RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 EFR3BQ9Y2G0 817 aa11.82□□□□□ -0.52
GINS3-202ENST00000328514 IQANK1A0A1B0GTG1 560 aa11.81□□□□□ -0.52
GINS3-202ENST00000328514 LPXNO60711 386 aa11.81□□□□□ -0.52
GINS3-202ENST00000328514 RNASEH1O60930 286 aaKnown RBP11.81□□□□□ -0.52
GINS3-202ENST00000328514 NPM3O75607 178 aaKnown RBP11.81□□□□□ -0.52
GINS3-202ENST00000328514 POLR2MP0CAP2 368 aa11.81□□□□□ -0.52
GINS3-202ENST00000328514 ZCCHC18P0CG32 403 aa11.81□□□□□ -0.52
GINS3-202ENST00000328514 ARP10275 920 aa11.81□□□□□ -0.52
GINS3-202ENST00000328514 ETS1P14921 441 aa11.81□□□□□ -0.52
GINS3-202ENST00000328514 DSG3P32926 999 aa11.81□□□□□ -0.52
GINS3-202ENST00000328514 NOMO3P69849 1222 aa11.81□□□□□ -0.52
GINS3-202ENST00000328514 ITGA9Q13797 1035 aa11.81□□□□□ -0.52
GINS3-202ENST00000328514 MFSD7Q6UXD7 560 aa11.81□□□□□ -0.52
GINS3-202ENST00000328514 C3orf62Q6ZUJ4 267 aa11.81□□□□□ -0.52
GINS3-202ENST00000328514 PDSS2Q86YH6 399 aa11.81□□□□□ -0.52
GINS3-202ENST00000328514 TRIM42Q8IWZ5 723 aa11.81□□□□□ -0.52
GINS3-202ENST00000328514 LZICQ8WZA0 190 aa11.81□□□□□ -0.52
GINS3-202ENST00000328514 RPGRQ92834 1020 aaKnown RBP11.81□□□□□ -0.52
GINS3-202ENST00000328514 ARHGEF1Q92888 912 aaKnown RBP11.81□□□□□ -0.52
GINS3-202ENST00000328514 CYTH2Q99418 400 aa11.81□□□□□ -0.52
GINS3-202ENST00000328514 SENP7Q9BQF6 1050 aa11.81□□□□□ -0.52
GINS3-202ENST00000328514 WDR83Q9BRX9 315 aaKnown RBP11.81□□□□□ -0.52
GINS3-202ENST00000328514 PARVAQ9NVD7 372 aa11.81□□□□□ -0.52
GINS3-202ENST00000328514 LMCD1Q9NZU5 365 aa11.81□□□□□ -0.52
GINS3-202ENST00000328514 PI4KBQ9UBF8 816 aa11.81□□□□□ -0.52
GINS3-202ENST00000328514 SLC7A8Q9UHI5 535 aa11.81□□□□□ -0.52
GINS3-202ENST00000328514 TAGLN3Q9UI15 199 aa11.81□□□□□ -0.52
GINS3-202ENST00000328514 PRR12Q9ULL5 1215 aa11.81□□□□□ -0.52
GINS3-202ENST00000328514 GMEB1Q9Y692 573 aa11.81□□□□□ -0.52
GINS3-202ENST00000328514 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.81□□□□□ -0.52
GINS3-202ENST00000328514 RGPD3A6NKT7 1758 aaPredicted RBP11.81□□□□□ -0.52
GINS3-202ENST00000328514 RGPD4Q7Z3J3 1758 aa11.81□□□□□ -0.52
GINS3-202ENST00000328514 LRRC37AA6NMS7 1700 aa11.81□□□□□ -0.52
GINS3-202ENST00000328514 hCG_1818297A0A087WSY0 165 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 BTBD19C9JJ37 291 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 GNPATO15228 680 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 TLR3O15455 904 aaKnown RBP11.8□□□□□ -0.52
GINS3-202ENST00000328514 RAD21O60216 631 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 MT-ND3P03897 115 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 SSTR1P30872 391 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 STIP1P31948 543 aaKnown RBP11.8□□□□□ -0.52
GINS3-202ENST00000328514 CLDN10P78369 228 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 CYP24A1Q07973 514 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 NFIAQ12857 509 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 EFTUD2Q15029 972 aaKnown RBP eCLIP11.8□□□□□ -0.52
GINS3-202ENST00000328514 HSF5Q4G112 596 aaPredicted RBP11.8□□□□□ -0.52
GINS3-202ENST00000328514 HP1BP3Q5SSJ5 553 aaPredicted RBP11.8□□□□□ -0.52
GINS3-202ENST00000328514 SPOCD1Q6ZMY3 1216 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 TREML1Q86YW5 311 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 ABRAQ8N0Z2 381 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 FEZF2Q8TBJ5 459 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 RAB3IL1Q8TBN0 382 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 FAM172AQ8WUF8 416 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 NAT14Q8WUY8 206 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 CPT1BQ92523 772 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 CCDC127Q96BQ5 260 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 DDX50Q9BQ39 737 aaKnown RBP11.8□□□□□ -0.52
GINS3-202ENST00000328514 DEFB129Q9H1M3 183 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 C1orf112Q9NSG2 853 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 CHCHD3Q9NX63 227 aaKnown RBP11.8□□□□□ -0.52
GINS3-202ENST00000328514 GOLGA8IPA6NC78 632 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 GOLGA8JA6NMD2 632 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 SPECC1L-ADORA2AF8WAN1 911 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 H3BRJ5 948 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 IMPDH2P12268 514 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 KRT10P13645 584 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 HOXA10P31260 410 aaPredicted RBP11.8□□□□□ -0.52
GINS3-202ENST00000328514 ASPHQ12797 758 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 MSS51Q4VC12 460 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 TFDP3Q5H9I0 405 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 LLGL2Q6P1M3 1020 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 CCDC174Q6PII3 467 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 CAPN12Q6ZSI9 719 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 ANKMY2Q8IV38 441 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 ALDH16A1Q8IZ83 802 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 TMEM161BQ8NDZ6 487 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 SLC44A1Q8WWI5 657 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 IRGQQ8WZA9 623 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 APBB2Q92870 758 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 RBM17Q96I25 401 aaKnown RBP11.8□□□□□ -0.52
GINS3-202ENST00000328514 WWP1Q9H0M0 922 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 ZCWPW1Q9H0M4 648 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.8□□□□□ -0.52
GINS3-202ENST00000328514 CIDEBQ9UHD4 219 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 TBX20Q9UMR3 447 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 CNTN6Q9UQ52 1028 aa11.8□□□□□ -0.52
GINS3-202ENST00000328514 FAM237BA0A1B0GVD1 139 aa11.79□□□□□ -0.52
GINS3-202ENST00000328514 TMEM191CA6NGB0 347 aa11.79□□□□□ -0.52
GINS3-202ENST00000328514 SPAG6O75602 509 aa11.79□□□□□ -0.52
GINS3-202ENST00000328514 TMEM191BP0C7N4 346 aa11.79□□□□□ -0.52
GINS3-202ENST00000328514 ACO1P21399 889 aaKnown RBP11.79□□□□□ -0.52
GINS3-202ENST00000328514 BGNP21810 368 aa11.79□□□□□ -0.52
GINS3-202ENST00000328514 CDKN2BP42772 138 aa11.79□□□□□ -0.52
GINS3-202ENST00000328514 RANBP1P43487 201 aa11.79□□□□□ -0.52
GINS3-202ENST00000328514 KCNQ4P56696 695 aa11.79□□□□□ -0.52
GINS3-202ENST00000328514 SHROOM1Q2M3G4 852 aaPredicted RBP11.79□□□□□ -0.52
GINS3-202ENST00000328514 FNBP1LQ5T0N5 605 aa11.79□□□□□ -0.52
GINS3-202ENST00000328514 NIPA1Q7RTP0 329 aa11.79□□□□□ -0.52
GINS3-202ENST00000328514 ALYREFQ86V81 257 aaKnown RBP11.79□□□□□ -0.52
GINS3-202ENST00000328514 ZFPM1Q8IX07 1006 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms