RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 KXD1Q9BQD3 176 aa12.85□□□□□ -0.35
SCFD1-201ENST00000311943 BCO2Q9BYV7 579 aa12.85□□□□□ -0.35
SCFD1-201ENST00000311943 ACP6Q9NPH0 428 aa12.85□□□□□ -0.35
SCFD1-201ENST00000311943 PCDHB5Q9Y5E4 795 aa12.85□□□□□ -0.35
SCFD1-201ENST00000311943 NUMBLQ9Y6R0 609 aa12.85□□□□□ -0.35
SCFD1-201ENST00000311943 F8VP50 259 aa12.84□□□□□ -0.35
SCFD1-201ENST00000311943 RNF225M0QZC1 329 aaPredicted RBP12.84□□□□□ -0.35
SCFD1-201ENST00000311943 XYLBO75191 536 aa12.84□□□□□ -0.35
SCFD1-201ENST00000311943 TECTAO75443 2155 aa12.84□□□□□ -0.35
SCFD1-201ENST00000311943 FRMD5Q7Z6J6 570 aa12.84□□□□□ -0.35
SCFD1-201ENST00000311943 SPATA2LQ8IUW3 424 aaPredicted RBP12.84□□□□□ -0.35
SCFD1-201ENST00000311943 FUKQ8N0W3 1084 aa12.84□□□□□ -0.35
SCFD1-201ENST00000311943 MLKLQ8NB16 471 aa12.84□□□□□ -0.35
SCFD1-201ENST00000311943 B3GALNT2Q8NCR0 500 aa12.84□□□□□ -0.35
SCFD1-201ENST00000311943 RIN3Q8TB24 985 aa12.84□□□□□ -0.35
SCFD1-201ENST00000311943 LRRC3BQ96PB8 259 aa12.84□□□□□ -0.35
SCFD1-201ENST00000311943 CDH9Q9ULB4 789 aa12.84□□□□□ -0.35
SCFD1-201ENST00000311943 BICDL2A1A5D9 508 aa12.84□□□□□ -0.35
SCFD1-201ENST00000311943 GOLGA6L22H0YM25 854 aa12.84□□□□□ -0.35
SCFD1-201ENST00000311943 TADA3O75528 432 aa12.84□□□□□ -0.35
SCFD1-201ENST00000311943 SLC9A1P19634 815 aa12.84□□□□□ -0.35
SCFD1-201ENST00000311943 GABRR2P28476 465 aa12.84□□□□□ -0.35
SCFD1-201ENST00000311943 ADORA2BP29275 332 aa12.84□□□□□ -0.35
SCFD1-201ENST00000311943 ALDH1A3P47895 512 aa12.84□□□□□ -0.35
SCFD1-201ENST00000311943 AP3M2P53677 418 aa12.84□□□□□ -0.35
SCFD1-201ENST00000311943 TANGO2Q6ICL3 276 aa12.84□□□□□ -0.35
SCFD1-201ENST00000311943 DCP1BQ8IZD4 617 aaKnown RBP12.84□□□□□ -0.35
SCFD1-201ENST00000311943 ZMIZ2Q8NF64 920 aa12.84□□□□□ -0.35
SCFD1-201ENST00000311943 MYCBPAPQ8TBZ2 947 aa12.84□□□□□ -0.35
SCFD1-201ENST00000311943 PSMG2Q969U7 264 aa12.84□□□□□ -0.35
SCFD1-201ENST00000311943 SLC22A12Q96S37 553 aa12.84□□□□□ -0.35
SCFD1-201ENST00000311943 DPP7Q9UHL4 492 aa12.84□□□□□ -0.35
SCFD1-201ENST00000311943 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.84□□□□□ -0.35
SCFD1-201ENST00000311943 PTPRDP23468 1912 aa12.83□□□□□ -0.36
SCFD1-201ENST00000311943 PNMA6AP0CW24 399 aaPredicted RBP12.83□□□□□ -0.36
SCFD1-201ENST00000311943 EPHB3P54753 998 aa12.83□□□□□ -0.36
SCFD1-201ENST00000311943 FAM78AQ5JUQ0 283 aa12.83□□□□□ -0.36
SCFD1-201ENST00000311943 PHLDB3Q6NSJ2 640 aa12.83□□□□□ -0.36
SCFD1-201ENST00000311943 PDZD4Q76G19 769 aaPredicted RBP12.83□□□□□ -0.36
SCFD1-201ENST00000311943 GPRIN1Q7Z2K8 1008 aa12.83□□□□□ -0.36
SCFD1-201ENST00000311943 SCAMP5Q8TAC9 235 aa12.83□□□□□ -0.36
SCFD1-201ENST00000311943 SPPL2BQ8TCT7 592 aa12.83□□□□□ -0.36
SCFD1-201ENST00000311943 SLC2A14Q8TDB8 520 aa12.83□□□□□ -0.36
SCFD1-201ENST00000311943 CYP2S1Q96SQ9 504 aa12.83□□□□□ -0.36
SCFD1-201ENST00000311943 ZSWIM1Q9BR11 485 aa12.83□□□□□ -0.36
SCFD1-201ENST00000311943 NIF3L1Q9GZT8 377 aa12.83□□□□□ -0.36
SCFD1-201ENST00000311943 CDH7Q9ULB5 785 aa12.83□□□□□ -0.36
SCFD1-201ENST00000311943 COQ4Q9Y3A0 265 aa12.83□□□□□ -0.36
SCFD1-201ENST00000311943 SCAMP3O14828 347 aaKnown RBP12.83□□□□□ -0.36
SCFD1-201ENST00000311943 C1RP00736 705 aa12.83□□□□□ -0.36
SCFD1-201ENST00000311943 FCARP24071 287 aa12.83□□□□□ -0.36
SCFD1-201ENST00000311943 PCSK1P29120 753 aa12.83□□□□□ -0.36
SCFD1-201ENST00000311943 GRIK1P39086 918 aa12.83□□□□□ -0.36
SCFD1-201ENST00000311943 GRM2Q14416 872 aa12.83□□□□□ -0.36
SCFD1-201ENST00000311943 MIIPQ5JXC2 388 aa12.83□□□□□ -0.36
SCFD1-201ENST00000311943 OTOP3Q7RTS5 596 aa12.83□□□□□ -0.36
SCFD1-201ENST00000311943 SLC44A3Q8N4M1 653 aa12.83□□□□□ -0.36
SCFD1-201ENST00000311943 TTC16Q8NEE8 873 aa12.83□□□□□ -0.36
SCFD1-201ENST00000311943 HSD3B7Q9H2F3 369 aa12.83□□□□□ -0.36
SCFD1-201ENST00000311943 ATXN3LQ9H3M9 355 aa12.83□□□□□ -0.36
SCFD1-201ENST00000311943 CISHQ9NSE2 258 aa12.83□□□□□ -0.36
SCFD1-201ENST00000311943 FANCLQ9NW38 375 aa12.83□□□□□ -0.36
SCFD1-201ENST00000311943 MAGEC2Q9UBF1 373 aaPredicted RBP12.83□□□□□ -0.36
SCFD1-201ENST00000311943 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.83□□□□□ -0.36
SCFD1-201ENST00000311943 MYO15AQ9UKN7 3530 aa12.82□□□□□ -0.36
SCFD1-201ENST00000311943 SLC38A8A6NNN8 435 aa12.82□□□□□ -0.36
SCFD1-201ENST00000311943 PI4K2BG5E9Z4 385 aa12.82□□□□□ -0.36
SCFD1-201ENST00000311943 TULP2O00295 520 aa12.82□□□□□ -0.36
SCFD1-201ENST00000311943 CILPO75339 1184 aa12.82□□□□□ -0.36
SCFD1-201ENST00000311943 PRAMEF12O95522 483 aa12.82□□□□□ -0.36
SCFD1-201ENST00000311943 CFHP08603 1231 aa12.82□□□□□ -0.36
SCFD1-201ENST00000311943 GTF2H1P32780 548 aa12.82□□□□□ -0.36
SCFD1-201ENST00000311943 KLK7P49862 253 aa12.82□□□□□ -0.36
SCFD1-201ENST00000311943 RAD23BP54727 409 aa12.82□□□□□ -0.36
SCFD1-201ENST00000311943 CFAP221Q4G0U5 840 aa12.82□□□□□ -0.36
SCFD1-201ENST00000311943 CCDC183Q5T5S1 534 aa12.82□□□□□ -0.36
SCFD1-201ENST00000311943 TXNDC8Q6A555 127 aa12.82□□□□□ -0.36
SCFD1-201ENST00000311943 IQCEQ6IPM2 695 aa12.82□□□□□ -0.36
SCFD1-201ENST00000311943 FAM35AQ86V20 835 aa12.82□□□□□ -0.36
SCFD1-201ENST00000311943 KREMEN1Q96MU8 473 aa12.82□□□□□ -0.36
SCFD1-201ENST00000311943 SMOQ99835 787 aa12.82□□□□□ -0.36
SCFD1-201ENST00000311943 ASAH2Q9NR71 780 aa12.82□□□□□ -0.36
SCFD1-201ENST00000311943 CCL26Q9Y258 94 aa12.82□□□□□ -0.36
SCFD1-201ENST00000311943 USTQ9Y2C2 406 aa12.82□□□□□ -0.36
SCFD1-201ENST00000311943 NR2E1Q9Y466 385 aa12.82□□□□□ -0.36
SCFD1-201ENST00000311943 NFE2L3Q9Y4A8 694 aa12.82□□□□□ -0.36
SCFD1-201ENST00000311943 DMDP11532 3685 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 SYCE3A1L190 88 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 DCXO43602 365 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 PAX3P23760 479 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 EPHA5P54756 1037 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 MARSP56192 900 aaKnown RBP12.81□□□□□ -0.36
SCFD1-201ENST00000311943 GPC5P78333 572 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 ZXDBP98169 803 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 HTR4Q13639 388 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 PPP1R26Q5T8A7 1209 aaPredicted RBP12.81□□□□□ -0.36
SCFD1-201ENST00000311943 CYP4A22Q5TCH4 519 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 ZDHHC14Q8IZN3 488 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 SLC4A11Q8NBS3 891 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 ACSF2Q96CM8 615 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms