RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 STARD3NLO95772 234 aa8.78□□□□□ -1
SKA2-201ENST00000330137 NOVP48745 357 aa8.78□□□□□ -1
SKA2-201ENST00000330137 ZNF829Q3KNS6 432 aaPredicted RBP8.78□□□□□ -1
SKA2-201ENST00000330137 RARS2Q5T160 578 aaKnown RBP8.78□□□□□ -1
SKA2-201ENST00000330137 DEPDC1Q5TB30 811 aa8.78□□□□□ -1
SKA2-201ENST00000330137 C12orf60Q5U649 245 aa8.78□□□□□ -1
SKA2-201ENST00000330137 CIAPIN1Q6FI81 312 aa8.78□□□□□ -1
SKA2-201ENST00000330137 NIPAL1Q6NVV3 410 aa8.78□□□□□ -1
SKA2-201ENST00000330137 GJB7Q6PEY0 223 aa8.78□□□□□ -1
SKA2-201ENST00000330137 OLFML1Q6UWY5 402 aa8.78□□□□□ -1
SKA2-201ENST00000330137 DNAJC14Q6Y2X3 702 aaPredicted RBP8.78□□□□□ -1
SKA2-201ENST00000330137 ZNF804AQ7Z570 1209 aa8.78□□□□□ -1
SKA2-201ENST00000330137 NLRX1Q86UT6 975 aa8.78□□□□□ -1
SKA2-201ENST00000330137 KBTBD6Q86V97 674 aa8.78□□□□□ -1
SKA2-201ENST00000330137 ZNF34Q8IZ26 560 aa8.78□□□□□ -1
SKA2-201ENST00000330137 CCDC33Q8N5R6 958 aa8.78□□□□□ -1
SKA2-201ENST00000330137 TTC13Q8NBP0 860 aa8.78□□□□□ -1
SKA2-201ENST00000330137 HAS1Q92839 578 aa8.78□□□□□ -1
SKA2-201ENST00000330137 TRIM11Q96F44 468 aa8.78□□□□□ -1
SKA2-201ENST00000330137 APOPT1Q96IL0 206 aa8.78□□□□□ -1
SKA2-201ENST00000330137 NUP85Q9BW27 656 aa8.78□□□□□ -1
SKA2-201ENST00000330137 ANO3Q9BYT9 981 aa8.78□□□□□ -1
SKA2-201ENST00000330137 CHST7Q9NS84 486 aa8.78□□□□□ -1
SKA2-201ENST00000330137 DMAC2Q9NW81 257 aa8.78□□□□□ -1
SKA2-201ENST00000330137 SEL1LQ9UBV2 794 aa8.78□□□□□ -1
SKA2-201ENST00000330137 TRMT112Q9UI30 125 aaKnown RBP8.78□□□□□ -1
SKA2-201ENST00000330137 ADAMTS6Q9UKP5 1117 aa8.78□□□□□ -1
SKA2-201ENST00000330137 SBF2Q86WG5 1849 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 BAZ2BQ9UIF8 2168 aaKnown RBP8.77□□□□□ -1.01
SKA2-201ENST00000330137 CYP3A7-CYP3A51PA0A087WV96 503 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 IQANK1A0A1B0GTG1 560 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 CCDC160A6NGH7 325 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 POC1B-GALNT4F8VUJ3 575 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 I3L4J1 428 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 TBX3O15119 743 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 EDIL3O43854 480 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 PTPN2P17706 415 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 CYP3A7P24462 503 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 HMOX2P30519 316 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 CLK2P49760 499 aaKnown RBP8.77□□□□□ -1.01
SKA2-201ENST00000330137 WASHC5Q12768 1159 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 FBXL19Q6PCT2 694 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 OGFOD1Q8N543 542 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 SNRNP27Q8WVK2 155 aaKnown RBP8.77□□□□□ -1.01
SKA2-201ENST00000330137 CASP10Q92851 521 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 MRPL1Q9BYD6 325 aaKnown RBP8.77□□□□□ -1.01
SKA2-201ENST00000330137 ACSS3Q9H6R3 686 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 TBC1D7Q9P0N9 293 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 KIAA1024Q9UPX6 916 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 GPC6Q9Y625 555 aaPredicted RBP8.77□□□□□ -1.01
SKA2-201ENST00000330137 ZHX2Q9Y6X8 837 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 PMLP29590 882 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 DYNLL1P63167 89 aaKnown RBP8.77□□□□□ -1.01
SKA2-201ENST00000330137 MYL7Q01449 175 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 TLR1Q15399 786 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 SAMD3Q8N6K7 520 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 PRPF31Q8WWY3 499 aaKnown RBP8.77□□□□□ -1.01
SKA2-201ENST00000330137 EME1Q96AY2 570 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 HSPBAP1Q96EW2 488 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 MBOAT7Q96N66 472 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 CYTH2Q99418 400 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 TMEM47Q9BQJ4 181 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 SEPT11Q9NVA2 429 aaKnown RBP8.77□□□□□ -1.01
SKA2-201ENST00000330137 BIN2Q9UBW5 565 aaPredicted RBP8.77□□□□□ -1.01
SKA2-201ENST00000330137 HERC5Q9UII4 1024 aaKnown RBP8.77□□□□□ -1.01
SKA2-201ENST00000330137 RABGEF1Q9UJ41 708 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 ZNF180Q9UJW8 692 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 B3GNT3Q9Y2A9 372 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 ZNF652Q9Y2D9 606 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 FRMD4BQ9Y2L6 1034 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 COL24A1Q17RW2 1714 aa8.77□□□□□ -1.01
SKA2-201ENST00000330137 NUP98P52948 1817 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 A0A1W2PPM1 405 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 FUOMA2VDF0 154 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 E9PMD0 336 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 SMIM22K7EJ46 135 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 TPD52L2O43399 206 aaKnown RBP8.76□□□□□ -1.01
SKA2-201ENST00000330137 SPAG6O75602 509 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 TDP2O95551 362 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 ENO1P06733 434 aaKnown RBP8.76□□□□□ -1.01
SKA2-201ENST00000330137 PEX2P28328 305 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 TTKP33981 857 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 ALDH1A3P47895 512 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 BCAP31P51572 246 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 CCNIQ14094 377 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 TRIP10Q15642 601 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 CYP4F22Q6NT55 531 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 TICAM1Q8IUC6 712 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 LMO3Q8TAP4 145 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 GIPC3Q8TF64 312 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 NSUN4Q96CB9 384 aaKnown RBP8.76□□□□□ -1.01
SKA2-201ENST00000330137 KCNK16Q96T55 309 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 OLFM1Q99784 485 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 NUF2Q9BZD4 464 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 GPCPD1Q9NPB8 672 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 PICK1Q9NRD5 415 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 GNPTGQ9UJJ9 305 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 DOT1LQ8TEK3 1739 aa8.76□□□□□ -1.01
SKA2-201ENST00000330137 RBBP6Q7Z6E9 1792 aaKnown RBP8.76□□□□□ -1.01
SKA2-201ENST00000330137 RSPH10B2B2RC85 870 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms