RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 FKBP1AP62942 108 aaKnown RBP12.76□□□□□ -0.37
FN1-202ENST00000336916 CLEC17AQ6ZS10 378 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 BSNDQ8WZ55 320 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 YIPF2Q9BWQ6 316 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 TRPM5Q9NZQ8 1165 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 LIMA1Q9UHB6 759 aaKnown RBP12.76□□□□□ -0.37
FN1-202ENST00000336916 DTNAQ9Y4J8 743 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 RAD54BQ9Y620 910 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 THPOP40225 353 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 ADCK2Q7Z695 626 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 HS6ST3Q8IZP7 471 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 ZBTB9Q96C00 473 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 VPS50Q96JG6 964 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 AIFM3Q96NN9 605 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 ELAC2Q9BQ52 826 aaKnown RBP12.76□□□□□ -0.37
FN1-202ENST00000336916 SRGNP10124 158 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 UCHL3P15374 230 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 FKBP1CQ5VVH2 108 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 RBBP8NLQ8NC74 664 aaPredicted RBP12.76□□□□□ -0.37
FN1-202ENST00000336916 IGDCC4Q8TDY8 1250 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 VPS51Q9UID3 782 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 MAGEB16A2A368 324 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 XYLBO75191 536 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 EXOSC10Q01780 885 aaKnown RBP12.76□□□□□ -0.37
FN1-202ENST00000336916 PKN2Q16513 984 aaKnown RBP12.76□□□□□ -0.37
FN1-202ENST00000336916 SLC35G2Q8TBE7 412 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 MAGEC3Q8TD91 643 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 GPR101Q96P66 508 aaPredicted RBP12.76□□□□□ -0.37
FN1-202ENST00000336916 PDGFCQ9NRA1 345 aa12.76□□□□□ -0.37
FN1-202ENST00000336916 DCDC2Q9UHG0 476 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 PHF20L1A8MW92 1017 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 EIF2S1P05198 315 aaKnown RBP12.75□□□□□ -0.37
FN1-202ENST00000336916 CHRNA5P30532 468 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 HSPA13P48723 471 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 GMPSP49915 693 aaPredicted RBP12.75□□□□□ -0.37
FN1-202ENST00000336916 ZNF284Q2VY69 593 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 METTL3Q86U44 580 aaKnown RBP12.75□□□□□ -0.37
FN1-202ENST00000336916 CHSY1Q86X52 802 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 FEZF2Q8TBJ5 459 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 SERPINB12Q96P63 405 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 TMEM237Q96Q45 408 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 MTG1Q9BT17 334 aaPredicted RBP12.75□□□□□ -0.37
FN1-202ENST00000336916 EPS8L2Q9H6S3 715 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 WDR41Q9HAD4 459 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 VTA1Q9NP79 307 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 C20orf96Q9NUD7 363 aaPredicted RBP12.75□□□□□ -0.37
FN1-202ENST00000336916 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.75□□□□□ -0.37
FN1-202ENST00000336916 CRLS1Q9UJA2 301 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 MAPRE3Q9UPY8 281 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 RP1L1Q8IWN7 2480 aaPredicted RBP12.75□□□□□ -0.37
FN1-202ENST00000336916 KRR1Q13601 381 aaKnown RBP12.75□□□□□ -0.37
FN1-202ENST00000336916 MYBPC2Q14324 1141 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 LCA5Q86VQ0 697 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 TMEM143Q96AN5 459 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 ZMAT2Q96NC0 199 aaKnown RBP12.75□□□□□ -0.37
FN1-202ENST00000336916 SYNDIG1Q9H7V2 258 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 AHSPQ9NZD4 102 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 SEPT3Q9UH03 358 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 OGTO15294 1046 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 B3GAT3O94766 335 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 SNRPAP09012 282 aaKnown RBP12.75□□□□□ -0.37
FN1-202ENST00000336916 SLC39A10Q9ULF5 831 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 SNX12Q9UMY4 172 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 CAND2O75155 1236 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 TKTP29401 623 aaKnown RBP12.75□□□□□ -0.37
FN1-202ENST00000336916 PLA2G4AP47712 749 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 ACOT2P49753 483 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 CAMK2GQ13555 558 aaPredicted RBP12.75□□□□□ -0.37
FN1-202ENST00000336916 TMEM259Q4ZIN3 620 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 RASGRP2Q7LDG7 609 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 HORMAD1Q86X24 394 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 TSPAN18Q96SJ8 248 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 DNAJC7Q99615 494 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 ANLNQ9NQW6 1124 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 TTC26A0AVF1 554 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 SUPT3HB4E1H0 165 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 CYP26A1O43174 497 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 POU4F1Q01851 419 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 HIBCHQ6NVY1 386 aaPredicted RBP12.75□□□□□ -0.37
FN1-202ENST00000336916 REM2Q8IYK8 340 aaPredicted RBP12.75□□□□□ -0.37
FN1-202ENST00000336916 KCNH7Q9NS40 1196 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 NR2E3Q9Y5X4 410 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 VWA5AO00534 786 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 ASS1P00966 412 aaKnown RBP12.75□□□□□ -0.37
FN1-202ENST00000336916 CLCN6P51797 869 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 PCNX4Q63HM2 1172 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 PPIL6Q8IXY8 311 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 FBXO32Q969P5 355 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 TMEM260Q9NX78 707 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 SFMBT1Q9UHJ3 866 aa12.75□□□□□ -0.37
FN1-202ENST00000336916 ATP9BO43861 1147 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 SLC9A1P19634 815 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 SIRT2Q8IXJ6 389 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 MMGT1Q8N4V1 131 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 SPATA4Q8NEY3 305 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 NEU2Q9Y3R4 380 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 SLC9A3R1O14745 358 aaPredicted RBP12.74□□□□□ -0.37
FN1-202ENST00000336916 TM9SF1O15321 606 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 C4BPBP20851 252 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 GOLGA7BQ2TAP0 167 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms