RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 ZNF852Q6ZMS4 543 aa18.22■□□□□ 0.51
HMGCLL1-202ENST00000308161 FRMD5Q7Z6J6 570 aa18.22■□□□□ 0.51
HMGCLL1-202ENST00000308161 MAB21L3Q8N8X9 362 aa18.22■□□□□ 0.51
HMGCLL1-202ENST00000308161 TTC16Q8NEE8 873 aa18.22■□□□□ 0.51
HMGCLL1-202ENST00000308161 TTC8Q8TAM2 541 aa18.22■□□□□ 0.51
HMGCLL1-202ENST00000308161 CSGALNACT1Q8TDX6 532 aa18.22■□□□□ 0.51
HMGCLL1-202ENST00000308161 PARD3BQ8TEW8 1205 aa18.22■□□□□ 0.51
HMGCLL1-202ENST00000308161 SYAP1Q96A49 352 aaPredicted RBP18.22■□□□□ 0.51
HMGCLL1-202ENST00000308161 CCDC34Q96HJ3 373 aa18.22■□□□□ 0.51
HMGCLL1-202ENST00000308161 ZFYVE19Q96K21 471 aa18.22■□□□□ 0.51
HMGCLL1-202ENST00000308161 DMAC2Q9NW81 257 aa18.22■□□□□ 0.51
HMGCLL1-202ENST00000308161 DLGAP2Q9P1A6 1054 aa18.22■□□□□ 0.51
HMGCLL1-202ENST00000308161 MAGEC2Q9UBF1 373 aaPredicted RBP18.22■□□□□ 0.51
HMGCLL1-202ENST00000308161 FRMD4BQ9Y2L6 1034 aa18.22■□□□□ 0.51
HMGCLL1-202ENST00000308161 PIAS3Q9Y6X2 628 aa18.22■□□□□ 0.51
HMGCLL1-202ENST00000308161 SLC38A8A6NNN8 435 aa18.21■□□□□ 0.51
HMGCLL1-202ENST00000308161 BDNFP23560 247 aa18.21■□□□□ 0.51
HMGCLL1-202ENST00000308161 DLG4P78352 724 aa18.21■□□□□ 0.51
HMGCLL1-202ENST00000308161 NCOA4Q13772 614 aa18.21■□□□□ 0.51
HMGCLL1-202ENST00000308161 CFAP221Q4G0U5 840 aa18.21■□□□□ 0.51
HMGCLL1-202ENST00000308161 FAM171BQ6P995 826 aa18.21■□□□□ 0.51
HMGCLL1-202ENST00000308161 LIMS2Q7Z4I7 341 aa18.21■□□□□ 0.51
HMGCLL1-202ENST00000308161 SLC9A9Q8IVB4 645 aa18.21■□□□□ 0.51
HMGCLL1-202ENST00000308161 MRPS31Q92665 395 aaKnown RBP18.21■□□□□ 0.51
HMGCLL1-202ENST00000308161 FUBP3Q96I24 572 aaKnown RBP eCLIP18.21■□□□□ 0.51
HMGCLL1-202ENST00000308161 SLC46A2Q9BY10 475 aa18.21■□□□□ 0.51
HMGCLL1-202ENST00000308161 TRPC7Q9HCX4 862 aa18.21■□□□□ 0.51
HMGCLL1-202ENST00000308161 SPATA6Q9NWH7 488 aaPredicted RBP18.21■□□□□ 0.51
HMGCLL1-202ENST00000308161 MRPS17Q9Y2R5 130 aaKnown RBP18.21■□□□□ 0.51
HMGCLL1-202ENST00000308161 MIA3Q5JRA6 1907 aa18.2■□□□□ 0.5
HMGCLL1-202ENST00000308161 MYO15AQ9UKN7 3530 aa18.2■□□□□ 0.5
HMGCLL1-202ENST00000308161 VPS13AQ96RL7 3174 aa18.2■□□□□ 0.5
HMGCLL1-202ENST00000308161 A8MXQ7 604 aa18.2■□□□□ 0.5
HMGCLL1-202ENST00000308161 GFRA3O60609 400 aa18.2■□□□□ 0.5
HMGCLL1-202ENST00000308161 F11P03951 625 aa18.2■□□□□ 0.5
HMGCLL1-202ENST00000308161 NR2F2P24468 414 aa18.2■□□□□ 0.5
HMGCLL1-202ENST00000308161 ATICP31939 592 aa18.2■□□□□ 0.5
HMGCLL1-202ENST00000308161 AVPR1AP37288 418 aa18.2■□□□□ 0.5
HMGCLL1-202ENST00000308161 GRIK1P39086 918 aa18.2■□□□□ 0.5
HMGCLL1-202ENST00000308161 RAP1GAPP47736 663 aa18.2■□□□□ 0.5
HMGCLL1-202ENST00000308161 KPNA1P52294 538 aaPredicted RBP18.2■□□□□ 0.5
HMGCLL1-202ENST00000308161 AP3M2P53677 418 aa18.2■□□□□ 0.5
HMGCLL1-202ENST00000308161 PNOCQ13519 176 aa18.2■□□□□ 0.5
HMGCLL1-202ENST00000308161 MAPRE1Q15691 268 aaKnown RBP18.2■□□□□ 0.5
HMGCLL1-202ENST00000308161 ZNF667Q5HYK9 610 aa18.2■□□□□ 0.5
HMGCLL1-202ENST00000308161 TXNDC8Q6A555 127 aa18.2■□□□□ 0.5
HMGCLL1-202ENST00000308161 TMEM150AQ86TG1 271 aa18.2■□□□□ 0.5
HMGCLL1-202ENST00000308161 C1orf210Q8IVY1 113 aa18.2■□□□□ 0.5
HMGCLL1-202ENST00000308161 SMYD4Q8IYR2 804 aaPredicted RBP18.2■□□□□ 0.5
HMGCLL1-202ENST00000308161 PCED1BQ96HM7 432 aa18.2■□□□□ 0.5
HMGCLL1-202ENST00000308161 LRRC3BQ96PB8 259 aa18.2■□□□□ 0.5
HMGCLL1-202ENST00000308161 XYLT2Q9H1B5 865 aa18.2■□□□□ 0.5
HMGCLL1-202ENST00000308161 DPEP3Q9H4B8 488 aa18.2■□□□□ 0.5
HMGCLL1-202ENST00000308161 SMYD3Q9H7B4 428 aa18.2■□□□□ 0.5
HMGCLL1-202ENST00000308161 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.2■□□□□ 0.5
HMGCLL1-202ENST00000308161 NME7Q9Y5B8 376 aa18.2■□□□□ 0.5
HMGCLL1-202ENST00000308161 TICRRQ7Z2Z1 1910 aa18.2■□□□□ 0.5
HMGCLL1-202ENST00000308161 ZFHX2Q9C0A1 2572 aaPredicted RBP18.19■□□□□ 0.5
HMGCLL1-202ENST00000308161 USP34Q70CQ2 3546 aa18.19■□□□□ 0.5
HMGCLL1-202ENST00000308161 CHADO15335 359 aa18.19■□□□□ 0.5
HMGCLL1-202ENST00000308161 NCAM2O15394 837 aa18.19■□□□□ 0.5
HMGCLL1-202ENST00000308161 TACC1O75410 805 aa18.19■□□□□ 0.5
HMGCLL1-202ENST00000308161 ANXA13P27216 316 aa18.19■□□□□ 0.5
HMGCLL1-202ENST00000308161 SOX9P48436 509 aa18.19■□□□□ 0.5
HMGCLL1-202ENST00000308161 CDH8P55286 799 aa18.19■□□□□ 0.5
HMGCLL1-202ENST00000308161 FCHO2Q0JRZ9 810 aa18.19■□□□□ 0.5
HMGCLL1-202ENST00000308161 CMTM8Q8IZV2 173 aa18.19■□□□□ 0.5
HMGCLL1-202ENST00000308161 MYCBPAPQ8TBZ2 947 aa18.19■□□□□ 0.5
HMGCLL1-202ENST00000308161 BPIFB1Q8TDL5 484 aa18.19■□□□□ 0.5
HMGCLL1-202ENST00000308161 FAM3CQ92520 227 aa18.19■□□□□ 0.5
HMGCLL1-202ENST00000308161 NELL2Q99435 816 aa18.19■□□□□ 0.5
HMGCLL1-202ENST00000308161 MMRN2Q9H8L6 949 aa18.19■□□□□ 0.5
HMGCLL1-202ENST00000308161 UXTQ9UBK9 157 aaPredicted RBP18.19■□□□□ 0.5
HMGCLL1-202ENST00000308161 MAN2B1O00754 1011 aa18.18■□□□□ 0.5
HMGCLL1-202ENST00000308161 NOL4O94818 638 aa18.18■□□□□ 0.5
HMGCLL1-202ENST00000308161 VNN1O95497 513 aa18.18■□□□□ 0.5
HMGCLL1-202ENST00000308161 STAU1O95793 577 aaKnown RBP18.18■□□□□ 0.5
HMGCLL1-202ENST00000308161 C4BPAP04003 597 aaKnown RBP18.18■□□□□ 0.5
HMGCLL1-202ENST00000308161 PTPN1P18031 435 aaKnown RBP18.18■□□□□ 0.5
HMGCLL1-202ENST00000308161 CCNE1P24864 410 aa18.18■□□□□ 0.5
HMGCLL1-202ENST00000308161 NBL1P41271 181 aa18.18■□□□□ 0.5
HMGCLL1-202ENST00000308161 MAGEA11P43364 429 aa18.18■□□□□ 0.5
HMGCLL1-202ENST00000308161 KCNB1Q14721 858 aa18.18■□□□□ 0.5
HMGCLL1-202ENST00000308161 ARHGAP29Q52LW3 1261 aa18.18■□□□□ 0.5
HMGCLL1-202ENST00000308161 CELF5Q8N6W0 485 aaKnown RBP18.18■□□□□ 0.5
HMGCLL1-202ENST00000308161 OSBPL6Q9BZF3 934 aa18.18■□□□□ 0.5
HMGCLL1-202ENST00000308161 GTSE1Q9NYZ3 720 aa18.18■□□□□ 0.5
HMGCLL1-202ENST00000308161 TRAF3IP3Q9Y228 551 aa18.18■□□□□ 0.5
HMGCLL1-202ENST00000308161 CCL26Q9Y258 94 aa18.18■□□□□ 0.5
HMGCLL1-202ENST00000308161 R4GN57 208 aa18.18■□□□□ 0.5
HMGCLL1-202ENST00000308161 NUP210Q8TEM1 1887 aaPredicted RBP18.17■□□□□ 0.5
HMGCLL1-202ENST00000308161 ARNTLO00327 626 aa18.17■□□□□ 0.5
HMGCLL1-202ENST00000308161 LAMTOR5O43504 91 aa18.17■□□□□ 0.5
HMGCLL1-202ENST00000308161 TADA3O75528 432 aa18.17■□□□□ 0.5
HMGCLL1-202ENST00000308161 TRIM49P0CI25 452 aa18.17■□□□□ 0.5
HMGCLL1-202ENST00000308161 TRIM49CP0CI26 452 aa18.17■□□□□ 0.5
HMGCLL1-202ENST00000308161 DDX6P26196 483 aaKnown RBP eCLIP18.17■□□□□ 0.5
HMGCLL1-202ENST00000308161 PIK3CAP42336 1068 aa18.17■□□□□ 0.5
HMGCLL1-202ENST00000308161 VAMP7P51809 220 aa18.17■□□□□ 0.5
HMGCLL1-202ENST00000308161 TNK2Q07912 1038 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms