RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 SERINC5Q86VE9 423 aa14.99□□□□□ -0.01
VRK3-201ENST00000316763 CENPTQ96BT3 561 aa14.99□□□□□ -0.01
VRK3-201ENST00000316763 DDX27Q96GQ7 796 aaKnown RBP14.99□□□□□ -0.01
VRK3-201ENST00000316763 C11orf70Q9BRQ4 267 aa14.99□□□□□ -0.01
VRK3-201ENST00000316763 SEMA4AQ9H3S1 761 aa14.99□□□□□ -0.01
VRK3-201ENST00000316763 ANKRD65E5RJM6 399 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 RIPK2O43353 540 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 ATN1P54259 1190 aaPredicted RBP14.98□□□□□ -0.01
VRK3-201ENST00000316763 PTPN11Q06124 597 aaPredicted RBP14.98□□□□□ -0.01
VRK3-201ENST00000316763 SNX1Q13596 522 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 PTK6Q13882 451 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 KYAT1Q16773 422 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 PLEKHA7Q6IQ23 1121 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 SLC39A5Q6ZMH5 540 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 PHLDB2Q86SQ0 1253 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 TADA2BQ86TJ2 420 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 WDR49Q8IV35 697 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 CCDC50Q8IVM0 306 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 THNSL1Q8IYQ7 743 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 CEP120Q8N960 986 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 ATL2Q8NHH9 583 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 TMEM40Q8WWA1 233 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 SNF8Q96H20 258 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 ROPN1BQ9BZX4 212 aaPredicted RBP14.98□□□□□ -0.01
VRK3-201ENST00000316763 DCLK3Q9C098 648 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 ROPN1Q9HAT0 212 aaPredicted RBP14.98□□□□□ -0.01
VRK3-201ENST00000316763 PARVAQ9NVD7 372 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 GINS2Q9Y248 185 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 NUB1Q9Y5A7 615 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 B4GALT4O60513 344 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 RPLP2P05387 115 aaKnown RBP14.98□□□□□ -0.01
VRK3-201ENST00000316763 FGFR4P22455 802 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 SLC20A2Q08357 652 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 MAMLD1Q13495 774 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 SMYD5Q6GMV2 418 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 YTHDF3Q7Z739 585 aaKnown RBP14.98□□□□□ -0.01
VRK3-201ENST00000316763 CCDC25Q86WR0 208 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 PASD1Q8IV76 773 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 KATNAL2Q8IYT4 538 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 OTUD6BQ8N6M0 293 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 BBOF1Q8ND07 529 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 OR5B17Q8NGF7 314 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 TRIM7Q9C029 511 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 C11orf49Q9H6J7 331 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 TRMT13Q9NUP7 481 aaKnown RBP14.98□□□□□ -0.01
VRK3-201ENST00000316763 IP6K2Q9UHH9 426 aa14.98□□□□□ -0.01
VRK3-201ENST00000316763 RASGRF2O14827 1237 aa14.97□□□□□ -0.01
VRK3-201ENST00000316763 MEFVO15553 781 aaPredicted RBP14.97□□□□□ -0.01
VRK3-201ENST00000316763 CALB1P05937 261 aa14.97□□□□□ -0.01
VRK3-201ENST00000316763 CATSPER4Q7RTX7 472 aa14.97□□□□□ -0.01
VRK3-201ENST00000316763 NECAB2Q7Z6G3 386 aa14.97□□□□□ -0.01
VRK3-201ENST00000316763 TMEM192Q8IY95 271 aa14.97□□□□□ -0.01
VRK3-201ENST00000316763 FEZF2Q8TBJ5 459 aa14.97□□□□□ -0.01
VRK3-201ENST00000316763 RAPGEF5Q92565 580 aa14.97□□□□□ -0.01
VRK3-201ENST00000316763 UMODL1Q5DID0 1318 aa14.96□□□□□ -0.01
VRK3-201ENST00000316763 DCDC2CA8MYV0 355 aa14.96□□□□□ -0.01
VRK3-201ENST00000316763 TLR3O15455 904 aaKnown RBP14.96□□□□□ -0.01
VRK3-201ENST00000316763 IL18RAPO95256 599 aa14.96□□□□□ -0.01
VRK3-201ENST00000316763 STAG3L1P0CL83 205 aa14.96□□□□□ -0.01
VRK3-201ENST00000316763 ATF2P15336 505 aa14.96□□□□□ -0.01
VRK3-201ENST00000316763 AXLP30530 894 aa14.96□□□□□ -0.01
VRK3-201ENST00000316763 SSR1P43307 286 aaKnown RBP14.96□□□□□ -0.01
VRK3-201ENST00000316763 MRPS6P82932 125 aaKnown RBP14.96□□□□□ -0.01
VRK3-201ENST00000316763 CCNG2Q16589 344 aa14.96□□□□□ -0.01
VRK3-201ENST00000316763 DCAF4L1Q3SXM0 396 aa14.96□□□□□ -0.01
VRK3-201ENST00000316763 MMS22LQ6ZRQ5 1243 aa14.96□□□□□ -0.01
VRK3-201ENST00000316763 TAOK1Q7L7X3 1001 aa14.96□□□□□ -0.01
VRK3-201ENST00000316763 EXD1Q8NHP7 514 aa14.96□□□□□ -0.01
VRK3-201ENST00000316763 ZNF606Q8WXB4 792 aa14.96□□□□□ -0.01
VRK3-201ENST00000316763 WNT8BQ93098 351 aa14.96□□□□□ -0.01
VRK3-201ENST00000316763 CCDC114Q96M63 670 aa14.96□□□□□ -0.01
VRK3-201ENST00000316763 ADPGKQ9BRR6 497 aa14.96□□□□□ -0.01
VRK3-201ENST00000316763 SEZ6LQ9BYH1 1024 aa14.96□□□□□ -0.01
VRK3-201ENST00000316763 TRPV6Q9H1D0 765 aa14.96□□□□□ -0.01
VRK3-201ENST00000316763 RPF1Q9H9Y2 349 aaKnown RBP14.96□□□□□ -0.01
VRK3-201ENST00000316763 CHST7Q9NS84 486 aa14.96□□□□□ -0.01
VRK3-201ENST00000316763 LSM8O95777 96 aaKnown RBP14.96□□□□□ -0.02
VRK3-201ENST00000316763 ASS1P00966 412 aaKnown RBP14.96□□□□□ -0.02
VRK3-201ENST00000316763 RALAP11233 206 aa14.96□□□□□ -0.02
VRK3-201ENST00000316763 ZNF132P52740 706 aa14.96□□□□□ -0.02
VRK3-201ENST00000316763 OSTNP61366 133 aa14.96□□□□□ -0.02
VRK3-201ENST00000316763 LMNB2Q03252 620 aa14.96□□□□□ -0.02
VRK3-201ENST00000316763 LLGL1Q15334 1064 aa14.96□□□□□ -0.02
VRK3-201ENST00000316763 DUOXA2Q1HG44 320 aa14.96□□□□□ -0.02
VRK3-201ENST00000316763 SGSM1Q2NKQ1 1148 aa14.96□□□□□ -0.02
VRK3-201ENST00000316763 TTC31Q49AM3 519 aaPredicted RBP14.96□□□□□ -0.02
VRK3-201ENST00000316763 C2CD6Q53TS8 623 aa14.96□□□□□ -0.02
VRK3-201ENST00000316763 NOTUMQ6P988 496 aa14.96□□□□□ -0.02
VRK3-201ENST00000316763 UBE2Q1Q7Z7E8 422 aa14.96□□□□□ -0.02
VRK3-201ENST00000316763 RSPH3Q86UC2 560 aa14.96□□□□□ -0.02
VRK3-201ENST00000316763 MICALL1Q8N3F8 863 aa14.96□□□□□ -0.02
VRK3-201ENST00000316763 SELENOSQ9BQE4 189 aa14.96□□□□□ -0.02
VRK3-201ENST00000316763 TRAIPQ9BWF2 469 aa14.96□□□□□ -0.02
VRK3-201ENST00000316763 OSBPL8Q9BZF1 889 aa14.96□□□□□ -0.02
VRK3-201ENST00000316763 ANAPC5Q9UJX4 755 aa14.96□□□□□ -0.02
VRK3-201ENST00000316763 SMIM23A6NLE4 172 aa14.95□□□□□ -0.02
VRK3-201ENST00000316763 CPP00450 1065 aa14.95□□□□□ -0.02
VRK3-201ENST00000316763 CXCL8P10145 99 aa14.95□□□□□ -0.02
VRK3-201ENST00000316763 ATP5DP30049 168 aa14.95□□□□□ -0.02
VRK3-201ENST00000316763 ADCY8P40145 1251 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms