RNA–Protein interactions for RNA: ENST00000306593.1

PCDHGC4-201, Transcript of protocadherin gamma subfamily C, 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGC4, Length 4,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4-201ENST00000306593 BARX2Q9UMQ3 279 aaPredicted RBP11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 DRG1Q9Y295 367 aaKnown RBP11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 STRNO43815 780 aa11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 SHOX2O60902 331 aaPredicted RBP11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 TOMM70O94826 608 aa11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 HAUS5O94927 633 aa11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 MX2P20592 715 aa11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 ARFIP2P53365 341 aa11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 NOMO3P69849 1222 aa11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 LRRC34Q8IZ02 419 aa11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 SEMA4DQ92854 862 aa11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 SCYL1Q96KG9 808 aa11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 TBCBQ99426 244 aa11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 IKZF4Q9H2S9 585 aa11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 ZC3H7BQ9UGR2 993 aaKnown RBP11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 TNFSF13BQ9Y275 285 aa11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 AFG3L2Q9Y4W6 797 aa11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 ZMYM2Q9UBW7 1377 aa11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 KRT10P13645 584 aa11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 SERPINB6P35237 376 aa11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 OTUD4Q01804 1114 aaKnown RBP11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 PTP4A2Q12974 167 aa11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 PPIL2Q13356 520 aa11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 CAPSQ13938 189 aa11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 SMTNL2Q2TAL5 461 aa11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 ZDHHC17Q8IUH5 632 aa11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 APBB2Q92870 758 aa11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 PCDHB18PQ96TA0 734 aa11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 UBXN6Q9BZV1 441 aa11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 BFARQ9NZS9 450 aa11.4□□□□□ -0.58
PCDHGC4-201ENST00000306593 LTBP4Q8N2S1 1624 aa11.4□□□□□ -0.59
PCDHGC4-201ENST00000306593 A0A0B4J269 797 aa11.4□□□□□ -0.59
PCDHGC4-201ENST00000306593 CCL15-CCL14A0A0B4J2E2 113 aa11.4□□□□□ -0.59
PCDHGC4-201ENST00000306593 A0A0G2JND7 137 aa11.4□□□□□ -0.59
PCDHGC4-201ENST00000306593 DHX15O43143 795 aaKnown RBP11.4□□□□□ -0.59
PCDHGC4-201ENST00000306593 HMGCRP04035 888 aa11.4□□□□□ -0.59
PCDHGC4-201ENST00000306593 HOXC6P09630 235 aa11.4□□□□□ -0.59
PCDHGC4-201ENST00000306593 HOXD13P35453 343 aa11.4□□□□□ -0.59
PCDHGC4-201ENST00000306593 RGS7P49802 495 aa11.4□□□□□ -0.59
PCDHGC4-201ENST00000306593 CCL15Q16663 113 aa11.4□□□□□ -0.59
PCDHGC4-201ENST00000306593 ZNF410Q86VK4 478 aa11.4□□□□□ -0.59
PCDHGC4-201ENST00000306593 BBS5Q8N3I7 341 aa11.4□□□□□ -0.59
PCDHGC4-201ENST00000306593 ZCCHC9Q8N567 271 aaKnown RBP11.4□□□□□ -0.59
PCDHGC4-201ENST00000306593 C7orf43Q8WVR3 580 aa11.4□□□□□ -0.59
PCDHGC4-201ENST00000306593 ATXN2LQ8WWM7 1075 aaKnown RBP11.4□□□□□ -0.59
PCDHGC4-201ENST00000306593 CAMKK2Q96RR4 588 aa11.4□□□□□ -0.59
PCDHGC4-201ENST00000306593 XAB2Q9HCS7 855 aaKnown RBP11.4□□□□□ -0.59
PCDHGC4-201ENST00000306593 CXCL8P10145 99 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 CYP2C9P11712 490 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 ACTN3Q08043 901 aaPredicted RBP11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 Q3C1V9 767 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 UBA3Q8TBC4 463 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 NOCTQ9UK39 431 aaKnown RBP11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 USP18Q9UMW8 372 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 MAFBQ9Y5Q3 323 aaPredicted RBP11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 CNTNAP1P78357 1384 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 ARHGAP42A6NI28 874 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 PFDN6O15212 129 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 NPTXRO95502 500 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 LCP1P13796 627 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 TAF6P49848 677 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 JAG1P78504 1218 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 ZNF449Q6P9G9 518 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 RAPH1Q70E73 1250 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 FAM71DQ8N9W8 422 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 C12orf50Q8NA57 414 aaPredicted RBP11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 RNF139Q8WU17 664 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 MAML1Q92585 1016 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 ACO2Q99798 780 aaKnown RBP11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 ETNK1Q9HBU6 452 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 WRAP73Q9P2S5 460 aaPredicted RBP11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 ACTL7BQ9Y614 415 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 MYO5AQ9Y4I1 1855 aaKnown RBP11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 ASS1P00966 412 aaKnown RBP11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 INSRRP14616 1297 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 SULT1E1P49888 294 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 POLNQ7Z5Q5 900 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 AGGF1Q8N302 714 aaeCLIP11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 CFAP61Q8NHU2 1237 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 CCT6BQ92526 530 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 NRAPQ86VF7 1730 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 ATXN2Q99700 1313 aaKnown RBP11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 KPNA7A9QM74 516 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 DYNC1LI2O43237 492 aaPredicted RBP11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 SNRPAP09012 282 aaKnown RBP11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 PAMP19021 973 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 TSPY1Q01534 308 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 PTK7Q13308 1070 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 TTC39BQ5VTQ0 682 aaPredicted RBP11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 GSDMBQ8TAX9 411 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 DHX33Q9H6R0 707 aaKnown RBP11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 CHST7Q9NS84 486 aa11.39□□□□□ -0.59
PCDHGC4-201ENST00000306593 A0A087WZ62 844 aa11.38□□□□□ -0.59
PCDHGC4-201ENST00000306593 PSMD3O43242 534 aa11.38□□□□□ -0.59
PCDHGC4-201ENST00000306593 APRTP07741 180 aa11.38□□□□□ -0.59
PCDHGC4-201ENST00000306593 ABHD2P08910 425 aa11.38□□□□□ -0.59
PCDHGC4-201ENST00000306593 GNL1P36915 607 aaPredicted RBP11.38□□□□□ -0.59
PCDHGC4-201ENST00000306593 CPT1AP50416 773 aa11.38□□□□□ -0.59
PCDHGC4-201ENST00000306593 PDK1Q15118 436 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms