RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 PMS2P54278 862 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 MAGOHP61326 146 aaKnown RBP13.28□□□□□ -0.28
LIMK1-201ENST00000336180 SOX4Q06945 474 aaPredicted RBP13.28□□□□□ -0.28
LIMK1-201ENST00000336180 C1QBPQ07021 282 aaKnown RBP13.28□□□□□ -0.28
LIMK1-201ENST00000336180 GNASQ5JWF2 1037 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 CYP4F22Q6NT55 531 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 LEKR1Q6ZMV7 388 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 TBK1Q9UHD2 729 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 CNTN6Q9UQ52 1028 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 NR2E3Q9Y5X4 410 aa13.28□□□□□ -0.28
LIMK1-201ENST00000336180 GOLGA6L10A6NI86 522 aa13.27□□□□□ -0.28
LIMK1-201ENST00000336180 H0YGN5 161 aa13.27□□□□□ -0.28
LIMK1-201ENST00000336180 FSCN2O14926 492 aa13.27□□□□□ -0.28
LIMK1-201ENST00000336180 CILPO75339 1184 aa13.27□□□□□ -0.28
LIMK1-201ENST00000336180 MYZAPP0CAP1 466 aa13.27□□□□□ -0.28
LIMK1-201ENST00000336180 PSEN2P49810 448 aa13.27□□□□□ -0.28
LIMK1-201ENST00000336180 MCCD1P59942 119 aaPredicted RBP13.27□□□□□ -0.28
LIMK1-201ENST00000336180 IFI35P80217 286 aaPredicted RBP13.27□□□□□ -0.28
LIMK1-201ENST00000336180 LONRF1Q17RB8 773 aa13.27□□□□□ -0.28
LIMK1-201ENST00000336180 IQSEC1Q6DN90 963 aa13.27□□□□□ -0.28
LIMK1-201ENST00000336180 TWF2Q6IBS0 349 aaKnown RBP13.27□□□□□ -0.28
LIMK1-201ENST00000336180 TRNP1Q6NT89 227 aa13.27□□□□□ -0.28
LIMK1-201ENST00000336180 CFAP57Q96MR6 1250 aa13.27□□□□□ -0.28
LIMK1-201ENST00000336180 CAPS2Q9BXY5 557 aa13.27□□□□□ -0.28
LIMK1-201ENST00000336180 GCOM2Q9BZD3 368 aaPredicted RBP13.27□□□□□ -0.28
LIMK1-201ENST00000336180 EPB41L4BQ9H329 900 aa13.27□□□□□ -0.28
LIMK1-201ENST00000336180 GNEQ9Y223 722 aaKnown RBP13.27□□□□□ -0.28
LIMK1-201ENST00000336180 NFS1Q9Y697 457 aa13.27□□□□□ -0.28
LIMK1-201ENST00000336180 RBM47A0AV96 593 aaKnown RBP13.27□□□□□ -0.29
LIMK1-201ENST00000336180 I3L4J1 428 aa13.27□□□□□ -0.29
LIMK1-201ENST00000336180 KYNUQ16719 465 aa13.27□□□□□ -0.29
LIMK1-201ENST00000336180 ICE2Q659A1 982 aa13.27□□□□□ -0.29
LIMK1-201ENST00000336180 TRPV1Q8NER1 839 aa13.27□□□□□ -0.29
LIMK1-201ENST00000336180 LRRC45Q96CN5 670 aa13.27□□□□□ -0.29
LIMK1-201ENST00000336180 NGRNQ9NPE2 291 aaKnown RBP13.27□□□□□ -0.29
LIMK1-201ENST00000336180 SCINQ9Y6U3 715 aa13.27□□□□□ -0.29
LIMK1-201ENST00000336180 IL18RAPO95256 599 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 MYBL1P10243 752 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 LCP1P13796 627 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 ELNP15502 786 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 NR1D1P20393 614 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 SURF1Q15526 300 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 PMF1Q6P1K2 205 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 TRIM72Q6ZMU5 477 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 HASPINQ8TF76 798 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 AP5M1Q9H0R1 490 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 IP6K2Q9UHH9 426 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 ATP8B3O60423 1300 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 PASKQ96RG2 1323 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 SLC15A5A6NIM6 579 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 GOLGA8KD6RF30 607 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 CLDN5O00501 218 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 LRCH4O75427 683 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 IRAK1P51617 712 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 CALCOCO2Q13137 446 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 BIRC2Q13490 618 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 SNX17Q15036 470 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 XYLT1Q86Y38 959 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 EXOC8Q8IYI6 725 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 MGARPQ8TDB4 240 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 TRIM11Q96F44 468 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 SLITRK1Q96PX8 696 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 SELENOSQ9BQE4 189 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 A8MXQ7 604 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 CALB1P05937 261 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 FGFR1P11362 822 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 ACTN2P35609 894 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 CCT5P48643 541 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 AP3M2P53677 418 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 RBP5P82980 135 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 DHX34Q14147 1143 aaKnown RBP13.26□□□□□ -0.29
LIMK1-201ENST00000336180 SMAD1Q15797 465 aaKnown RBP13.26□□□□□ -0.29
LIMK1-201ENST00000336180 MORN1Q5T089 497 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 FAM183BPQ6ZVS7 135 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 ZNF365Q70YC5 407 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 ZC3H18Q86VM9 953 aaKnown RBP13.26□□□□□ -0.29
LIMK1-201ENST00000336180 ATP6V1G3Q96LB4 118 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 LCMT1Q9UIC8 334 aa13.26□□□□□ -0.29
LIMK1-201ENST00000336180 A6NJR5 290 aa13.25□□□□□ -0.29
LIMK1-201ENST00000336180 TP73O15350 636 aa13.25□□□□□ -0.29
LIMK1-201ENST00000336180 CREB1P16220 341 aa13.25□□□□□ -0.29
LIMK1-201ENST00000336180 EIF4BP23588 611 aaKnown RBP13.25□□□□□ -0.29
LIMK1-201ENST00000336180 FSCN1Q16658 493 aaKnown RBP13.25□□□□□ -0.29
LIMK1-201ENST00000336180 P3H1Q32P28 736 aa13.25□□□□□ -0.29
LIMK1-201ENST00000336180 SAPCD2Q86UD0 394 aa13.25□□□□□ -0.29
LIMK1-201ENST00000336180 FAM81BQ96LP2 452 aa13.25□□□□□ -0.29
LIMK1-201ENST00000336180 BCO2Q9BYV7 579 aa13.25□□□□□ -0.29
LIMK1-201ENST00000336180 PCYOX1Q9UHG3 505 aa13.25□□□□□ -0.29
LIMK1-201ENST00000336180 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.25□□□□□ -0.29
LIMK1-201ENST00000336180 FAM187AA6NFU0 413 aa13.25□□□□□ -0.29
LIMK1-201ENST00000336180 SGK1O00141 431 aa13.25□□□□□ -0.29
LIMK1-201ENST00000336180 F2P00734 622 aa13.25□□□□□ -0.29
LIMK1-201ENST00000336180 DARSP14868 501 aaKnown RBP13.25□□□□□ -0.29
LIMK1-201ENST00000336180 ATF2P15336 505 aa13.25□□□□□ -0.29
LIMK1-201ENST00000336180 GDF10P55107 478 aa13.25□□□□□ -0.29
LIMK1-201ENST00000336180 YWHAEP62258 255 aaKnown RBP13.25□□□□□ -0.29
LIMK1-201ENST00000336180 FASTKD3Q14CZ7 662 aaKnown RBP13.25□□□□□ -0.29
LIMK1-201ENST00000336180 DENND2CQ68D51 928 aa13.25□□□□□ -0.29
LIMK1-201ENST00000336180 SPOCD1Q6ZMY3 1216 aa13.25□□□□□ -0.29
LIMK1-201ENST00000336180 TTC30AQ86WT1 665 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms