RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 EPS8L3Q8TE67 593 aaKnown RBP23.11■■□□□ 1.29
TPM4-201ENST00000300933 HEXIM2Q96MH2 286 aaKnown RBP23.11■■□□□ 1.29
TPM4-201ENST00000300933 SYNCQ9H7C4 482 aa23.11■■□□□ 1.29
TPM4-201ENST00000300933 MTRF1LQ9UGC7 380 aaKnown RBP23.11■■□□□ 1.29
TPM4-201ENST00000300933 FOXO6A8MYZ6 492 aa23.11■■□□□ 1.29
TPM4-201ENST00000300933 PSTPIP1O43586 416 aa23.11■■□□□ 1.29
TPM4-201ENST00000300933 ETS1P14921 441 aa23.11■■□□□ 1.29
TPM4-201ENST00000300933 DYNLT1P63172 113 aa23.11■■□□□ 1.29
TPM4-201ENST00000300933 FAM133BQ5BKY9 247 aaKnown RBP23.11■■□□□ 1.29
TPM4-201ENST00000300933 APOL6Q9BWW8 343 aa23.11■■□□□ 1.29
TPM4-201ENST00000300933 AAASQ9NRG9 546 aa23.11■■□□□ 1.29
TPM4-201ENST00000300933 CCDC189A1A4V9 331 aa23.1■■□□□ 1.29
TPM4-201ENST00000300933 CCT8L1PA6NM43 557 aa23.1■■□□□ 1.29
TPM4-201ENST00000300933 PPEF2O14830 753 aa23.1■■□□□ 1.29
TPM4-201ENST00000300933 STRNO43815 780 aa23.1■■□□□ 1.29
TPM4-201ENST00000300933 IL18RAPO95256 599 aa23.1■■□□□ 1.29
TPM4-201ENST00000300933 CHN1P15882 459 aa23.1■■□□□ 1.29
TPM4-201ENST00000300933 ITGA8P53708 1063 aa23.1■■□□□ 1.29
TPM4-201ENST00000300933 PSMC1P62191 440 aaKnown RBP23.1■■□□□ 1.29
TPM4-201ENST00000300933 GSTA5Q7RTV2 222 aa23.1■■□□□ 1.29
TPM4-201ENST00000300933 TBC1D1Q86TI0 1168 aaPredicted RBP23.1■■□□□ 1.29
TPM4-201ENST00000300933 KATNAL2Q8IYT4 538 aa23.1■■□□□ 1.29
TPM4-201ENST00000300933 STAMBPL1Q96FJ0 436 aa23.1■■□□□ 1.29
TPM4-201ENST00000300933 FAXDC2Q96IV6 333 aa23.1■■□□□ 1.29
TPM4-201ENST00000300933 PCSK1NQ9UHG2 260 aa23.1■■□□□ 1.29
TPM4-201ENST00000300933 LRRD1A4D1F6 860 aa23.1■■□□□ 1.29
TPM4-201ENST00000300933 DNAJC8O75937 253 aaPredicted RBP23.1■■□□□ 1.29
TPM4-201ENST00000300933 MCF2P10911 925 aa23.1■■□□□ 1.29
TPM4-201ENST00000300933 IVDP26440 423 aa23.1■■□□□ 1.29
TPM4-201ENST00000300933 IFI35P80217 286 aaPredicted RBP23.1■■□□□ 1.29
TPM4-201ENST00000300933 TMEM132DQ14C87 1099 aa23.1■■□□□ 1.29
TPM4-201ENST00000300933 DUSP28Q4G0W2 176 aa23.1■■□□□ 1.29
TPM4-201ENST00000300933 ERMARDQ5T6L9 678 aa23.1■■□□□ 1.29
TPM4-201ENST00000300933 TLDC1Q6P9B6 456 aa23.1■■□□□ 1.29
TPM4-201ENST00000300933 MAGEC3Q8TD91 643 aa23.1■■□□□ 1.29
TPM4-201ENST00000300933 KIF12Q96FN5 646 aa23.1■■□□□ 1.29
TPM4-201ENST00000300933 THOC1Q96FV9 657 aaKnown RBP23.1■■□□□ 1.29
TPM4-201ENST00000300933 DNPEPQ9ULA0 475 aa23.1■■□□□ 1.29
TPM4-201ENST00000300933 L3MBTL1Q9Y468 752 aa23.1■■□□□ 1.29
TPM4-201ENST00000300933 A0A1B0GUA9 196 aa23.09■■□□□ 1.29
TPM4-201ENST00000300933 ERBB2P04626 1255 aa23.09■■□□□ 1.29
TPM4-201ENST00000300933 EIF4BP23588 611 aaKnown RBP23.09■■□□□ 1.29
TPM4-201ENST00000300933 RAB6CQ53S08 254 aa23.09■■□□□ 1.29
TPM4-201ENST00000300933 OSMRQ99650 979 aa23.09■■□□□ 1.29
TPM4-201ENST00000300933 LPIN3Q9BQK8 851 aa23.09■■□□□ 1.29
TPM4-201ENST00000300933 EIF2AQ9BY44 585 aaKnown RBP23.09■■□□□ 1.29
TPM4-201ENST00000300933 RAB6CQ9H0N0 254 aa23.09■■□□□ 1.29
TPM4-201ENST00000300933 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.09■■□□□ 1.298e-7■■■■□ 22.5
TPM4-201ENST00000300933 NPTXRO95502 500 aa23.09■■□□□ 1.29
TPM4-201ENST00000300933 LSM8O95777 96 aaKnown RBP23.09■■□□□ 1.29
TPM4-201ENST00000300933 KRT3P12035 628 aa23.09■■□□□ 1.29
TPM4-201ENST00000300933 MYO1EQ12965 1108 aa23.09■■□□□ 1.29
TPM4-201ENST00000300933 CCDC38Q502W7 563 aa23.09■■□□□ 1.29
TPM4-201ENST00000300933 HP1BP3Q5SSJ5 553 aaPredicted RBP23.09■■□□□ 1.29
TPM4-201ENST00000300933 PLEKHH3Q7Z736 793 aa23.09■■□□□ 1.29
TPM4-201ENST00000300933 TAB3Q8N5C8 712 aaPredicted RBP23.09■■□□□ 1.29
TPM4-201ENST00000300933 ARFGAP1Q8N6T3 406 aa23.09■■□□□ 1.29
TPM4-201ENST00000300933 EXD1Q8NHP7 514 aa23.09■■□□□ 1.29
TPM4-201ENST00000300933 ACAP3Q96P50 834 aa23.09■■□□□ 1.29
TPM4-201ENST00000300933 SLITRK1Q96PX8 696 aa23.09■■□□□ 1.29
TPM4-201ENST00000300933 BCO2Q9BYV7 579 aa23.09■■□□□ 1.29
TPM4-201ENST00000300933 RRAGCQ9HB90 399 aa23.09■■□□□ 1.29
TPM4-201ENST00000300933 SNTG2Q9NY99 539 aa23.09■■□□□ 1.29
TPM4-201ENST00000300933 GGT7Q9UJ14 662 aa23.09■■□□□ 1.29
TPM4-201ENST00000300933 GRAP2O75791 330 aa23.08■■□□□ 1.29
TPM4-201ENST00000300933 PSMA2P25787 234 aa23.08■■□□□ 1.29
TPM4-201ENST00000300933 ZNF200P98182 395 aaPredicted RBP23.08■■□□□ 1.29
TPM4-201ENST00000300933 PTPN11Q06124 597 aaPredicted RBP23.08■■□□□ 1.29
TPM4-201ENST00000300933 GRB14Q14449 540 aa23.08■■□□□ 1.29
TPM4-201ENST00000300933 HIC1Q14526 733 aa23.08■■□□□ 1.29
TPM4-201ENST00000300933 CRYMQ14894 314 aa23.08■■□□□ 1.29
TPM4-201ENST00000300933 PPP1R15BQ5SWA1 713 aa23.08■■□□□ 1.29
TPM4-201ENST00000300933 SPRYD7Q5W111 196 aa23.08■■□□□ 1.29
TPM4-201ENST00000300933 ATL2Q8NHH9 583 aa23.08■■□□□ 1.29
TPM4-201ENST00000300933 NFKBIZQ9BYH8 718 aa23.08■■□□□ 1.29
TPM4-201ENST00000300933 FAM129AQ9BZQ8 928 aa23.08■■□□□ 1.29
TPM4-201ENST00000300933 METTL5Q9NRN9 209 aaKnown RBP23.08■■□□□ 1.29
TPM4-201ENST00000300933 DPP3Q9NY33 737 aa23.08■■□□□ 1.29
TPM4-201ENST00000300933 RBM47A0AV96 593 aaKnown RBP23.08■■□□□ 1.29
TPM4-201ENST00000300933 M0QYV0 167 aa23.08■■□□□ 1.29
TPM4-201ENST00000300933 IL1R2P27930 398 aa23.08■■□□□ 1.29
TPM4-201ENST00000300933 TAF5Q15542 800 aa23.08■■□□□ 1.29
TPM4-201ENST00000300933 ANKS4BQ8N8V4 417 aa23.08■■□□□ 1.29
TPM4-201ENST00000300933 CCDC63Q8NA47 563 aa23.08■■□□□ 1.29
TPM4-201ENST00000300933 ZMAT2Q96NC0 199 aaKnown RBP23.08■■□□□ 1.29
TPM4-201ENST00000300933 FLRT1Q9NZU1 646 aa23.08■■□□□ 1.29
TPM4-201ENST00000300933 MORF4L1Q9UBU8 362 aa23.08■■□□□ 1.29
TPM4-201ENST00000300933 PCDHGC3Q9UN70 934 aa23.08■■□□□ 1.29
TPM4-201ENST00000300933 RIPK2O43353 540 aa23.07■■□□□ 1.28
TPM4-201ENST00000300933 HCRTO43612 131 aa23.07■■□□□ 1.28
TPM4-201ENST00000300933 MICAL2O94851 1124 aa23.07■■□□□ 1.28
TPM4-201ENST00000300933 GCLCP48506 637 aaPredicted RBP23.07■■□□□ 1.28
TPM4-201ENST00000300933 NDST1P52848 882 aa23.07■■□□□ 1.28
TPM4-201ENST00000300933 TNFAIP2Q03169 654 aa23.07■■□□□ 1.28
TPM4-201ENST00000300933 DGKDQ16760 1214 aa23.07■■□□□ 1.28
TPM4-201ENST00000300933 FAM187BQ17R55 369 aa23.07■■□□□ 1.28
TPM4-201ENST00000300933 SH3PXD2AQ5TCZ1 1133 aa23.07■■□□□ 1.28
TPM4-201ENST00000300933 TMEM176AQ96HP8 235 aa23.07■■□□□ 1.28
TPM4-201ENST00000300933 ELAC2Q9BQ52 826 aaKnown RBP23.07■■□□□ 1.28
TPM4-201ENST00000300933 CDC42EP4Q9H3Q1 356 aaKnown RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms