RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 OTUD4Q01804 1114 aaKnown RBP13.57□□□□□ -0.24
HIF3A-204ENST00000300862 MCL1Q07820 350 aa13.57□□□□□ -0.24
HIF3A-204ENST00000300862 MGAT5Q09328 741 aa13.57□□□□□ -0.24
HIF3A-204ENST00000300862 DNAJC3Q13217 504 aa13.57□□□□□ -0.24
HIF3A-204ENST00000300862 SYCP2LQ5T4T6 812 aa13.57□□□□□ -0.24
HIF3A-204ENST00000300862 IER5Q5VY09 327 aa13.57□□□□□ -0.24
HIF3A-204ENST00000300862 TRABD2AQ86V40 505 aa13.57□□□□□ -0.24
HIF3A-204ENST00000300862 ZBTB8OSQ8IWT0 167 aa13.57□□□□□ -0.24
HIF3A-204ENST00000300862 KCNN1Q92952 543 aa13.57□□□□□ -0.24
HIF3A-204ENST00000300862 CPXM1Q96SM3 734 aa13.57□□□□□ -0.24
HIF3A-204ENST00000300862 ECT2Q9H8V3 914 aa13.57□□□□□ -0.24
HIF3A-204ENST00000300862 SLCO1B3Q9NPD5 702 aa13.57□□□□□ -0.24
HIF3A-204ENST00000300862 FAM47DPA6NHR8 397 aa13.56□□□□□ -0.24
HIF3A-204ENST00000300862 C3orf70A6NLC5 250 aaPredicted RBP13.56□□□□□ -0.24
HIF3A-204ENST00000300862 LRCH4O75427 683 aa13.56□□□□□ -0.24
HIF3A-204ENST00000300862 IQCF3P0C7M6 154 aa13.56□□□□□ -0.24
HIF3A-204ENST00000300862 EDNRBP24530 442 aa13.56□□□□□ -0.24
HIF3A-204ENST00000300862 NCALDP61601 193 aa13.56□□□□□ -0.24
HIF3A-204ENST00000300862 RIPK1Q13546 671 aa13.56□□□□□ -0.24
HIF3A-204ENST00000300862 NAA25Q14CX7 972 aa13.56□□□□□ -0.24
HIF3A-204ENST00000300862 MSS51Q4VC12 460 aa13.56□□□□□ -0.24
HIF3A-204ENST00000300862 ATF7IP2Q5U623 682 aa13.56□□□□□ -0.24
HIF3A-204ENST00000300862 LRRC38Q5VT99 294 aa13.56□□□□□ -0.24
HIF3A-204ENST00000300862 NSMCE1Q8WV22 266 aa13.56□□□□□ -0.24
HIF3A-204ENST00000300862 MAGEB18Q96M61 343 aa13.56□□□□□ -0.24
HIF3A-204ENST00000300862 TWNKQ96RR1 684 aa13.56□□□□□ -0.24
HIF3A-204ENST00000300862 GPR20Q99678 358 aa13.56□□□□□ -0.24
HIF3A-204ENST00000300862 PITPNM3Q9BZ71 974 aa13.56□□□□□ -0.24
HIF3A-204ENST00000300862 SDCBP2Q9H190 292 aa13.56□□□□□ -0.24
HIF3A-204ENST00000300862 SYNCQ9H7C4 482 aa13.56□□□□□ -0.24
HIF3A-204ENST00000300862 GRID1Q9ULK0 1009 aa13.56□□□□□ -0.24
HIF3A-204ENST00000300862 ARL2BPQ9Y2Y0 163 aa13.56□□□□□ -0.24
HIF3A-204ENST00000300862 L3MBTL1Q9Y468 752 aa13.56□□□□□ -0.24
HIF3A-204ENST00000300862 NFICP08651 508 aa13.56□□□□□ -0.24
HIF3A-204ENST00000300862 EIF4BP23588 611 aaKnown RBP13.56□□□□□ -0.24
HIF3A-204ENST00000300862 SSTR1P30872 391 aa13.56□□□□□ -0.24
HIF3A-204ENST00000300862 CTCFP49711 727 aaPredicted RBP13.56□□□□□ -0.24
HIF3A-204ENST00000300862 AP3M2P53677 418 aa13.56□□□□□ -0.24
HIF3A-204ENST00000300862 IGBP1P78318 339 aa13.56□□□□□ -0.24
HIF3A-204ENST00000300862 CDCA2Q69YH5 1023 aaPredicted RBP13.56□□□□□ -0.24
HIF3A-204ENST00000300862 DRICH1Q6PGQ1 229 aaPredicted RBP13.56□□□□□ -0.24
HIF3A-204ENST00000300862 RIOX2Q8IUF8 465 aa13.56□□□□□ -0.24
HIF3A-204ENST00000300862 FBXO16Q8IX29 292 aaPredicted RBP13.56□□□□□ -0.24
HIF3A-204ENST00000300862 PRCCQ92733 491 aaPredicted RBP13.56□□□□□ -0.24
HIF3A-204ENST00000300862 TRABDQ9H4I3 376 aa13.56□□□□□ -0.24
HIF3A-204ENST00000300862 SMYD3Q9H7B4 428 aa13.56□□□□□ -0.24
HIF3A-204ENST00000300862 METTL5Q9NRN9 209 aaKnown RBP13.56□□□□□ -0.24
HIF3A-204ENST00000300862 TCRBV7S3A2A0A539 114 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 TNNC2P02585 160 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 ABHD2P08910 425 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 RPA3P35244 121 aaPredicted RBP13.55□□□□□ -0.24
HIF3A-204ENST00000300862 SLC25A11Q02978 314 aaKnown RBP13.55□□□□□ -0.24
HIF3A-204ENST00000300862 MORF4L2Q15014 288 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 RAB6CQ53S08 254 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 FNBP1LQ5T0N5 605 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 WDR78Q5VTH9 848 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 PPP1R2P3Q6NXS1 205 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 MPZL3Q6UWV2 235 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 MAB21L3Q8N8X9 362 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 SLC35B2Q8TB61 432 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 CCHCR1Q8TD31 782 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 HSPH1Q92598 858 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 NKD2Q969F2 451 aaPredicted RBP13.55□□□□□ -0.24
HIF3A-204ENST00000300862 RAB6CQ9H0N0 254 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 GPRC5DQ9NZD1 345 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 SIX4Q9UIU6 781 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 DRG1Q9Y295 367 aaKnown RBP13.55□□□□□ -0.24
HIF3A-204ENST00000300862 C15orf41Q9Y2V0 281 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 SIP14410 1827 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 IGF2BP3O00425 579 aaKnown RBP eCLIP13.55□□□□□ -0.24
HIF3A-204ENST00000300862 NEBLO76041 1014 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 ERBB2P04626 1255 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 ITGAVP06756 1048 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 GPX6P59796 221 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 IL9RQ01113 521 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 TFDP1Q14186 410 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 MXD4Q14582 209 aaPredicted RBP13.55□□□□□ -0.24
HIF3A-204ENST00000300862 GALNTL6Q49A17 601 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 SH3D19Q5HYK7 790 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 PPP1R21Q6ZMI0 780 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 ECHDC2Q86YB7 292 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 ANKLE1Q8NAG6 615 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 AGAP11Q8TF27 550 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 ANKRD36BP1Q96IX9 119 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 L3MBTL3Q96JM7 780 aaPredicted RBP13.55□□□□□ -0.24
HIF3A-204ENST00000300862 SPATA33Q96N06 139 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 ZNF518BQ9C0D4 1074 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 C12orf65Q9H3J6 166 aaKnown RBP13.55□□□□□ -0.24
HIF3A-204ENST00000300862 PRKAG3Q9UGI9 489 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 PCDHGC3Q9UN70 934 aa13.55□□□□□ -0.24
HIF3A-204ENST00000300862 SOCS7O14512 581 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 IRF6O14896 467 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 ALOX15BO15296 676 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 CDH5P33151 784 aaPredicted RBP13.54□□□□□ -0.24
HIF3A-204ENST00000300862 RAD23BP54727 409 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 SLC8A3P57103 927 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 COPS2P61201 443 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 SLC1A5Q15758 541 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 HIF1AQ16665 826 aa13.54□□□□□ -0.24
HIF3A-204ENST00000300862 NOL9Q5SY16 702 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms