RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 EP400NLQ6ZTU2 488 aa19.02■□□□□ 0.64
SSSCA1-201ENST00000309328 ITIH5Q86UX2 942 aa19.02■□□□□ 0.64
SSSCA1-201ENST00000309328 SLC4A11Q8NBS3 891 aa19.02■□□□□ 0.64
SSSCA1-201ENST00000309328 ATAD1Q8NBU5 361 aa19.02■□□□□ 0.64
SSSCA1-201ENST00000309328 LEMD2Q8NC56 503 aa19.02■□□□□ 0.64
SSSCA1-201ENST00000309328 PPM1EQ8WY54 764 aa19.02■□□□□ 0.64
SSSCA1-201ENST00000309328 MSLNLQ96KJ4 702 aa19.02■□□□□ 0.64
SSSCA1-201ENST00000309328 NAP1L5Q96NT1 182 aaPredicted RBP19.02■□□□□ 0.64
SSSCA1-201ENST00000309328 NECTIN4Q96NY8 510 aa19.02■□□□□ 0.64
SSSCA1-201ENST00000309328 PGLYRP2Q96PD5 576 aa19.02■□□□□ 0.64
SSSCA1-201ENST00000309328 NAA15Q9BXJ9 866 aaKnown RBP19.02■□□□□ 0.64
SSSCA1-201ENST00000309328 PRKD2Q9BZL6 878 aa19.02■□□□□ 0.64
SSSCA1-201ENST00000309328 ADAM7Q9H2U9 754 aa19.02■□□□□ 0.64
SSSCA1-201ENST00000309328 IFNKQ9P0W0 207 aa19.02■□□□□ 0.64
SSSCA1-201ENST00000309328 CLEC1BQ9P126 229 aa19.02■□□□□ 0.64
SSSCA1-201ENST00000309328 CEP72Q9P209 647 aa19.02■□□□□ 0.64
SSSCA1-201ENST00000309328 CD207Q9UJ71 328 aa19.02■□□□□ 0.64
SSSCA1-201ENST00000309328 MED7O43513 233 aa19.01■□□□□ 0.63
SSSCA1-201ENST00000309328 ATP2C2O75185 946 aa19.01■□□□□ 0.63
SSSCA1-201ENST00000309328 CCDC172P0C7W6 258 aa19.01■□□□□ 0.63
SSSCA1-201ENST00000309328 ANXA13P27216 316 aa19.01■□□□□ 0.63
SSSCA1-201ENST00000309328 LTBRP36941 435 aa19.01■□□□□ 0.63
SSSCA1-201ENST00000309328 RAPGEF1Q13905 1077 aa19.01■□□□□ 0.63
SSSCA1-201ENST00000309328 IQCEQ6IPM2 695 aa19.01■□□□□ 0.63
SSSCA1-201ENST00000309328 DPY19L2P1Q6NXN4 242 aa19.01■□□□□ 0.63
SSSCA1-201ENST00000309328 RBBP8NLQ8NC74 664 aaPredicted RBP19.01■□□□□ 0.63
SSSCA1-201ENST00000309328 SMRP1Q8NCR6 262 aa19.01■□□□□ 0.63
SSSCA1-201ENST00000309328 CYFIP2Q96F07 1278 aa19.01■□□□□ 0.63
SSSCA1-201ENST00000309328 RIPOR3Q96MK2 946 aa19.01■□□□□ 0.63
SSSCA1-201ENST00000309328 SPAG5Q96R06 1193 aa19.01■□□□□ 0.63
SSSCA1-201ENST00000309328 TWNKQ96RR1 684 aa19.01■□□□□ 0.63
SSSCA1-201ENST00000309328 SEPT5Q99719 369 aaPredicted RBP19.01■□□□□ 0.63
SSSCA1-201ENST00000309328 MED10Q9BTT4 135 aa19.01■□□□□ 0.63
SSSCA1-201ENST00000309328 GANQ9H2C0 597 aa19.01■□□□□ 0.63
SSSCA1-201ENST00000309328 HMGXB4Q9UGU5 601 aa19.01■□□□□ 0.63
SSSCA1-201ENST00000309328 YIPF1Q9Y548 306 aa19.01■□□□□ 0.63
SSSCA1-201ENST00000309328 NME7Q9Y5B8 376 aa19.01■□□□□ 0.63
SSSCA1-201ENST00000309328 FHOD1Q9Y613 1164 aa19.01■□□□□ 0.63
SSSCA1-201ENST00000309328 ITIH6Q6UXX5 1313 aa19■□□□□ 0.63
SSSCA1-201ENST00000309328 LINC01565O15544 149 aa19■□□□□ 0.63
SSSCA1-201ENST00000309328 TEX33O43247 280 aa19■□□□□ 0.63
SSSCA1-201ENST00000309328 FGF19O95750 216 aa19■□□□□ 0.63
SSSCA1-201ENST00000309328 SPATA31D3P0C874 917 aa19■□□□□ 0.63
SSSCA1-201ENST00000309328 FAM200BP0CF97 657 aa19■□□□□ 0.63
SSSCA1-201ENST00000309328 MTHFRP42898 656 aa19■□□□□ 0.63
SSSCA1-201ENST00000309328 POLR2FP61218 127 aaKnown RBP19■□□□□ 0.63
SSSCA1-201ENST00000309328 PTK2Q05397 1052 aa19■□□□□ 0.63
SSSCA1-201ENST00000309328 SMAD4Q13485 552 aaKnown RBP19■□□□□ 0.63
SSSCA1-201ENST00000309328 ARHGAP44Q17R89 818 aa19■□□□□ 0.63
SSSCA1-201ENST00000309328 LEXMQ3ZCV2 418 aa19■□□□□ 0.63
SSSCA1-201ENST00000309328 ZNF394Q53GI3 561 aa19■□□□□ 0.63
SSSCA1-201ENST00000309328 ATAT1Q5SQI0 421 aa19■□□□□ 0.63
SSSCA1-201ENST00000309328 SPATA31D4Q6ZUB0 917 aa19■□□□□ 0.63
SSSCA1-201ENST00000309328 CACNA2D4Q7Z3S7 1137 aa19■□□□□ 0.63
SSSCA1-201ENST00000309328 FAM71AQ8IYT1 594 aa19■□□□□ 0.63
SSSCA1-201ENST00000309328 KAT5Q92993 513 aa19■□□□□ 0.63
SSSCA1-201ENST00000309328 SPATA17Q96L03 361 aa19■□□□□ 0.63
SSSCA1-201ENST00000309328 C8orf48Q96LL4 319 aa19■□□□□ 0.63
SSSCA1-201ENST00000309328 NUCKS1Q9H1E3 243 aaKnown RBP19■□□□□ 0.63
SSSCA1-201ENST00000309328 PNPLA8Q9NP80 782 aa19■□□□□ 0.63
SSSCA1-201ENST00000309328 DMAP1Q9NPF5 467 aaPredicted RBP19■□□□□ 0.63
SSSCA1-201ENST00000309328 TMLHEQ9NVH6 421 aa19■□□□□ 0.63
SSSCA1-201ENST00000309328 HESX1Q9UBX0 185 aa19■□□□□ 0.63
SSSCA1-201ENST00000309328 CCDC195A0A1B0GUA6 201 aa18.99■□□□□ 0.63
SSSCA1-201ENST00000309328 F8VZ95 297 aa18.99■□□□□ 0.63
SSSCA1-201ENST00000309328 HCRTO43612 131 aa18.99■□□□□ 0.63
SSSCA1-201ENST00000309328 NOL4O94818 638 aa18.99■□□□□ 0.63
SSSCA1-201ENST00000309328 SEC24AO95486 1093 aa18.99■□□□□ 0.63
SSSCA1-201ENST00000309328 VNN2O95498 520 aa18.99■□□□□ 0.63
SSSCA1-201ENST00000309328 CD19P15391 556 aa18.99■□□□□ 0.63
SSSCA1-201ENST00000309328 KCNA5P22460 613 aa18.99■□□□□ 0.63
SSSCA1-201ENST00000309328 BDNFP23560 247 aa18.99■□□□□ 0.63
SSSCA1-201ENST00000309328 GRIK1P39086 918 aa18.99■□□□□ 0.63
SSSCA1-201ENST00000309328 TWF1Q12792 350 aa18.99■□□□□ 0.63
SSSCA1-201ENST00000309328 TRIM14Q14142 442 aa18.99■□□□□ 0.63
SSSCA1-201ENST00000309328 DRAP1Q14919 205 aaPredicted RBP18.99■□□□□ 0.63
SSSCA1-201ENST00000309328 SYCE2Q6PIF2 218 aa18.99■□□□□ 0.63
SSSCA1-201ENST00000309328 GPR149Q86SP6 731 aa18.99■□□□□ 0.63
SSSCA1-201ENST00000309328 FAM35AQ86V20 835 aa18.99■□□□□ 0.63
SSSCA1-201ENST00000309328 FUKQ8N0W3 1084 aa18.99■□□□□ 0.63
SSSCA1-201ENST00000309328 SLC2A14Q8TDB8 520 aa18.99■□□□□ 0.63
SSSCA1-201ENST00000309328 ZNF512Q96ME7 567 aaPredicted RBP18.99■□□□□ 0.63
SSSCA1-201ENST00000309328 B3GNT5Q9BYG0 378 aa18.99■□□□□ 0.63
SSSCA1-201ENST00000309328 XPO4Q9C0E2 1151 aaKnown RBP18.99■□□□□ 0.63
SSSCA1-201ENST00000309328 RBSNQ9H1K0 784 aa18.99■□□□□ 0.63
SSSCA1-201ENST00000309328 THEGQ9P2T0 379 aa18.99■□□□□ 0.63
SSSCA1-201ENST00000309328 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.99■□□□□ 0.63
SSSCA1-201ENST00000309328 CSH1P0DML2 217 aa18.98■□□□□ 0.63
SSSCA1-201ENST00000309328 CSH2P0DML3 217 aa18.98■□□□□ 0.63
SSSCA1-201ENST00000309328 CYP2F1P24903 491 aa18.98■□□□□ 0.63
SSSCA1-201ENST00000309328 USP8P40818 1118 aa18.98■□□□□ 0.63
SSSCA1-201ENST00000309328 STAT1P42224 750 aa18.98■□□□□ 0.63
SSSCA1-201ENST00000309328 BCAT1P54687 386 aa18.98■□□□□ 0.63
SSSCA1-201ENST00000309328 CNGA2Q16280 664 aa18.98■□□□□ 0.63
SSSCA1-201ENST00000309328 TAF12Q16514 161 aa18.98■□□□□ 0.63
SSSCA1-201ENST00000309328 GJB7Q6PEY0 223 aa18.98■□□□□ 0.63
SSSCA1-201ENST00000309328 C12orf29Q8N999 325 aa18.98■□□□□ 0.63
SSSCA1-201ENST00000309328 ZNF397Q8NF99 534 aaPredicted RBP18.98■□□□□ 0.63
SSSCA1-201ENST00000309328 SMG7Q92540 1137 aaKnown RBP18.98■□□□□ 0.63
SSSCA1-201ENST00000309328 PSMG2Q969U7 264 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms