RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.52□□□□□ -0.56
TOP3A-201ENST00000321105 DDIT4Q9NX09 232 aa11.52□□□□□ -0.56
TOP3A-201ENST00000321105 TPX2Q9ULW0 747 aaKnown RBP11.52□□□□□ -0.56
TOP3A-201ENST00000321105 SYNPO2Q9UMS6 1093 aa11.52□□□□□ -0.56
TOP3A-201ENST00000321105 USP18Q9UMW8 372 aa11.52□□□□□ -0.56
TOP3A-201ENST00000321105 SPEF2Q9C093 1822 aa11.52□□□□□ -0.56
TOP3A-201ENST00000321105 BTBD19C9JJ37 291 aa11.52□□□□□ -0.57
TOP3A-201ENST00000321105 KCNA3P22001 575 aa11.52□□□□□ -0.57
TOP3A-201ENST00000321105 SSTR1P30872 391 aa11.52□□□□□ -0.57
TOP3A-201ENST00000321105 NCKAP1LP55160 1127 aa11.52□□□□□ -0.57
TOP3A-201ENST00000321105 ZNF280AP59817 542 aaPredicted RBP11.52□□□□□ -0.57
TOP3A-201ENST00000321105 ZNF200P98182 395 aaPredicted RBP11.52□□□□□ -0.57
TOP3A-201ENST00000321105 DEUP1Q05D60 604 aa11.52□□□□□ -0.57
TOP3A-201ENST00000321105 SPARCL1Q14515 664 aa11.52□□□□□ -0.57
TOP3A-201ENST00000321105 MROH9Q5TGP6 573 aa11.52□□□□□ -0.57
TOP3A-201ENST00000321105 MIB1Q86YT6 1006 aa11.52□□□□□ -0.57
TOP3A-201ENST00000321105 AENQ8WTP8 325 aaKnown RBP11.52□□□□□ -0.57
TOP3A-201ENST00000321105 LPPQ93052 612 aa11.52□□□□□ -0.57
TOP3A-201ENST00000321105 MBOAT7Q96N66 472 aa11.52□□□□□ -0.57
TOP3A-201ENST00000321105 PGLYRP2Q96PD5 576 aa11.52□□□□□ -0.57
TOP3A-201ENST00000321105 TINF2Q9BSI4 451 aa11.52□□□□□ -0.57
TOP3A-201ENST00000321105 B3GNT5Q9BYG0 378 aa11.52□□□□□ -0.57
TOP3A-201ENST00000321105 DDX56Q9NY93 547 aaKnown RBP11.52□□□□□ -0.57
TOP3A-201ENST00000321105 PPP2R3BQ9Y5P8 575 aa11.52□□□□□ -0.57
TOP3A-201ENST00000321105 NUP188Q5SRE5 1749 aa11.52□□□□□ -0.57
TOP3A-201ENST00000321105 TTLL13PA6NNM8 815 aa11.52□□□□□ -0.57
TOP3A-201ENST00000321105 CYB561D2O14569 222 aa11.52□□□□□ -0.57
TOP3A-201ENST00000321105 MAP2K7O14733 419 aa11.52□□□□□ -0.57
TOP3A-201ENST00000321105 PCK1P35558 622 aa11.52□□□□□ -0.57
TOP3A-201ENST00000321105 TSPY1Q01534 308 aa11.52□□□□□ -0.57
TOP3A-201ENST00000321105 MMRN1Q13201 1228 aa11.52□□□□□ -0.57
TOP3A-201ENST00000321105 ZNF484Q5JVG2 852 aa11.52□□□□□ -0.57
TOP3A-201ENST00000321105 SLC9A9Q8IVB4 645 aa11.52□□□□□ -0.57
TOP3A-201ENST00000321105 KIF2BQ8N4N8 673 aa11.52□□□□□ -0.57
TOP3A-201ENST00000321105 ATP11CQ8NB49 1132 aa11.52□□□□□ -0.57
TOP3A-201ENST00000321105 ZFYVE28Q9HCC9 887 aa11.52□□□□□ -0.57
TOP3A-201ENST00000321105 ZC3H7BQ9UGR2 993 aaKnown RBP11.52□□□□□ -0.57
TOP3A-201ENST00000321105 KCNK1O00180 336 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 SYF2O95926 243 aaKnown RBP11.51□□□□□ -0.57
TOP3A-201ENST00000321105 RABGGTBP53611 331 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 PCSK7Q16549 785 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 TFDP3Q5H9I0 405 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 ZNF677Q86XU0 584 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 CFAP61Q8NHU2 1237 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 SLC2A14Q8TDB8 520 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 SKA2Q8WVK7 121 aaPredicted RBP11.51□□□□□ -0.57
TOP3A-201ENST00000321105 NDRG1Q92597 394 aaKnown RBP11.51□□□□□ -0.57
TOP3A-201ENST00000321105 C18orf25Q96B23 403 aaPredicted RBP11.51□□□□□ -0.57
TOP3A-201ENST00000321105 GPR20Q99678 358 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 ACO2Q99798 780 aaKnown RBP11.51□□□□□ -0.57
TOP3A-201ENST00000321105 RBPJLQ9UBG7 517 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 AKAP11Q9UKA4 1901 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 MAP1BP46821 2468 aaKnown RBP11.51□□□□□ -0.57
TOP3A-201ENST00000321105 A0A0A6YYK5 440 aaPredicted RBP11.51□□□□□ -0.57
TOP3A-201ENST00000321105 C17orf102A2RUQ5 167 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 O00370 1275 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 CDH16O75309 829 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 MAFO75444 373 aaPredicted RBP11.51□□□□□ -0.57
TOP3A-201ENST00000321105 AP1G2O75843 785 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 KRT37O76014 449 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 GSTA1P08263 222 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 GSTA2P09210 222 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 NCF2P19878 526 aaPredicted RBP11.51□□□□□ -0.57
TOP3A-201ENST00000321105 EPHB2P29323 1055 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 TAF6P49848 677 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 MARSP56192 900 aaKnown RBP11.51□□□□□ -0.57
TOP3A-201ENST00000321105 MAMLD1Q13495 774 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 COBLL1Q53SF7 1204 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 NPNTQ6UXI9 565 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 ZPBP2Q6X784 338 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 SPOCD1Q6ZMY3 1216 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 TMC3Q7Z5M5 1100 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 HELQQ8TDG4 1101 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 RAPGEF5Q92565 580 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 FAM136AQ96C01 138 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 PABPC5Q96DU9 382 aaKnown RBP11.51□□□□□ -0.57
TOP3A-201ENST00000321105 IFT122Q9HBG6 1241 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 R3HDM2Q9Y2K5 976 aaKnown RBP11.51□□□□□ -0.57
TOP3A-201ENST00000321105 A0A0B4J269 797 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 GPR25O00155 361 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 MICAL2O94851 1124 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 MIPP30301 263 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 TPI1P60174 286 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 POU5F1BQ06416 359 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 ZNF844Q08AG5 666 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 FBXO47Q5MNV8 452 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 BTBD8Q5XKL5 378 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 OR6P1Q8NGX9 317 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 XPO6Q96QU8 1125 aaKnown RBP11.51□□□□□ -0.57
TOP3A-201ENST00000321105 UNKQ9C0B0 810 aaKnown RBP11.51□□□□□ -0.57
TOP3A-201ENST00000321105 NXF3Q9H4D5 531 aaKnown RBP11.51□□□□□ -0.57
TOP3A-201ENST00000321105 GPBP1L1Q9HC44 474 aaPredicted RBP11.51□□□□□ -0.57
TOP3A-201ENST00000321105 ABCF3Q9NUQ8 709 aa11.51□□□□□ -0.57
TOP3A-201ENST00000321105 PABPN1LA6NDY0 278 aaKnown RBP11.5□□□□□ -0.57
TOP3A-201ENST00000321105 FZD9O00144 591 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 LPXNO60711 386 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 ATXN8OSP0DMR3 200 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 TTMPQ5BVD1 217 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 GPR142Q7Z601 462 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 SMC1BQ8NDV3 1235 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms