RNA–Protein interactions for RNA: ENST00000332220.10

YBX1-202, Transcript of Y-box binding protein 1, humanhuman

TSL 5

Gene YBX1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-202ENST00000332220 ATF6P18850 670 aa22.3■■□□□ 1.16
YBX1-202ENST00000332220 TBXAS1P24557 533 aaPredicted RBP22.3■■□□□ 1.16
YBX1-202ENST00000332220 PON1P27169 355 aa22.3■■□□□ 1.16
YBX1-202ENST00000332220 GPR15P49685 360 aa22.3■■□□□ 1.16
YBX1-202ENST00000332220 NTHL1P78549 312 aa22.3■■□□□ 1.16
YBX1-202ENST00000332220 CYP27A1Q02318 531 aa22.3■■□□□ 1.16
YBX1-202ENST00000332220 KCNMA1Q12791 1236 aa22.3■■□□□ 1.16
YBX1-202ENST00000332220 CFAP221Q4G0U5 840 aa22.3■■□□□ 1.16
YBX1-202ENST00000332220 ZNF394Q53GI3 561 aa22.3■■□□□ 1.16
YBX1-202ENST00000332220 GJB7Q6PEY0 223 aa22.3■■□□□ 1.16
YBX1-202ENST00000332220 CYP26C1Q6V0L0 522 aa22.3■■□□□ 1.16
YBX1-202ENST00000332220 C4orf50Q6ZRC1 276 aa22.3■■□□□ 1.16
YBX1-202ENST00000332220 GRASPQ7Z6J2 395 aaPredicted RBP22.3■■□□□ 1.16
YBX1-202ENST00000332220 LUZP1Q86V48 1076 aa22.3■■□□□ 1.16
YBX1-202ENST00000332220 FUBP3Q96I24 572 aaKnown RBP eCLIP22.3■■□□□ 1.16
YBX1-202ENST00000332220 KREMEN1Q96MU8 473 aa22.3■■□□□ 1.16
YBX1-202ENST00000332220 NT5C1AQ9BXI3 368 aa22.3■■□□□ 1.16
YBX1-202ENST00000332220 B3GNT5Q9BYG0 378 aa22.3■■□□□ 1.16
YBX1-202ENST00000332220 ABCB6Q9NP58 842 aa22.3■■□□□ 1.16
YBX1-202ENST00000332220 SIX2Q9NPC8 291 aa22.3■■□□□ 1.16
YBX1-202ENST00000332220 BECN2A8MW95 431 aa22.29■■□□□ 1.16
YBX1-202ENST00000332220 CLDN5O00501 218 aa22.29■■□□□ 1.16
YBX1-202ENST00000332220 XYLBO75191 536 aa22.29■■□□□ 1.16
YBX1-202ENST00000332220 CDK11BP21127 795 aaKnown RBP22.29■■□□□ 1.16
YBX1-202ENST00000332220 BDNFP23560 247 aa22.29■■□□□ 1.16
YBX1-202ENST00000332220 TUFMP49411 452 aaKnown RBP22.29■■□□□ 1.16
YBX1-202ENST00000332220 GCNT1Q02742 428 aa22.29■■□□□ 1.16
YBX1-202ENST00000332220 DPY19L2P1Q6NXN4 242 aa22.29■■□□□ 1.16
YBX1-202ENST00000332220 LRSAM1Q6UWE0 723 aa22.29■■□□□ 1.16
YBX1-202ENST00000332220 PAQR9Q6ZVX9 377 aa22.29■■□□□ 1.16
YBX1-202ENST00000332220 C12orf29Q8N999 325 aa22.29■■□□□ 1.16
YBX1-202ENST00000332220 ZNF518BQ9C0D4 1074 aa22.29■■□□□ 1.16
YBX1-202ENST00000332220 FAM49BQ9NUQ9 324 aa22.29■■□□□ 1.16
YBX1-202ENST00000332220 TMEM30AQ9NV96 361 aa22.29■■□□□ 1.16
YBX1-202ENST00000332220 DNMT3BQ9UBC3 853 aaKnown RBP22.29■■□□□ 1.16
YBX1-202ENST00000332220 FAM50BQ9Y247 325 aa22.29■■□□□ 1.16
YBX1-202ENST00000332220 CCDC130P13994 396 aa22.28■■□□□ 1.16
YBX1-202ENST00000332220 ACO1P21399 889 aaKnown RBP22.28■■□□□ 1.16
YBX1-202ENST00000332220 ALDH1A3P47895 512 aa22.28■■□□□ 1.16
YBX1-202ENST00000332220 CACNA2D1P54289 1103 aa22.28■■□□□ 1.16
YBX1-202ENST00000332220 RAD23BP54727 409 aa22.28■■□□□ 1.16
YBX1-202ENST00000332220 TJAP1Q5JTD0 557 aa22.28■■□□□ 1.16
YBX1-202ENST00000332220 SDHAF4Q5VUM1 108 aa22.28■■□□□ 1.16
YBX1-202ENST00000332220 TTC39CQ8N584 583 aa22.28■■□□□ 1.16
YBX1-202ENST00000332220 SLC4A11Q8NBS3 891 aa22.28■■□□□ 1.16
YBX1-202ENST00000332220 STKLD1Q8NE28 680 aa22.28■■□□□ 1.16
YBX1-202ENST00000332220 ANKRD20A12PQ8NF67 263 aa22.28■■□□□ 1.16
YBX1-202ENST00000332220 GPR152Q8TDT2 470 aa22.28■■□□□ 1.16
YBX1-202ENST00000332220 NECTIN4Q96NY8 510 aa22.28■■□□□ 1.16
YBX1-202ENST00000332220 FAM124BQ9H5Z6 455 aaPredicted RBP22.28■■□□□ 1.16
YBX1-202ENST00000332220 WDR6Q9NNW5 1121 aaKnown RBP22.28■■□□□ 1.16
YBX1-202ENST00000332220 CLUHO75153 1309 aa22.28■■□□□ 1.16
YBX1-202ENST00000332220 LRRC10BA6NIK2 292 aa22.27■■□□□ 1.16
YBX1-202ENST00000332220 CAVIN2O95810 425 aa22.27■■□□□ 1.16
YBX1-202ENST00000332220 MAGEA11P43364 429 aa22.27■■□□□ 1.16
YBX1-202ENST00000332220 EPHB3P54753 998 aa22.27■■□□□ 1.16
YBX1-202ENST00000332220 YWHAEP62258 255 aaKnown RBP22.27■■□□□ 1.16
YBX1-202ENST00000332220 PLD1Q13393 1074 aa22.27■■□□□ 1.16
YBX1-202ENST00000332220 DDR2Q16832 855 aa22.27■■□□□ 1.16
YBX1-202ENST00000332220 FAM35AQ86V20 835 aa22.27■■□□□ 1.16
YBX1-202ENST00000332220 SCN4BQ8IWT1 228 aa22.27■■□□□ 1.16
YBX1-202ENST00000332220 HS6ST3Q8IZP7 471 aa22.27■■□□□ 1.16
YBX1-202ENST00000332220 FUKQ8N0W3 1084 aa22.27■■□□□ 1.16
YBX1-202ENST00000332220 FAM200AQ8TCP9 573 aa22.27■■□□□ 1.16
YBX1-202ENST00000332220 NUP210Q8TEM1 1887 aaPredicted RBP22.27■■□□□ 1.16
YBX1-202ENST00000332220 GIPC2Q8TF65 315 aa22.27■■□□□ 1.16
YBX1-202ENST00000332220 TSPY26PQ9H489 355 aa22.27■■□□□ 1.16
YBX1-202ENST00000332220 UBE2TQ9NPD8 197 aaPredicted RBP22.27■■□□□ 1.16
YBX1-202ENST00000332220 APEX2Q9UBZ4 518 aa22.27■■□□□ 1.16
YBX1-202ENST00000332220 AJAP1Q9UKB5 411 aaPredicted RBP22.27■■□□□ 1.16
YBX1-202ENST00000332220 LGALS16A8MUM7 142 aa22.26■■□□□ 1.15
YBX1-202ENST00000332220 TPM2P07951 284 aa22.26■■□□□ 1.15
YBX1-202ENST00000332220 PTPN2P17706 415 aa22.26■■□□□ 1.15
YBX1-202ENST00000332220 VSTM1Q6UX27 236 aa22.26■■□□□ 1.15
YBX1-202ENST00000332220 TMEM176AQ96HP8 235 aa22.26■■□□□ 1.15
YBX1-202ENST00000332220 ZNF512Q96ME7 567 aaPredicted RBP22.26■■□□□ 1.15
YBX1-202ENST00000332220 CORO1BQ9BR76 489 aa22.26■■□□□ 1.15
YBX1-202ENST00000332220 MED10Q9BTT4 135 aa22.26■■□□□ 1.15
YBX1-202ENST00000332220 PHF7Q9BWX1 381 aaPredicted RBP22.26■■□□□ 1.15
YBX1-202ENST00000332220 PCDHB4Q9Y5E5 795 aa22.26■■□□□ 1.15
YBX1-202ENST00000332220 TTC28Q96AY4 2481 aa22.25■■□□□ 1.15
YBX1-202ENST00000332220 RNF225M0QZC1 329 aaPredicted RBP22.25■■□□□ 1.15
YBX1-202ENST00000332220 NRG2O14511 850 aaPredicted RBP22.25■■□□□ 1.15
YBX1-202ENST00000332220 RHOP08100 348 aa22.25■■□□□ 1.15
YBX1-202ENST00000332220 SP100P23497 879 aaPredicted RBP22.25■■□□□ 1.15
YBX1-202ENST00000332220 KLK7P49862 253 aa22.25■■□□□ 1.15
YBX1-202ENST00000332220 PABPC1LQ4VXU2 614 aaKnown RBP22.25■■□□□ 1.15
YBX1-202ENST00000332220 TMEM270Q6UE05 265 aa22.25■■□□□ 1.15
YBX1-202ENST00000332220 ELMOD1Q8N336 334 aa22.25■■□□□ 1.15
YBX1-202ENST00000332220 SLC2A14Q8TDB8 520 aa22.25■■□□□ 1.15
YBX1-202ENST00000332220 LSM14BQ9BX40 385 aaKnown RBP22.25■■□□□ 1.15
YBX1-202ENST00000332220 LRRC3Q9BY71 257 aa22.25■■□□□ 1.15
YBX1-202ENST00000332220 ZNF334Q9HCZ1 680 aaPredicted RBP22.25■■□□□ 1.15
YBX1-202ENST00000332220 HELZP42694 1942 aaKnown RBP22.24■■□□□ 1.15
YBX1-202ENST00000332220 ADORA2BP29275 332 aa22.24■■□□□ 1.15
YBX1-202ENST00000332220 ZNF445P59923 1031 aa22.24■■□□□ 1.15
YBX1-202ENST00000332220 RPL10AP62906 217 aaKnown RBP22.24■■□□□ 1.15
YBX1-202ENST00000332220 MTMR3Q13615 1198 aa22.24■■□□□ 1.15
YBX1-202ENST00000332220 SLC5A9Q2M3M2 681 aa22.24■■□□□ 1.15
YBX1-202ENST00000332220 FKBP15Q5T1M5 1219 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms