RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 GEMIN4P57678 1058 aaKnown RBP10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 UGP2Q16851 508 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 ACCSLQ4AC99 568 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 KCNT1Q5JUK3 1230 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 FBXO11Q86XK2 927 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 GRID1Q9ULK0 1009 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 UBAP1LF5GYI3 381 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 PSEN1P49768 467 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 GMFBP60983 142 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 ZNF200P98182 395 aaPredicted RBP10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 EIF2B5Q13144 721 aaKnown RBP10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 PABPC4Q13310 644 aaKnown RBP eCLIP10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 CBFBQ13951 182 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 LRRC41Q15345 812 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 ZNF284Q2VY69 593 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 IZUMO3Q5VZ72 239 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 ZNF57Q68EA5 555 aaPredicted RBP10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 CHURC1Q8WUH1 139 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 FAM213AQ9BRX8 229 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 SLC26A4O43511 780 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 UNC5CO95185 931 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 CCNA2P20248 432 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 CNTFP26441 200 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 RPS7P62081 194 aaKnown RBP10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 PRKCQQ04759 706 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 RBBP4Q09028 425 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 GRSF1Q12849 480 aaKnown RBP eCLIP10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 TCIRG1Q13488 830 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 RHOT1Q8IXI2 618 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 TDRD5Q8NAT2 981 aaKnown RBP10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 RBBP8Q99708 897 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 ZNF577Q9BSK1 485 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 OSBPL11Q9BXB4 747 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 GRIP2Q9C0E4 1043 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 GGA1Q9UJY5 639 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 PHF8Q9UPP1 1060 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 DGKIO75912 1065 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 STAT5AP42229 794 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 STAT5BP51692 787 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 LRRC47Q8N1G4 583 aaKnown RBP10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 DPP10Q8N608 796 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 ASIC4Q96FT7 647 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 DNAAF2Q9NVR5 837 aaKnown RBP10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 MARCOQ9UEW3 520 aaPredicted RBP10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 MLXQ9UH92 298 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 STARD13Q9Y3M8 1113 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 E9PCH4 1651 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 SESN2P58004 480 aaPredicted RBP10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 ARF3P61204 181 aaPredicted RBP10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 ARF1P84077 181 aaKnown RBP10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 KIZQ2M2Z5 673 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 CCSAPQ6IQ19 270 aaPredicted RBP10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 ZBTB49Q6ZSB9 765 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 ENOSF1Q7L5Y1 443 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 OR6Y1Q8NGX8 325 aa10.72□□□□□ -0.69
SPTBN1-201ENST00000333896 SLC45A4Q5BKX6 768 aa10.71□□□□□ -0.69
SPTBN1-201ENST00000333896 NFATC2IPQ8NCF5 419 aa10.71□□□□□ -0.69
SPTBN1-201ENST00000333896 NUP85Q9BW27 656 aa10.71□□□□□ -0.69
SPTBN1-201ENST00000333896 TFCP2L1Q9NZI6 479 aa10.71□□□□□ -0.69
SPTBN1-201ENST00000333896 BTBD18B2RXH4 712 aa10.71□□□□□ -0.69
SPTBN1-201ENST00000333896 SHOX2O60902 331 aaPredicted RBP10.71□□□□□ -0.69
SPTBN1-201ENST00000333896 SCGNO76038 276 aa10.71□□□□□ -0.69
SPTBN1-201ENST00000333896 SLC29A2Q14542 456 aa10.71□□□□□ -0.69
SPTBN1-201ENST00000333896 SUZ12Q15022 739 aaKnown RBP10.71□□□□□ -0.69
SPTBN1-201ENST00000333896 SLC5A9Q2M3M2 681 aa10.71□□□□□ -0.69
SPTBN1-201ENST00000333896 SHQ1Q6PI26 577 aaKnown RBP10.71□□□□□ -0.69
SPTBN1-201ENST00000333896 AGAP11Q8TF27 550 aa10.71□□□□□ -0.69
SPTBN1-201ENST00000333896 RNFT2Q96EX2 444 aa10.71□□□□□ -0.69
SPTBN1-201ENST00000333896 SP110Q9HB58 689 aa10.71□□□□□ -0.69
SPTBN1-201ENST00000333896 ZNF518AQ6AHZ1 1483 aa10.71□□□□□ -0.69
SPTBN1-201ENST00000333896 CPA3P15088 417 aa10.71□□□□□ -0.69
SPTBN1-201ENST00000333896 ROR1Q01973 937 aa10.71□□□□□ -0.69
SPTBN1-201ENST00000333896 KCNMA1Q12791 1236 aa10.71□□□□□ -0.69
SPTBN1-201ENST00000333896 RNF43Q68DV7 783 aa10.71□□□□□ -0.69
SPTBN1-201ENST00000333896 NEK5Q6P3R8 708 aa10.71□□□□□ -0.69
SPTBN1-201ENST00000333896 KIAA0408Q6ZU52 694 aa10.71□□□□□ -0.69
SPTBN1-201ENST00000333896 FASTKD5Q7L8L6 764 aaKnown RBP10.71□□□□□ -0.69
SPTBN1-201ENST00000333896 CLVS1Q8IUQ0 354 aaPredicted RBP10.71□□□□□ -0.69
SPTBN1-201ENST00000333896 FRMD8P1Q9BZ68 369 aaPredicted RBP10.71□□□□□ -0.69
SPTBN1-201ENST00000333896 PSMG1O95456 288 aa10.71□□□□□ -0.69
SPTBN1-201ENST00000333896 TFDP2Q14188 446 aa10.71□□□□□ -0.69
SPTBN1-201ENST00000333896 TSNQ15631 228 aaKnown RBP10.71□□□□□ -0.69
SPTBN1-201ENST00000333896 ZNF624Q9P2J8 865 aaPredicted RBP10.71□□□□□ -0.69
SPTBN1-201ENST00000333896 FADS3Q9Y5Q0 445 aa10.71□□□□□ -0.69
SPTBN1-201ENST00000333896 DFFAO00273 331 aa10.71□□□□□ -0.7
SPTBN1-201ENST00000333896 TAF5LO75529 589 aa10.71□□□□□ -0.7
SPTBN1-201ENST00000333896 PTH1RQ03431 593 aa10.71□□□□□ -0.7
SPTBN1-201ENST00000333896 ARHGEF6Q15052 776 aa10.71□□□□□ -0.7
SPTBN1-201ENST00000333896 TNFAIP8L3Q5GJ75 292 aa10.71□□□□□ -0.7
SPTBN1-201ENST00000333896 FAM83BQ5T0W9 1011 aa10.71□□□□□ -0.7
SPTBN1-201ENST00000333896 ACTRT1Q8TDG2 376 aa10.71□□□□□ -0.7
SPTBN1-201ENST00000333896 SH3TC2Q8TF17 1288 aa10.71□□□□□ -0.7
SPTBN1-201ENST00000333896 KLHL32Q96NJ5 620 aa10.71□□□□□ -0.7
SPTBN1-201ENST00000333896 ANKZF1Q9H8Y5 726 aa10.71□□□□□ -0.7
SPTBN1-201ENST00000333896 VPS45Q9NRW7 570 aa10.71□□□□□ -0.7
SPTBN1-201ENST00000333896 SPATA7Q9P0W8 599 aa10.71□□□□□ -0.7
SPTBN1-201ENST00000333896 PCDHA4Q9UN74 947 aa10.71□□□□□ -0.7
SPTBN1-201ENST00000333896 SLC12A4Q9UP95 1085 aa10.71□□□□□ -0.7
SPTBN1-201ENST00000333896 SH3BP1Q9Y3L3 701 aa10.71□□□□□ -0.7
SPTBN1-201ENST00000333896 LAMC3Q9Y6N6 1575 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms