RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 OVOS1Q6IE37 1185 aa14.32□□□□□ -0.12
DDX54-202ENST00000314045 FAM71AQ8IYT1 594 aa14.32□□□□□ -0.12
DDX54-202ENST00000314045 GDAP1Q8TB36 358 aa14.32□□□□□ -0.12
DDX54-202ENST00000314045 SKA2Q8WVK7 121 aaPredicted RBP14.32□□□□□ -0.12
DDX54-202ENST00000314045 ATG4AQ8WYN0 398 aa14.32□□□□□ -0.12
DDX54-202ENST00000314045 WRAP73Q9P2S5 460 aaPredicted RBP14.32□□□□□ -0.12
DDX54-202ENST00000314045 DSEQ9UL01 958 aa14.32□□□□□ -0.12
DDX54-202ENST00000314045 CALCAP01258 141 aa14.32□□□□□ -0.12
DDX54-202ENST00000314045 SETSIPP0DME0 302 aa14.32□□□□□ -0.12
DDX54-202ENST00000314045 HNRNPH3P31942 346 aaKnown RBP14.32□□□□□ -0.12
DDX54-202ENST00000314045 NOVP48745 357 aa14.32□□□□□ -0.12
DDX54-202ENST00000314045 IRX4P78413 519 aa14.32□□□□□ -0.12
DDX54-202ENST00000314045 CENPCQ03188 943 aa14.32□□□□□ -0.12
DDX54-202ENST00000314045 BST2Q10589 180 aaKnown RBP14.32□□□□□ -0.12
DDX54-202ENST00000314045 PDCLQ13371 301 aa14.32□□□□□ -0.12
DDX54-202ENST00000314045 NFE2Q16621 373 aaPredicted RBP14.32□□□□□ -0.12
DDX54-202ENST00000314045 CTXN3Q4LDR2 81 aa14.32□□□□□ -0.12
DDX54-202ENST00000314045 FAM172AQ8WUF8 416 aa14.32□□□□□ -0.12
DDX54-202ENST00000314045 KRT82Q9NSB4 513 aa14.32□□□□□ -0.12
DDX54-202ENST00000314045 KANSL3Q9P2N6 904 aa14.32□□□□□ -0.12
DDX54-202ENST00000314045 DMGDHQ9UI17 866 aaKnown RBP14.32□□□□□ -0.12
DDX54-202ENST00000314045 ZC3H4Q9UPT8 1303 aaKnown RBP14.32□□□□□ -0.12
DDX54-202ENST00000314045 MYH3P11055 1940 aa14.32□□□□□ -0.12
DDX54-202ENST00000314045 DHX15O43143 795 aaKnown RBP14.32□□□□□ -0.12
DDX54-202ENST00000314045 MAP3K7CLP57077 242 aa14.32□□□□□ -0.12
DDX54-202ENST00000314045 MRPS6P82932 125 aaKnown RBP14.32□□□□□ -0.12
DDX54-202ENST00000314045 NBPF20Q3BBV1 942 aa14.32□□□□□ -0.12
DDX54-202ENST00000314045 SDCCAG8Q86SQ7 713 aaPredicted RBP14.32□□□□□ -0.12
DDX54-202ENST00000314045 TRIM42Q8IWZ5 723 aa14.32□□□□□ -0.12
DDX54-202ENST00000314045 VPS39Q96JC1 886 aa14.32□□□□□ -0.12
DDX54-202ENST00000314045 TTC1Q99614 292 aa14.32□□□□□ -0.12
DDX54-202ENST00000314045 DPYSL4O14531 572 aa14.32□□□□□ -0.12
DDX54-202ENST00000314045 OPLAHO14841 1288 aa14.32□□□□□ -0.12
DDX54-202ENST00000314045 EPHB2P29323 1055 aa14.32□□□□□ -0.12
DDX54-202ENST00000314045 ARL2P36404 184 aa14.32□□□□□ -0.12
DDX54-202ENST00000314045 RNF219Q5W0B1 726 aaPredicted RBP14.32□□□□□ -0.12
DDX54-202ENST00000314045 C11orf63Q6NUN7 778 aa14.32□□□□□ -0.12
DDX54-202ENST00000314045 ANKMY2Q8IV38 441 aa14.32□□□□□ -0.12
DDX54-202ENST00000314045 ARHGEF2Q92974 986 aaKnown RBP14.32□□□□□ -0.12
DDX54-202ENST00000314045 IFT43Q96FT9 208 aa14.32□□□□□ -0.12
DDX54-202ENST00000314045 CAPNS2Q96L46 248 aa14.32□□□□□ -0.12
DDX54-202ENST00000314045 TRPC7Q9HCX4 862 aa14.32□□□□□ -0.12
DDX54-202ENST00000314045 FNTAP49354 379 aa14.31□□□□□ -0.12
DDX54-202ENST00000314045 MAPK7Q13164 816 aa14.31□□□□□ -0.12
DDX54-202ENST00000314045 FAM131BQ86XD5 332 aa14.31□□□□□ -0.12
DDX54-202ENST00000314045 SMYD3Q9H7B4 428 aa14.31□□□□□ -0.12
DDX54-202ENST00000314045 MYH13Q9UKX3 1938 aa14.31□□□□□ -0.12
DDX54-202ENST00000314045 UBR2Q8IWV8 1755 aa14.31□□□□□ -0.12
DDX54-202ENST00000314045 A0A0U1RQJ8 604 aa14.31□□□□□ -0.12
DDX54-202ENST00000314045 FRMD3A2A2Y4 597 aa14.31□□□□□ -0.12
DDX54-202ENST00000314045 ALDH1A3P47895 512 aa14.31□□□□□ -0.12
DDX54-202ENST00000314045 ZNF235Q14590 738 aa14.31□□□□□ -0.12
DDX54-202ENST00000314045 PCBP1Q15365 356 aaKnown RBP eCLIP14.31□□□□□ -0.12
DDX54-202ENST00000314045 C10orf120Q5SQS8 335 aa14.31□□□□□ -0.12
DDX54-202ENST00000314045 CCDC197Q8NCU1 140 aa14.31□□□□□ -0.12
DDX54-202ENST00000314045 ACTRT1Q8TDG2 376 aa14.31□□□□□ -0.12
DDX54-202ENST00000314045 ISCUQ9H1K1 167 aa14.31□□□□□ -0.12
DDX54-202ENST00000314045 GPATCH2LQ9NWQ4 482 aa14.31□□□□□ -0.12
DDX54-202ENST00000314045 TAS2R14Q9NYV8 317 aa14.31□□□□□ -0.12
DDX54-202ENST00000314045 TPX2Q9ULW0 747 aaKnown RBP14.31□□□□□ -0.12
DDX54-202ENST00000314045 NEU2Q9Y3R4 380 aa14.31□□□□□ -0.12
DDX54-202ENST00000314045 FKTNO75072 461 aa14.31□□□□□ -0.12
DDX54-202ENST00000314045 SMPD1P17405 629 aa14.31□□□□□ -0.12
DDX54-202ENST00000314045 PAMP19021 973 aa14.31□□□□□ -0.12
DDX54-202ENST00000314045 CRYBB1P53674 252 aaPredicted RBP14.31□□□□□ -0.12
DDX54-202ENST00000314045 ZNF268Q14587 947 aaPredicted RBP14.31□□□□□ -0.12
DDX54-202ENST00000314045 SNX17Q15036 470 aa14.31□□□□□ -0.12
DDX54-202ENST00000314045 PDK1Q15118 436 aa14.31□□□□□ -0.12
DDX54-202ENST00000314045 NXNQ6DKJ4 435 aa14.31□□□□□ -0.12
DDX54-202ENST00000314045 IRF2BP2Q7Z5L9 587 aa14.31□□□□□ -0.12
DDX54-202ENST00000314045 MSL3Q8N5Y2 521 aaKnown RBP14.31□□□□□ -0.12
DDX54-202ENST00000314045 ZBTB10Q96DT7 871 aa14.31□□□□□ -0.12
DDX54-202ENST00000314045 TSPYL2Q9H2G4 693 aaPredicted RBP14.31□□□□□ -0.12
DDX54-202ENST00000314045 WDCPQ9H6R7 721 aa14.31□□□□□ -0.12
DDX54-202ENST00000314045 BCAS3Q9H6U6 928 aa14.31□□□□□ -0.12
DDX54-202ENST00000314045 TLR2O60603 784 aa14.3□□□□□ -0.12
DDX54-202ENST00000314045 MAP3K6O95382 1288 aa14.3□□□□□ -0.12
DDX54-202ENST00000314045 BRAFP15056 766 aa14.3□□□□□ -0.12
DDX54-202ENST00000314045 SCNN1GP51170 649 aa14.3□□□□□ -0.12
DDX54-202ENST00000314045 YWHAHQ04917 246 aaPredicted RBP14.3□□□□□ -0.12
DDX54-202ENST00000314045 NR1H3Q13133 447 aa14.3□□□□□ -0.12
DDX54-202ENST00000314045 MTM1Q13496 603 aa14.3□□□□□ -0.12
DDX54-202ENST00000314045 RPS6KA2Q15349 733 aa14.3□□□□□ -0.12
DDX54-202ENST00000314045 SMAD1Q15797 465 aaKnown RBP14.3□□□□□ -0.12
DDX54-202ENST00000314045 EPM2AIP1Q7L775 607 aaPredicted RBP14.3□□□□□ -0.12
DDX54-202ENST00000314045 MCUQ8NE86 351 aa14.3□□□□□ -0.12
DDX54-202ENST00000314045 SENP8Q96LD8 212 aa14.3□□□□□ -0.12
DDX54-202ENST00000314045 AVENQ9NQS1 362 aaPredicted RBP14.3□□□□□ -0.12
DDX54-202ENST00000314045 RPTORQ8N122 1335 aa14.3□□□□□ -0.12
DDX54-202ENST00000314045 ATP9BO43861 1147 aa14.3□□□□□ -0.12
DDX54-202ENST00000314045 TKTL1P51854 596 aa14.3□□□□□ -0.12
DDX54-202ENST00000314045 NFIL3Q16649 462 aa14.3□□□□□ -0.12
DDX54-202ENST00000314045 TFDP3Q5H9I0 405 aa14.3□□□□□ -0.12
DDX54-202ENST00000314045 EXD1Q8NHP7 514 aa14.3□□□□□ -0.12
DDX54-202ENST00000314045 USP33Q8TEY7 942 aa14.3□□□□□ -0.12
DDX54-202ENST00000314045 PNKPQ96T60 521 aa14.3□□□□□ -0.12
DDX54-202ENST00000314045 PAK5Q9P286 719 aa14.3□□□□□ -0.12
DDX54-202ENST00000314045 ST3GAL5Q9UNP4 418 aa14.3□□□□□ -0.12
DDX54-202ENST00000314045 C2CD2Q9Y426 696 aa14.3□□□□□ -0.12
DDX54-202ENST00000314045 COPEO14579 308 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms