RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 TCHHL1Q5QJ38 904 aaPredicted RBP10.18□□□□□ -0.78
COL4A6-201ENST00000334504 EFL1Q7Z2Z2 1120 aaKnown RBP10.18□□□□□ -0.78
COL4A6-201ENST00000334504 CHSY1Q86X52 802 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 KCTD17Q8N5Z5 321 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 TMEM47Q9BQJ4 181 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 BTBD10Q9BSF8 475 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 EPB41L4AQ9HCS5 686 aaPredicted RBP10.18□□□□□ -0.78
COL4A6-201ENST00000334504 PBRM1Q86U86 1689 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 LSM1O15116 133 aaKnown RBP10.18□□□□□ -0.78
COL4A6-201ENST00000334504 GLRA3O75311 464 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 POU1F1P28069 291 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 CCNA1P78396 465 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 DEFB107AQ8IZN7 70 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 SPATA18Q8TC71 538 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 ANKS1AQ92625 1134 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 ZNF668Q96K58 619 aaPredicted RBP10.18□□□□□ -0.78
COL4A6-201ENST00000334504 YIPF2Q9BWQ6 316 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 ZFYVE1Q9HBF4 777 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 AGO2Q9UKV8 859 aaKnown RBP10.18□□□□□ -0.78
COL4A6-201ENST00000334504 CHKBQ9Y259 395 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 MYRFQ9Y2G1 1151 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 TCOF1Q13428 1488 aaKnown RBP10.18□□□□□ -0.78
COL4A6-201ENST00000334504 MLH3Q9UHC1 1453 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 BIVM-ERCC5R4GMW8 1640 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 USP17L10C9JJH3 530 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 E9PBE3 544 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 PPEF1O14829 653 aaPredicted RBP10.18□□□□□ -0.78
COL4A6-201ENST00000334504 KLHL41O60662 606 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 CYP2E1P05181 493 aaPredicted RBP10.18□□□□□ -0.78
COL4A6-201ENST00000334504 CACNB2Q08289 660 aaPredicted RBP10.18□□□□□ -0.78
COL4A6-201ENST00000334504 KLHL23Q8NBE8 558 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 SH3RF3Q8TEJ3 882 aaPredicted RBP10.18□□□□□ -0.78
COL4A6-201ENST00000334504 KRT35Q92764 455 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 LXNQ9BS40 222 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 MTA3Q9BTC8 594 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 TOPORSQ9NS56 1045 aaPredicted RBP10.18□□□□□ -0.78
COL4A6-201ENST00000334504 CENPXA8MT69 81 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 NR5A2O00482 541 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 FOSL2P15408 326 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 PECAM1P16284 738 aaPredicted RBP10.18□□□□□ -0.78
COL4A6-201ENST00000334504 RRM2P31350 389 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 FMO5P49326 533 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 PEX5P50542 639 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 NCALDP61601 193 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 TRAF3Q13114 568 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 ALDH8A1Q9H2A2 487 aaPredicted RBP10.18□□□□□ -0.78
COL4A6-201ENST00000334504 ZNF521Q96K83 1311 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 F8W810 466 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 PDGFRAP16234 1089 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 RGS7P49802 495 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 RPS7P62081 194 aaKnown RBP10.18□□□□□ -0.78
COL4A6-201ENST00000334504 GRM4Q14833 912 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 ATPAF2Q8N5M1 289 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 FAM45AQ8TCE6 357 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 RNFT2Q96EX2 444 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 APOL5Q9BWW9 433 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 BARHL2Q9NY43 387 aa10.18□□□□□ -0.78
COL4A6-201ENST00000334504 PCP4L1A6NKN8 68 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 SNTNA6NMZ2 147 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 P4HBP07237 508 aaKnown RBP10.17□□□□□ -0.78
COL4A6-201ENST00000334504 RALAP11233 206 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 EPHB2P29323 1055 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 GUCY1A2P33402 732 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 ELF3P78545 371 aaPredicted RBP10.17□□□□□ -0.78
COL4A6-201ENST00000334504 CDK17Q00537 523 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 CYP51A1Q16850 503 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 SMTNL2Q2TAL5 461 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 TMEM63BQ5T3F8 832 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 BTBD8Q5XKL5 378 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 IL31Q6EBC2 164 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 PPP1R18Q6NYC8 613 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 KRT73Q86Y46 540 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 CHORDC1Q9UHD1 332 aaPredicted RBP10.17□□□□□ -0.78
COL4A6-201ENST00000334504 RUVBL2Q9Y230 463 aaKnown RBP10.17□□□□□ -0.78
COL4A6-201ENST00000334504 PLEKHG2Q9H7P9 1386 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 KANSL1LA0AUZ9 987 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 FEN1P39748 380 aaKnown RBP10.17□□□□□ -0.78
COL4A6-201ENST00000334504 CSE1LP55060 971 aaKnown RBP10.17□□□□□ -0.78
COL4A6-201ENST00000334504 POU4F1Q01851 419 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 GALNTL6Q49A17 601 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 PPP1R14BQ96C90 147 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 KCTD14Q9BQ13 255 aaPredicted RBP10.17□□□□□ -0.78
COL4A6-201ENST00000334504 MRPL4Q9BYD3 311 aaKnown RBP10.17□□□□□ -0.78
COL4A6-201ENST00000334504 PIF1Q9H611 641 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 AVENQ9NQS1 362 aaPredicted RBP10.17□□□□□ -0.78
COL4A6-201ENST00000334504 PI4KBQ9UBF8 816 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 PDS5AQ29RF7 1337 aaKnown RBP10.17□□□□□ -0.78
COL4A6-201ENST00000334504 PIK3R1P27986 724 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 ERFEQ4G0M1 354 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 TYW3Q6IPR3 259 aaKnown RBP10.17□□□□□ -0.78
COL4A6-201ENST00000334504 TPCN2Q8NHX9 752 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 SH3TC2Q8TF17 1288 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 STK32AQ8WU08 396 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 ZNF669Q96BR6 464 aaPredicted RBP10.17□□□□□ -0.78
COL4A6-201ENST00000334504 ZNF302Q9NR11 478 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 LATS2Q9NRM7 1088 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 EURLQ9NYK6 297 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 RWDD3Q9Y3V2 267 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 EEF2KO00418 725 aaKnown RBP10.17□□□□□ -0.78
COL4A6-201ENST00000334504 POLD3Q15054 466 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms