RNA–Protein interactions for RNA: ENST00000324938.9

LIMS2-201, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS2, Length 2,111 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-201ENST00000324938 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.55■■□□□ 1.2
LIMS2-201ENST00000324938 YBX3P16989 372 aaKnown RBP eCLIP22.54■■□□□ 1.2
LIMS2-201ENST00000324938 ADCYAP1R1P41586 468 aa22.54■■□□□ 1.2
LIMS2-201ENST00000324938 TAZQ16635 292 aa22.54■■□□□ 1.2
LIMS2-201ENST00000324938 SLC10A4Q96EP9 437 aa22.54■■□□□ 1.2
LIMS2-201ENST00000324938 HPDLQ96IR7 371 aa22.54■■□□□ 1.2
LIMS2-201ENST00000324938 PCDH9Q9HC56 1237 aa22.54■■□□□ 1.2
LIMS2-201ENST00000324938 ITGA11Q9UKX5 1188 aa22.54■■□□□ 1.2
LIMS2-201ENST00000324938 C2CD2Q9Y426 696 aa22.54■■□□□ 1.2
LIMS2-201ENST00000324938 TSPAN1O60635 241 aa22.54■■□□□ 1.2
LIMS2-201ENST00000324938 ZSCAN5DPP0CG00 497 aa22.54■■□□□ 1.2
LIMS2-201ENST00000324938 IL1R2P27930 398 aa22.54■■□□□ 1.2
LIMS2-201ENST00000324938 MAGEA4P43358 317 aa22.54■■□□□ 1.2
LIMS2-201ENST00000324938 STAT4Q14765 748 aa22.54■■□□□ 1.2
LIMS2-201ENST00000324938 KIAA0319LQ8IZA0 1049 aa22.54■■□□□ 1.2
LIMS2-201ENST00000324938 HAUS1Q96CS2 278 aa22.54■■□□□ 1.2
LIMS2-201ENST00000324938 MCRS1Q96EZ8 462 aa22.54■■□□□ 1.2
LIMS2-201ENST00000324938 C9orf72Q96LT7 481 aa22.54■■□□□ 1.2
LIMS2-201ENST00000324938 FRMD8P1Q9BZ68 369 aaPredicted RBP22.54■■□□□ 1.2
LIMS2-201ENST00000324938 FAM124BQ9H5Z6 455 aaPredicted RBP22.54■■□□□ 1.2
LIMS2-201ENST00000324938 ZWILCHQ9H900 591 aa22.54■■□□□ 1.2
LIMS2-201ENST00000324938 CTNNAL1Q9UBT7 734 aa22.54■■□□□ 1.2
LIMS2-201ENST00000324938 TPX2Q9ULW0 747 aaKnown RBP22.54■■□□□ 1.2
LIMS2-201ENST00000324938 M0QYV0 167 aa22.53■■□□□ 1.2
LIMS2-201ENST00000324938 NDC80O14777 642 aa22.53■■□□□ 1.2
LIMS2-201ENST00000324938 STAU1O95793 577 aaKnown RBP22.53■■□□□ 1.2
LIMS2-201ENST00000324938 HMGCRP04035 888 aa22.53■■□□□ 1.2
LIMS2-201ENST00000324938 VDRP11473 427 aa22.53■■□□□ 1.2
LIMS2-201ENST00000324938 SLC20A2Q08357 652 aa22.53■■□□□ 1.2
LIMS2-201ENST00000324938 INCA1Q0VD86 236 aa22.53■■□□□ 1.2
LIMS2-201ENST00000324938 GPS1Q13098 491 aa22.53■■□□□ 1.2
LIMS2-201ENST00000324938 MORF4L2Q15014 288 aa22.53■■□□□ 1.2
LIMS2-201ENST00000324938 MICALL1Q8N3F8 863 aa22.53■■□□□ 1.2
LIMS2-201ENST00000324938 NLRP7Q8WX94 980 aa22.53■■□□□ 1.2
LIMS2-201ENST00000324938 CABS1Q96KC9 395 aa22.53■■□□□ 1.2
LIMS2-201ENST00000324938 PRMT1Q99873 361 aaKnown RBP22.53■■□□□ 1.2
LIMS2-201ENST00000324938 SLC45A1Q9Y2W3 748 aa22.53■■□□□ 1.2
LIMS2-201ENST00000324938 H3BRB1 525 aa22.52■■□□□ 1.2
LIMS2-201ENST00000324938 PDHXO00330 501 aa22.52■■□□□ 1.2
LIMS2-201ENST00000324938 ETS1P14921 441 aa22.52■■□□□ 1.2
LIMS2-201ENST00000324938 GPD2P43304 727 aa22.52■■□□□ 1.2
LIMS2-201ENST00000324938 SMTNL2Q2TAL5 461 aa22.52■■□□□ 1.2
LIMS2-201ENST00000324938 BBS12Q6ZW61 710 aa22.52■■□□□ 1.2
LIMS2-201ENST00000324938 NT5DC4Q86YG4 428 aa22.52■■□□□ 1.2
LIMS2-201ENST00000324938 EMC1Q8N766 993 aa22.52■■□□□ 1.2
LIMS2-201ENST00000324938 CCDC77Q9BR77 488 aa22.52■■□□□ 1.2
LIMS2-201ENST00000324938 TUT1Q9H6E5 874 aaKnown RBP22.52■■□□□ 1.2
LIMS2-201ENST00000324938 AGAP1Q9UPQ3 857 aa22.52■■□□□ 1.2
LIMS2-201ENST00000324938 STRNO43815 780 aa22.52■■□□□ 1.2
LIMS2-201ENST00000324938 CDH16O75309 829 aa22.52■■□□□ 1.2
LIMS2-201ENST00000324938 FSBPO95073 299 aa22.52■■□□□ 1.2
LIMS2-201ENST00000324938 KDELR1P24390 212 aa22.52■■□□□ 1.2
LIMS2-201ENST00000324938 ACAP1Q15027 740 aa22.52■■□□□ 1.2
LIMS2-201ENST00000324938 VSTM1Q6UX27 236 aa22.52■■□□□ 1.2
LIMS2-201ENST00000324938 TTC13Q8NBP0 860 aa22.52■■□□□ 1.2
LIMS2-201ENST00000324938 ACAP3Q96P50 834 aa22.52■■□□□ 1.2
LIMS2-201ENST00000324938 EURLQ9NYK6 297 aa22.52■■□□□ 1.2
LIMS2-201ENST00000324938 BARX2Q9UMQ3 279 aaPredicted RBP22.52■■□□□ 1.2
LIMS2-201ENST00000324938 SHOC2Q9UQ13 582 aa22.52■■□□□ 1.2
LIMS2-201ENST00000324938 A0A1B0GUA9 196 aa22.51■■□□□ 1.19
LIMS2-201ENST00000324938 SNAI1O95863 264 aaPredicted RBP22.51■■□□□ 1.19
LIMS2-201ENST00000324938 RNF187Q5TA31 235 aaPredicted RBP22.51■■□□□ 1.19
LIMS2-201ENST00000324938 RNASEH2BQ5TBB1 312 aaKnown RBP22.51■■□□□ 1.19
LIMS2-201ENST00000324938 TTC39CQ8N584 583 aa22.51■■□□□ 1.19
LIMS2-201ENST00000324938 TTC25Q96NG3 672 aa22.51■■□□□ 1.19
LIMS2-201ENST00000324938 ADPGKQ9BRR6 497 aa22.51■■□□□ 1.19
LIMS2-201ENST00000324938 TMEM121Q9BTD3 319 aa22.51■■□□□ 1.19
LIMS2-201ENST00000324938 SAYSD1Q9NPB0 183 aa22.51■■□□□ 1.19
LIMS2-201ENST00000324938 DPP3Q9NY33 737 aa22.51■■□□□ 1.19
LIMS2-201ENST00000324938 SCN1AP35498 2009 aa22.51■■□□□ 1.19
LIMS2-201ENST00000324938 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.51■■□□□ 1.19
LIMS2-201ENST00000324938 TMEM120BA0PK00 339 aa22.51■■□□□ 1.19
LIMS2-201ENST00000324938 CETPP11597 493 aa22.51■■□□□ 1.19
LIMS2-201ENST00000324938 HOXD8P13378 290 aaPredicted RBP22.51■■□□□ 1.19
LIMS2-201ENST00000324938 PECAM1P16284 738 aaPredicted RBP22.51■■□□□ 1.19
LIMS2-201ENST00000324938 RBP5P82980 135 aa22.51■■□□□ 1.19
LIMS2-201ENST00000324938 GRIK4Q16099 956 aa22.51■■□□□ 1.19
LIMS2-201ENST00000324938 CCDC142Q17RM4 750 aa22.51■■□□□ 1.19
LIMS2-201ENST00000324938 KCNT1Q5JUK3 1230 aa22.51■■□□□ 1.19
LIMS2-201ENST00000324938 RIBC1Q8N443 379 aaPredicted RBP22.51■■□□□ 1.19
LIMS2-201ENST00000324938 CFAP57Q96MR6 1250 aa22.51■■□□□ 1.19
LIMS2-201ENST00000324938 MORF4L1Q9UBU8 362 aa22.51■■□□□ 1.19
LIMS2-201ENST00000324938 PDCD11Q14690 1871 aaKnown RBP22.5■■□□□ 1.19
LIMS2-201ENST00000324938 SGK1O00141 431 aa22.5■■□□□ 1.19
LIMS2-201ENST00000324938 OTUD4Q01804 1114 aaKnown RBP22.5■■□□□ 1.19
LIMS2-201ENST00000324938 PLCB3Q01970 1234 aa22.5■■□□□ 1.19
LIMS2-201ENST00000324938 TTC31Q49AM3 519 aaPredicted RBP22.5■■□□□ 1.19
LIMS2-201ENST00000324938 MARCH8Q5T0T0 291 aa22.5■■□□□ 1.19
LIMS2-201ENST00000324938 CCDC121Q6ZUS5 278 aa22.5■■□□□ 1.19
LIMS2-201ENST00000324938 ZNF410Q86VK4 478 aa22.5■■□□□ 1.19
LIMS2-201ENST00000324938 LRRC34Q8IZ02 419 aa22.5■■□□□ 1.19
LIMS2-201ENST00000324938 ACTL9Q8TC94 416 aa22.5■■□□□ 1.19
LIMS2-201ENST00000324938 HEXIM2Q96MH2 286 aaKnown RBP22.5■■□□□ 1.19
LIMS2-201ENST00000324938 UNCXA6NJT0 531 aa22.49■■□□□ 1.19
LIMS2-201ENST00000324938 CST8O60676 142 aa22.49■■□□□ 1.19
LIMS2-201ENST00000324938 CREB1P16220 341 aa22.49■■□□□ 1.19
LIMS2-201ENST00000324938 GRM5P41594 1212 aa22.49■■□□□ 1.19
LIMS2-201ENST00000324938 NDST1P52848 882 aa22.49■■□□□ 1.19
LIMS2-201ENST00000324938 MYO1EQ12965 1108 aa22.49■■□□□ 1.19
LIMS2-201ENST00000324938 MAP1SQ66K74 1059 aaPredicted RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms