RNA–Protein interactions for RNA: ENST00000307522.3

CCDC8-201, Transcript of coiled-coil domain containing 8, humanhuman

APPRIS P1 BASIC

Gene CCDC8, Length 3,213 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC8-201ENST00000307522 TMEM120AQ9BXJ8 343 aa17.02■□□□□ 0.32
CCDC8-201ENST00000307522 UBE2TQ9NPD8 197 aaPredicted RBP17.02■□□□□ 0.32
CCDC8-201ENST00000307522 ASTN1O14525 1302 aa17.02■□□□□ 0.31
CCDC8-201ENST00000307522 ANKRD62A6NC57 917 aa17.02■□□□□ 0.31
CCDC8-201ENST00000307522 TGFB1I1O43294 461 aa17.02■□□□□ 0.31
CCDC8-201ENST00000307522 GCAP28676 217 aa17.02■□□□□ 0.31
CCDC8-201ENST00000307522 CCR3P51677 355 aa17.02■□□□□ 0.31
CCDC8-201ENST00000307522 PPP2R5EQ16537 467 aa17.02■□□□□ 0.31
CCDC8-201ENST00000307522 PDK4Q16654 411 aa17.02■□□□□ 0.31
CCDC8-201ENST00000307522 PCNX4Q63HM2 1172 aa17.02■□□□□ 0.31
CCDC8-201ENST00000307522 CBWD1Q9BRT8 395 aa17.02■□□□□ 0.31
CCDC8-201ENST00000307522 GRIP2Q9C0E4 1043 aa17.02■□□□□ 0.31
CCDC8-201ENST00000307522 GPR88Q9GZN0 384 aa17.02■□□□□ 0.31
CCDC8-201ENST00000307522 TUT1Q9H6E5 874 aaKnown RBP17.02■□□□□ 0.31
CCDC8-201ENST00000307522 PARVGQ9HBI0 331 aa17.02■□□□□ 0.31
CCDC8-201ENST00000307522 SLC38A10Q9HBR0 1119 aa17.02■□□□□ 0.31
CCDC8-201ENST00000307522 AK5Q9Y6K8 562 aa17.02■□□□□ 0.31
CCDC8-201ENST00000307522 UMODL1Q5DID0 1318 aa17.01■□□□□ 0.31
CCDC8-201ENST00000307522 MTA1Q13330 715 aa17.01■□□□□ 0.31
CCDC8-201ENST00000307522 PHLDB3Q6NSJ2 640 aa17.01■□□□□ 0.31
CCDC8-201ENST00000307522 CCDC62Q6P9F0 684 aa17.01■□□□□ 0.31
CCDC8-201ENST00000307522 TRIM67Q6ZTA4 783 aa17.01■□□□□ 0.31
CCDC8-201ENST00000307522 TTC17Q96AE7 1141 aa17.01■□□□□ 0.31
CCDC8-201ENST00000307522 COMMD3-BMI1R4GMX3 469 aa17.01■□□□□ 0.31
CCDC8-201ENST00000307522 CCDC195A0A1B0GUA6 201 aa17.01■□□□□ 0.31
CCDC8-201ENST00000307522 PGK2P07205 417 aa17.01■□□□□ 0.31
CCDC8-201ENST00000307522 PCSK6P29122 969 aa17.01■□□□□ 0.31
CCDC8-201ENST00000307522 ARFIP2P53365 341 aa17.01■□□□□ 0.31
CCDC8-201ENST00000307522 EPHB1P54762 984 aa17.01■□□□□ 0.31
CCDC8-201ENST00000307522 SEZ6Q53EL9 994 aa17.01■□□□□ 0.31
CCDC8-201ENST00000307522 SH3D19Q5HYK7 790 aa17.01■□□□□ 0.31
CCDC8-201ENST00000307522 KAZNQ674X7 775 aa17.01■□□□□ 0.31
CCDC8-201ENST00000307522 SWSAP1Q6NVH7 229 aa17.01■□□□□ 0.31
CCDC8-201ENST00000307522 C1orf186Q6ZWK4 172 aa17.01■□□□□ 0.31
CCDC8-201ENST00000307522 ARHGAP18Q8N392 663 aa17.01■□□□□ 0.31
CCDC8-201ENST00000307522 PTCD3Q96EY7 689 aaKnown RBP17.01■□□□□ 0.31
CCDC8-201ENST00000307522 MBOAT7Q96N66 472 aa17.01■□□□□ 0.31
CCDC8-201ENST00000307522 PCDHB18PQ96TA0 734 aa17.01■□□□□ 0.31
CCDC8-201ENST00000307522 METTL14Q9HCE5 456 aaKnown RBP17.01■□□□□ 0.31
CCDC8-201ENST00000307522 DOLKQ9UPQ8 538 aa17.01■□□□□ 0.31
CCDC8-201ENST00000307522 ARHGAP42A6NI28 874 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 TMCC1O94876 653 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 IVDP26440 423 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 CIITAP33076 1130 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 MAGEA4P43358 317 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 ADARP55265 1226 aaKnown RBP17■□□□□ 0.31
CCDC8-201ENST00000307522 HPCAP84074 193 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 PGM5Q15124 567 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 ZNF568Q3ZCX4 644 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 SCUBE1Q8IWY4 988 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 FAM186BQ8IYM0 893 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 HAPLN3Q96S86 360 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 C10orf88Q9H8K7 445 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 ARFGEF1Q9Y6D6 1849 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 WDR46O15213 610 aaKnown RBP17■□□□□ 0.31
CCDC8-201ENST00000307522 GAD2Q05329 585 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 GK3PQ14409 553 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 SLC45A4Q5BKX6 768 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 DAW1Q8N136 415 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 RBM15BQ8NDT2 890 aaKnown RBP17■□□□□ 0.31
CCDC8-201ENST00000307522 PIP4K2CQ8TBX8 421 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 CCDC77Q9BR77 488 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 SIKE1Q9BRV8 207 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 LRRC27Q9C0I9 530 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 PDE5AO76074 875 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 SGPL1O95470 568 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 TROVE2P10155 538 aaKnown RBP eCLIP17■□□□□ 0.31
CCDC8-201ENST00000307522 MYL2P10916 166 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 PEX2P28328 305 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 RHBDF2Q6PJF5 856 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 ZBTB46Q86UZ6 589 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 TREML1Q86YW5 311 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 SMC1BQ8NDV3 1235 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 ZNF564Q8TBZ8 553 aaPredicted RBP17■□□□□ 0.31
CCDC8-201ENST00000307522 AGPAT1Q99943 283 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 KLHL4Q9C0H6 718 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 GABBR1Q9UBS5 961 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 APPL1Q9UKG1 709 aa17■□□□□ 0.31
CCDC8-201ENST00000307522 RBM47A0AV96 593 aaKnown RBP16.99■□□□□ 0.31
CCDC8-201ENST00000307522 PIK3CDO00329 1044 aa16.99■□□□□ 0.31
CCDC8-201ENST00000307522 FOXD2O60548 495 aaPredicted RBP16.99■□□□□ 0.31
CCDC8-201ENST00000307522 TFPTP0C1Z6 253 aa16.99■□□□□ 0.31
CCDC8-201ENST00000307522 GCLMP48507 274 aa16.99■□□□□ 0.31
CCDC8-201ENST00000307522 FRMD5Q7Z6J6 570 aa16.99■□□□□ 0.31
CCDC8-201ENST00000307522 DENND1AQ8TEH3 1009 aa16.99■□□□□ 0.31
CCDC8-201ENST00000307522 ZNF653Q96CK0 615 aa16.99■□□□□ 0.31
CCDC8-201ENST00000307522 GCNAQ96QF7 691 aa16.99■□□□□ 0.31
CCDC8-201ENST00000307522 IWS1Q96ST2 819 aa16.99■□□□□ 0.31
CCDC8-201ENST00000307522 PDCD2LQ9BRP1 358 aa16.99■□□□□ 0.31
CCDC8-201ENST00000307522 INTS2Q9H0H0 1204 aaKnown RBP16.99■□□□□ 0.31
CCDC8-201ENST00000307522 TRAF3IP3Q9Y228 551 aa16.99■□□□□ 0.31
CCDC8-201ENST00000307522 E5RJQ4 531 aa16.99■□□□□ 0.31
CCDC8-201ENST00000307522 C2CD2LO14523 706 aa16.99■□□□□ 0.31
CCDC8-201ENST00000307522 FCHO1O14526 889 aa16.99■□□□□ 0.31
CCDC8-201ENST00000307522 NR3C2P08235 984 aa16.99■□□□□ 0.31
CCDC8-201ENST00000307522 MARSP56192 900 aaKnown RBP16.99■□□□□ 0.31
CCDC8-201ENST00000307522 PEX6Q13608 980 aa16.99■□□□□ 0.31
CCDC8-201ENST00000307522 VGLL4Q14135 290 aa16.99■□□□□ 0.31
CCDC8-201ENST00000307522 LRRC8BQ6P9F7 803 aa16.99■□□□□ 0.31
CCDC8-201ENST00000307522 ARHGEF19Q8IW93 802 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms