 212 aa15.62■□□□□ 0.09
CSRP1-201ENST00000340006 RFXAPO00287 272 aa15.62■□□□□ 0.09
CSRP1-201ENST00000340006 TEX28O15482 410 aa15.62■□□□□ 0.09
CSRP1-201ENST00000340006 IPO7O95373 1038 aaKnown RBP15.62■□□□□ 0.09
CSRP1-201ENST00000340006 CNPP09543 421 aaKnown RBP15.62■□□□□ 0.09
CSRP1-201ENST00000340006 FAM228BP0C875 321 aa15.62■□□□□ 0.09
CSRP1-201ENST00000340006 GRIK1P39086 918 aa15.62■□□□□ 0.09
CSRP1-201ENST00000340006 KIF11P52732 1056 aa15.62■□□□□ 0.09
CSRP1-201ENST00000340006 ADCY1Q08828 1119 aa15.62■□□□□ 0.09
CSRP1-201ENST00000340006 SMARCB1Q12824 385 aa15.62■□□□□ 0.09
CSRP1-201ENST00000340006 SPA17Q15506 151 aa15.62■□□□□ 0.09
CSRP1-201ENST00000340006 CCDC122Q5T0U0 273 aa15.62■□□□□ 0.09
CSRP1-201ENST00000340006 DENND1BQ6P3S1 775 aa15.62■□□□□ 0.09
CSRP1-201ENST00000340006 GPR65Q8IYL9 337 aa15.62■□□□□ 0.09
CSRP1-201ENST00000340006 ATAD1Q8NBU5 361 aa15.62■□□□□ 0.09
CSRP1-201ENST00000340006 TMEM35BQ8NCS4 154 aa15.62■□□□□ 0.09
CSRP1-201ENST00000340006 ZNF461Q8TAF7 563 aa15.62■□□□□ 0.09
CSRP1-201ENST00000340006 ZNF576Q9H609 170 aa15.62■□□□□ 0.09
CSRP1-201ENST00000340006 SLC27A5Q9Y2P5 690 aa15.62■□□□□ 0.09
CSRP1-201ENST00000340006 CDH23Q9H251 3354 aa15.62■□□□□ 0.09
CSRP1-201ENST00000340006 C2orf71A6NGG8 1288 aa15.62■□□□□ 0.09
CSRP1-201ENST00000340006 USP27XA6NNY8 438 aa15.62■□□□□ 0.09
CSRP1-201ENST00000340006 HIDE1A8MVS5 230 aa15.62■□□□□ 0.09
CSRP1-201ENST00000340006 DDX3XO00571 662 aaKnown RBP eCLIP15.62■□□□□ 0.094e-6■■■■□ 24.2
CSRP1-201ENST00000340006 LILRB3O75022 631 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms