RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 M0QZQ0 153 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 MYO1FO00160 1098 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 SPOPO43791 374 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 ATP2C2O75185 946 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 ERBB2P04626 1255 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 SETSIPP0DME0 302 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 PTPN1P18031 435 aaKnown RBP13.73□□□□□ -0.21
CCDC7-202ENST00000302316 COMTP21964 271 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 BCAT1P54687 386 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 CCDC142Q17RM4 750 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 PKDCCQ504Y2 493 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 MDH1BQ5I0G3 518 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 FEZF2Q8TBJ5 459 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 SPATA18Q8TC71 538 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 SUSD3Q96L08 255 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 MCEEQ96PE7 176 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 SELENOOQ9BVL4 669 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 MRPL9Q9BYD2 267 aaKnown RBP13.73□□□□□ -0.21
CCDC7-202ENST00000302316 WDR35Q9P2L0 1181 aa13.73□□□□□ -0.21
CCDC7-202ENST00000302316 TTC3P53804 2025 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 MICAL3Q7RTP6 2002 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 TCRBV5S1A1TA0A578 114 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 TMEM189-UBE2V1I3L0A0 370 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 TULP2O00295 520 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 TIMP1P01033 207 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 CYP11A1P05108 521 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 RAG1P15918 1043 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 PCSK1P29120 753 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 TKTP29401 623 aaKnown RBP13.72□□□□□ -0.21
CCDC7-202ENST00000302316 GABRB2P47870 512 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 RGS7P49802 495 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 PDE4CQ08493 712 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 BST2Q10589 180 aaKnown RBP13.72□□□□□ -0.21
CCDC7-202ENST00000302316 CCDC181Q5TID7 509 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 KIAA0319Q5VV43 1072 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 DCUN1D2Q6PH85 259 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.72□□□□□ -0.21
CCDC7-202ENST00000302316 XYLT1Q86Y38 959 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 CRIPAKQ8N1N5 446 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 ANKRD52Q8NB46 1076 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 MIS12Q9H081 205 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 MKI67P46013 3256 aaKnown RBP13.72□□□□□ -0.21
CCDC7-202ENST00000302316 CTAGE15A4D2H0 777 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 TRIM43BA6NCK2 446 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 TBKBP1A7MCY6 615 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 E5RJQ4 531 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 KIAA0355O15063 1070 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 UPP2O95045 317 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 CTAGE8P0CG41 777 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 ITGB8P26012 769 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 GSCP56915 257 aaPredicted RBP13.72□□□□□ -0.21
CCDC7-202ENST00000302316 RPL7AP62424 266 aaKnown RBP13.72□□□□□ -0.21
CCDC7-202ENST00000302316 TAP1Q03518 808 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 CTAGE6Q86UF2 777 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 CREG2Q8IUH2 290 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 CTAGE4Q8IX94 777 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 TRIM43Q96BQ3 446 aaPredicted RBP13.72□□□□□ -0.21
CCDC7-202ENST00000302316 VWCEQ96DN2 955 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 HNRNPABQ99729 332 aaKnown RBP13.72□□□□□ -0.21
CCDC7-202ENST00000302316 NRDE2Q9H7Z3 1164 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.72□□□□□ -0.21
CCDC7-202ENST00000302316 CDH9Q9ULB4 789 aa13.72□□□□□ -0.21
CCDC7-202ENST00000302316 V9GYY5 206 aaPredicted RBP13.72□□□□□ -0.21
CCDC7-202ENST00000302316 MIF4GDA9UHW6 222 aaKnown RBP13.71□□□□□ -0.21
CCDC7-202ENST00000302316 PIK3R2O00459 728 aa13.71□□□□□ -0.21
CCDC7-202ENST00000302316 CTIFO43310 598 aaKnown RBP13.71□□□□□ -0.21
CCDC7-202ENST00000302316 TADA3O75528 432 aa13.71□□□□□ -0.21
CCDC7-202ENST00000302316 PROSCO94903 275 aa13.71□□□□□ -0.21
CCDC7-202ENST00000302316 ZNF268Q14587 947 aaPredicted RBP13.71□□□□□ -0.21
CCDC7-202ENST00000302316 PPP1R15BQ5SWA1 713 aa13.71□□□□□ -0.21
CCDC7-202ENST00000302316 OVOS1Q6IE37 1185 aa13.71□□□□□ -0.21
CCDC7-202ENST00000302316 PMF1Q6P1K2 205 aa13.71□□□□□ -0.21
CCDC7-202ENST00000302316 CPNE8Q86YQ8 564 aa13.71□□□□□ -0.21
CCDC7-202ENST00000302316 FUKQ8N0W3 1084 aa13.71□□□□□ -0.21
CCDC7-202ENST00000302316 LRRC43Q8N309 656 aa13.71□□□□□ -0.21
CCDC7-202ENST00000302316 SLC35F5Q8WV83 523 aa13.71□□□□□ -0.21
CCDC7-202ENST00000302316 MED10Q9BTT4 135 aa13.71□□□□□ -0.21
CCDC7-202ENST00000302316 CRTAC1Q9NQ79 661 aa13.71□□□□□ -0.21
CCDC7-202ENST00000302316 EHD2Q9NZN4 543 aa13.71□□□□□ -0.21
CCDC7-202ENST00000302316 HCSTQ9UBK5 93 aa13.71□□□□□ -0.21
CCDC7-202ENST00000302316 PCDHB8Q9UN66 801 aa13.71□□□□□ -0.21
CCDC7-202ENST00000302316 TMEM191CA6NGB0 347 aa13.7□□□□□ -0.22
CCDC7-202ENST00000302316 EFCAB8A8MWE9 144 aa13.7□□□□□ -0.22
CCDC7-202ENST00000302316 CLDN5O00501 218 aa13.7□□□□□ -0.22
CCDC7-202ENST00000302316 CES2O00748 559 aa13.7□□□□□ -0.22
CCDC7-202ENST00000302316 DDX3YO15523 660 aaKnown RBP13.7□□□□□ -0.22
CCDC7-202ENST00000302316 TADA2AO75478 443 aa13.7□□□□□ -0.22
CCDC7-202ENST00000302316 KRT3P12035 628 aa13.7□□□□□ -0.22
CCDC7-202ENST00000302316 CSF2RAP15509 400 aa13.7□□□□□ -0.22
CCDC7-202ENST00000302316 TYMPP19971 482 aa13.7□□□□□ -0.22
CCDC7-202ENST00000302316 PAFAH1B1P43034 410 aa13.7□□□□□ -0.22
CCDC7-202ENST00000302316 SLC8A3P57103 927 aa13.7□□□□□ -0.22
CCDC7-202ENST00000302316 FAM102AQ5T9C2 384 aaPredicted RBP13.7□□□□□ -0.22
CCDC7-202ENST00000302316 UBL4BQ8N7F7 174 aa13.7□□□□□ -0.22
CCDC7-202ENST00000302316 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.7□□□□□ -0.22
CCDC7-202ENST00000302316 GOLGA1Q92805 767 aa13.7□□□□□ -0.22
CCDC7-202ENST00000302316 MS4A14Q96JA4 679 aa13.7□□□□□ -0.22
CCDC7-202ENST00000302316 PBKQ96KB5 322 aa13.7□□□□□ -0.22
CCDC7-202ENST00000302316 RTP3Q9BQQ7 232 aa13.7□□□□□ -0.22
CCDC7-202ENST00000302316 METTL5Q9NRN9 209 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms