RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 CRAMP1Q96RY5 1269 aa21.86■■□□□ 1.09
RNF40-201ENST00000324685 LBHD1Q9BQE6 289 aaPredicted RBP21.86■■□□□ 1.09
RNF40-201ENST00000324685 NOD2Q9HC29 1040 aa21.86■■□□□ 1.09
RNF40-201ENST00000324685 RGS2P41220 211 aa21.86■■□□□ 1.09
RNF40-201ENST00000324685 CACHD1Q5VU97 1274 aa21.86■■□□□ 1.09
RNF40-201ENST00000324685 PLA2G4FQ68DD2 849 aa21.86■■□□□ 1.09
RNF40-201ENST00000324685 TRIM65Q6PJ69 517 aa21.86■■□□□ 1.09
RNF40-201ENST00000324685 TBC1D16Q8TBP0 767 aa21.86■■□□□ 1.09
RNF40-201ENST00000324685 RNF181Q9P0P0 153 aa21.86■■□□□ 1.09
RNF40-201ENST00000324685 AP4S1Q9Y587 144 aa21.86■■□□□ 1.09
RNF40-201ENST00000324685 LAYNQ6UX15 382 aa21.86■■□□□ 1.09
RNF40-201ENST00000324685 DLGAP2Q9P1A6 1054 aa21.86■■□□□ 1.09
RNF40-201ENST00000324685 PHTF1Q9UMS5 762 aa21.86■■□□□ 1.09
RNF40-201ENST00000324685 RPS6KA5O75582 802 aa21.85■■□□□ 1.09
RNF40-201ENST00000324685 RASSF9O75901 435 aa21.85■■□□□ 1.09
RNF40-201ENST00000324685 IRF1P10914 325 aa21.85■■□□□ 1.09
RNF40-201ENST00000324685 MLNP12872 115 aa21.85■■□□□ 1.09
RNF40-201ENST00000324685 PTPN7P35236 360 aa21.85■■□□□ 1.09
RNF40-201ENST00000324685 HARS2P49590 506 aaKnown RBP21.85■■□□□ 1.09
RNF40-201ENST00000324685 SEC24CP53992 1094 aa21.85■■□□□ 1.09
RNF40-201ENST00000324685 ELP3Q9H9T3 547 aa21.85■■□□□ 1.09
RNF40-201ENST00000324685 CNTNAP5Q8WYK1 1306 aa21.85■■□□□ 1.09
RNF40-201ENST00000324685 LOC100653049A0A140TA62 436 aa21.85■■□□□ 1.09
RNF40-201ENST00000324685 KRT34O76011 436 aa21.85■■□□□ 1.09
RNF40-201ENST00000324685 THRAP10827 490 aa21.85■■□□□ 1.09
RNF40-201ENST00000324685 PDHBP11177 359 aa21.85■■□□□ 1.09
RNF40-201ENST00000324685 CORO7P57737 925 aa21.85■■□□□ 1.09
RNF40-201ENST00000324685 ZNF280CQ8ND82 737 aa21.85■■□□□ 1.09
RNF40-201ENST00000324685 PPP1R3GB7ZBB8 358 aa21.85■■□□□ 1.09
RNF40-201ENST00000324685 TTLL9Q3SXZ7 439 aa21.85■■□□□ 1.09
RNF40-201ENST00000324685 TRAF7Q6Q0C0 670 aa21.85■■□□□ 1.09
RNF40-201ENST00000324685 KRCC1Q9NPI7 259 aaPredicted RBP21.85■■□□□ 1.09
RNF40-201ENST00000324685 USE1Q9NZ43 259 aa21.85■■□□□ 1.09
RNF40-201ENST00000324685 E7ENQ6 273 aa21.85■■□□□ 1.09
RNF40-201ENST00000324685 MAP3K13O43283 966 aa21.85■■□□□ 1.09
RNF40-201ENST00000324685 BRD2P25440 801 aaKnown RBP21.85■■□□□ 1.09
RNF40-201ENST00000324685 ARID3BQ8IVW6 561 aaPredicted RBP21.85■■□□□ 1.09
RNF40-201ENST00000324685 TERB1Q8NA31 727 aa21.85■■□□□ 1.09
RNF40-201ENST00000324685 NDUFA13Q9P0J0 144 aa21.85■■□□□ 1.09
RNF40-201ENST00000324685 KCNJ1P48048 391 aa21.84■■□□□ 1.09
RNF40-201ENST00000324685 SERPINB8P50452 374 aa21.84■■□□□ 1.09
RNF40-201ENST00000324685 SGO1Q5FBB7 561 aa21.84■■□□□ 1.09
RNF40-201ENST00000324685 HHIPL2Q6UWX4 724 aa21.84■■□□□ 1.09
RNF40-201ENST00000324685 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.84■■□□□ 1.095e-6■■■■■ 45.5
RNF40-201ENST00000324685 SH3GL2Q99962 352 aa21.84■■□□□ 1.09
RNF40-201ENST00000324685 CINPQ9BW66 212 aaPredicted RBP21.84■■□□□ 1.09
RNF40-201ENST00000324685 TUBGCP4Q9UGJ1 667 aa21.84■■□□□ 1.09
RNF40-201ENST00000324685 PXDNLA1KZ92 1463 aa21.84■■□□□ 1.09
RNF40-201ENST00000324685 NFIBO00712 420 aa21.84■■□□□ 1.09
RNF40-201ENST00000324685 TRIM66O15016 1216 aa21.84■■□□□ 1.09
RNF40-201ENST00000324685 RPS6P62753 249 aaKnown RBP21.84■■□□□ 1.09
RNF40-201ENST00000324685 TRIP4Q15650 581 aaPredicted RBP21.84■■□□□ 1.09
RNF40-201ENST00000324685 PPP2R3CQ969Q6 453 aa21.84■■□□□ 1.09
RNF40-201ENST00000324685 CAAP1Q9H8G2 361 aa21.84■■□□□ 1.09
RNF40-201ENST00000324685 STAU2Q9NUL3 570 aaKnown RBP eCLIP21.84■■□□□ 1.09
RNF40-201ENST00000324685 WWOXQ9NZC7 414 aa21.84■■□□□ 1.09
RNF40-201ENST00000324685 SOX11P35716 441 aa21.84■■□□□ 1.09
RNF40-201ENST00000324685 CPA2P48052 419 aa21.84■■□□□ 1.09
RNF40-201ENST00000324685 LRRC34Q8IZ02 419 aa21.84■■□□□ 1.09
RNF40-201ENST00000324685 CASKIN2Q8WXE0 1202 aa21.84■■□□□ 1.09
RNF40-201ENST00000324685 TUBGCP3Q96CW5 907 aa21.84■■□□□ 1.09
RNF40-201ENST00000324685 HPDLQ96IR7 371 aa21.84■■□□□ 1.09
RNF40-201ENST00000324685 VCPKMTQ9H867 229 aa21.84■■□□□ 1.09
RNF40-201ENST00000324685 C17orf75Q9HAS0 396 aa21.84■■□□□ 1.09
RNF40-201ENST00000324685 TRMT6Q9UJA5 497 aaKnown RBP21.84■■□□□ 1.09
RNF40-201ENST00000324685 SNTNA6NMZ2 147 aa21.84■■□□□ 1.09
RNF40-201ENST00000324685 RNF103O00237 685 aa21.84■■□□□ 1.09
RNF40-201ENST00000324685 HBP1O60381 514 aa21.84■■□□□ 1.09
RNF40-201ENST00000324685 NUP107P57740 925 aa21.84■■□□□ 1.09
RNF40-201ENST00000324685 KRR1Q13601 381 aaKnown RBP21.84■■□□□ 1.09
RNF40-201ENST00000324685 ATP6V0D2Q8N8Y2 350 aa21.84■■□□□ 1.09
RNF40-201ENST00000324685 NOA1Q8NC60 698 aaKnown RBP21.84■■□□□ 1.09
RNF40-201ENST00000324685 PABPC3Q9H361 631 aaKnown RBP21.84■■□□□ 1.09
RNF40-201ENST00000324685 NMRK1Q9NWW6 199 aa21.84■■□□□ 1.09
RNF40-201ENST00000324685 TNS3Q68CZ2 1445 aa21.84■■□□□ 1.09
RNF40-201ENST00000324685 FAM200BP0CF97 657 aa21.83■■□□□ 1.09
RNF40-201ENST00000324685 KHDRBS1Q07666 443 aaKnown RBP eCLIP21.83■■□□□ 1.09
RNF40-201ENST00000324685 SH2D3AQ9BRG2 576 aa21.83■■□□□ 1.09
RNF40-201ENST00000324685 RMND5AQ9H871 391 aa21.83■■□□□ 1.09
RNF40-201ENST00000324685 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.83■■□□□ 1.09
RNF40-201ENST00000324685 CRLS1Q9UJA2 301 aa21.83■■□□□ 1.09
RNF40-201ENST00000324685 ABCA8O94911 1581 aa21.83■■□□□ 1.09
RNF40-201ENST00000324685 SLC25A27O95847 323 aa21.83■■□□□ 1.09
RNF40-201ENST00000324685 NCAM1P13591 858 aa21.83■■□□□ 1.09
RNF40-201ENST00000324685 TARSP26639 723 aaKnown RBP21.83■■□□□ 1.09
RNF40-201ENST00000324685 MZF1P28698 734 aaPredicted RBP21.83■■□□□ 1.09
RNF40-201ENST00000324685 ANXA11P50995 505 aaKnown RBP21.83■■□□□ 1.09
RNF40-201ENST00000324685 MAPK7Q13164 816 aa21.83■■□□□ 1.09
RNF40-201ENST00000324685 GPR141Q7Z602 305 aa21.83■■□□□ 1.09
RNF40-201ENST00000324685 CHSY1Q86X52 802 aa21.83■■□□□ 1.09
RNF40-201ENST00000324685 UNC45BQ8IWX7 931 aa21.83■■□□□ 1.09
RNF40-201ENST00000324685 USP13Q92995 863 aaPredicted RBP21.83■■□□□ 1.09
RNF40-201ENST00000324685 BBS2Q9BXC9 721 aa21.83■■□□□ 1.09
RNF40-201ENST00000324685 TSC22D4Q9Y3Q8 395 aa21.83■■□□□ 1.09
RNF40-201ENST00000324685 RSPH10B2B2RC85 870 aa21.83■■□□□ 1.09
RNF40-201ENST00000324685 PRRG1O14668 218 aa21.83■■□□□ 1.09
RNF40-201ENST00000324685 RSPH10BP0C881 870 aa21.83■■□□□ 1.09
RNF40-201ENST00000324685 DNAJC3Q13217 504 aa21.83■■□□□ 1.09
RNF40-201ENST00000324685 NFIXQ14938 502 aa21.83■■□□□ 1.09
RNF40-201ENST00000324685 CYP4A22Q5TCH4 519 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms