RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 FAM131BQ86XD5 332 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 ADGRF2Q8IZF7 708 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 ACTL9Q8TC94 416 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 STMN2Q93045 179 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 PLEKHA5Q9HAU0 1116 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 ITGA11Q9UKX5 1188 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 COPEO14579 308 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 BNIP3LO60238 219 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 SEC24CP53992 1094 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 SP2Q02086 613 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 STAT4Q14765 748 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 MAP7D1Q3KQU3 841 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 EFHC1Q5JVL4 640 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 C4orf50Q6ZRC1 276 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 SDCCAG8Q86SQ7 713 aaPredicted RBP9.97□□□□□ -0.81
SS18L1-201ENST00000331758 EXD1Q8NHP7 514 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 FAM172AQ8WUF8 416 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 XPO7Q9UIA9 1087 aaKnown RBP9.97□□□□□ -0.81
SS18L1-201ENST00000331758 TLK1Q9UKI8 766 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 PCDHA3Q9Y5H8 950 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 A0A0G2JLL6 359 aaPredicted RBP9.97□□□□□ -0.81
SS18L1-201ENST00000331758 KBTBD13C9JR72 458 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 M0QYT0 321 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 GPR182O15218 404 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 CDH16O75309 829 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 KRT38O76015 456 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 ARF4P18085 180 aaPredicted RBP9.97□□□□□ -0.81
SS18L1-201ENST00000331758 MDH1P40925 334 aaKnown RBP9.97□□□□□ -0.81
SS18L1-201ENST00000331758 PPM1FP49593 454 aaPredicted RBP9.97□□□□□ -0.81
SS18L1-201ENST00000331758 THOC5Q13769 683 aaKnown RBP9.97□□□□□ -0.81
SS18L1-201ENST00000331758 MFSD7Q6UXD7 560 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 KDELC2Q7Z4H8 507 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 PRRT2Q7Z6L0 340 aaPredicted RBP9.97□□□□□ -0.81
SS18L1-201ENST00000331758 SCUBE3Q8IX30 993 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 CCT6BQ92526 530 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 PCDHB18PQ96TA0 734 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 EPAS1Q99814 870 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 SLC13A1Q9BZW2 595 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 PABPC3Q9H361 631 aaKnown RBP9.97□□□□□ -0.81
SS18L1-201ENST00000331758 BFARQ9NZS9 450 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 USP18Q9UMW8 372 aa9.97□□□□□ -0.81
SS18L1-201ENST00000331758 MAFBQ9Y5Q3 323 aaPredicted RBP9.97□□□□□ -0.81
SS18L1-201ENST00000331758 CCDC78A2IDD5 438 aa9.96□□□□□ -0.81
SS18L1-201ENST00000331758 TYW5A2RUC4 315 aaKnown RBP9.96□□□□□ -0.81
SS18L1-201ENST00000331758 ATP9BO43861 1147 aa9.96□□□□□ -0.81
SS18L1-201ENST00000331758 CST3P01034 146 aaPredicted RBP9.96□□□□□ -0.81
SS18L1-201ENST00000331758 POMCP01189 267 aa9.96□□□□□ -0.81
SS18L1-201ENST00000331758 MYBL2P10244 700 aa9.96□□□□□ -0.81
SS18L1-201ENST00000331758 ADSSP30520 456 aa9.96□□□□□ -0.81
SS18L1-201ENST00000331758 ICAM3P32942 547 aa9.96□□□□□ -0.81
SS18L1-201ENST00000331758 MAP2K2P36507 400 aa9.96□□□□□ -0.81
SS18L1-201ENST00000331758 NOL9Q5SY16 702 aaKnown RBP9.96□□□□□ -0.81
SS18L1-201ENST00000331758 NXNQ6DKJ4 435 aa9.96□□□□□ -0.81
SS18L1-201ENST00000331758 LRIG3Q6UXM1 1119 aa9.96□□□□□ -0.81
SS18L1-201ENST00000331758 SPOCD1Q6ZMY3 1216 aa9.96□□□□□ -0.81
SS18L1-201ENST00000331758 ZNF410Q86VK4 478 aa9.96□□□□□ -0.81
SS18L1-201ENST00000331758 NLRP14Q86W24 1093 aa9.96□□□□□ -0.81
SS18L1-201ENST00000331758 C4orf33Q8N1A6 199 aa9.96□□□□□ -0.81
SS18L1-201ENST00000331758 CNPY3Q9BT09 278 aa9.96□□□□□ -0.81
SS18L1-201ENST00000331758 ST6GALNAC4Q9H4F1 302 aa9.96□□□□□ -0.81
SS18L1-201ENST00000331758 DDIT4Q9NX09 232 aa9.96□□□□□ -0.81
SS18L1-201ENST00000331758 NWD2Q9ULI1 1742 aa9.96□□□□□ -0.81
SS18L1-201ENST00000331758 DFFAO00273 331 aa9.96□□□□□ -0.81
SS18L1-201ENST00000331758 HMBSP08397 361 aa9.96□□□□□ -0.81
SS18L1-201ENST00000331758 RASSF2P50749 326 aa9.96□□□□□ -0.81
SS18L1-201ENST00000331758 MAP2K5Q13163 448 aa9.96□□□□□ -0.81
SS18L1-201ENST00000331758 ATP13A4Q4VNC1 1196 aa9.96□□□□□ -0.81
SS18L1-201ENST00000331758 RYBPQ8N488 228 aaPredicted RBP9.96□□□□□ -0.81
SS18L1-201ENST00000331758 SHCBP1Q8NEM2 672 aa9.96□□□□□ -0.81
SS18L1-201ENST00000331758 VCPIP1Q96JH7 1222 aa9.96□□□□□ -0.81
SS18L1-201ENST00000331758 ZBED2Q9BTP6 218 aa9.96□□□□□ -0.81
SS18L1-201ENST00000331758 SPON2Q9BUD6 331 aa9.96□□□□□ -0.81
SS18L1-201ENST00000331758 TXNRD2Q9NNW7 524 aa9.96□□□□□ -0.81
SS18L1-201ENST00000331758 ALG13Q9NP73 1137 aaKnown RBP9.96□□□□□ -0.81
SS18L1-201ENST00000331758 AVENQ9NQS1 362 aaPredicted RBP9.96□□□□□ -0.81
SS18L1-201ENST00000331758 ABI2Q9NYB9 513 aaPredicted RBP9.96□□□□□ -0.81
SS18L1-201ENST00000331758 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.96□□□□□ -0.816e-11■■■■■ 29
SS18L1-201ENST00000331758 MROH7Q68CQ1 1323 aa9.96□□□□□ -0.81
SS18L1-201ENST00000331758 SLC15A5A6NIM6 579 aa9.96□□□□□ -0.82
SS18L1-201ENST00000331758 MICAL2O94851 1124 aa9.96□□□□□ -0.82
SS18L1-201ENST00000331758 IRAK1P51617 712 aa9.96□□□□□ -0.82
SS18L1-201ENST00000331758 NFIL3Q16649 462 aa9.96□□□□□ -0.82
SS18L1-201ENST00000331758 DENND1BQ6P3S1 775 aa9.96□□□□□ -0.82
SS18L1-201ENST00000331758 MTHFD1LQ6UB35 978 aa9.96□□□□□ -0.82
SS18L1-201ENST00000331758 C3orf62Q6ZUJ4 267 aa9.96□□□□□ -0.82
SS18L1-201ENST00000331758 DCLK2Q8N568 766 aa9.96□□□□□ -0.82
SS18L1-201ENST00000331758 USP33Q8TEY7 942 aa9.96□□□□□ -0.82
SS18L1-201ENST00000331758 L3MBTL3Q96JM7 780 aaPredicted RBP9.96□□□□□ -0.82
SS18L1-201ENST00000331758 KLF6Q99612 283 aaPredicted RBP9.96□□□□□ -0.82
SS18L1-201ENST00000331758 FSD1LQ9BXM9 530 aa9.96□□□□□ -0.82
SS18L1-201ENST00000331758 SEMA4AQ9H3S1 761 aa9.96□□□□□ -0.82
SS18L1-201ENST00000331758 XPNPEP3Q9NQH7 507 aa9.96□□□□□ -0.82
SS18L1-201ENST00000331758 MYH1P12882 1939 aa9.96□□□□□ -0.82
SS18L1-201ENST00000331758 PPP1R12AO14974 1030 aaPredicted RBP9.95□□□□□ -0.82
SS18L1-201ENST00000331758 ASS1P00966 412 aaKnown RBP9.95□□□□□ -0.82
SS18L1-201ENST00000331758 HOXD13P35453 343 aa9.95□□□□□ -0.82
SS18L1-201ENST00000331758 BCAT1P54687 386 aa9.95□□□□□ -0.82
SS18L1-201ENST00000331758 FSTL1Q12841 308 aa9.95□□□□□ -0.82
SS18L1-201ENST00000331758 MCUQ8NE86 351 aa9.95□□□□□ -0.82
SS18L1-201ENST00000331758 MDM1Q8TC05 714 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms