RNA–Protein interactions for RNA: ENST00000300590.7

SNX20-201, Transcript of sorting nexin 20, humanhuman

TSL 2 BASIC

Gene SNX20, Length 3,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-201ENST00000300590 PAPPAQ13219 1627 aa11.5□□□□□ -0.57
SNX20-201ENST00000300590 RIMBP2O15034 1052 aa11.5□□□□□ -0.57
SNX20-201ENST00000300590 GRIN3BO60391 1043 aa11.5□□□□□ -0.57
SNX20-201ENST00000300590 ZMPSTE24O75844 475 aa11.5□□□□□ -0.57
SNX20-201ENST00000300590 PROSCO94903 275 aa11.5□□□□□ -0.57
SNX20-201ENST00000300590 FUT4P22083 530 aa11.5□□□□□ -0.57
SNX20-201ENST00000300590 NT5C2P49902 561 aa11.5□□□□□ -0.57
SNX20-201ENST00000300590 RAP1GDS1P52306 607 aa11.5□□□□□ -0.57
SNX20-201ENST00000300590 ATXN3P54252 364 aaPredicted RBP11.5□□□□□ -0.57
SNX20-201ENST00000300590 ADARP55265 1226 aaKnown RBP11.5□□□□□ -0.57
SNX20-201ENST00000300590 BASP1P80723 227 aaKnown RBP11.5□□□□□ -0.57
SNX20-201ENST00000300590 BST1Q10588 318 aa11.5□□□□□ -0.57
SNX20-201ENST00000300590 KRT72Q14CN4 511 aa11.5□□□□□ -0.57
SNX20-201ENST00000300590 PRKD1Q15139 912 aaPredicted RBP11.5□□□□□ -0.57
SNX20-201ENST00000300590 PADI6Q6TGC4 694 aa11.5□□□□□ -0.57
SNX20-201ENST00000300590 RNF111Q6ZNA4 994 aa11.5□□□□□ -0.57
SNX20-201ENST00000300590 CDHR3Q6ZTQ4 885 aa11.5□□□□□ -0.57
SNX20-201ENST00000300590 DHDDSQ86SQ9 333 aa11.5□□□□□ -0.57
SNX20-201ENST00000300590 DAW1Q8N136 415 aa11.5□□□□□ -0.57
SNX20-201ENST00000300590 LXNQ9BS40 222 aa11.5□□□□□ -0.57
SNX20-201ENST00000300590 WDR18Q9BV38 432 aa11.5□□□□□ -0.57
SNX20-201ENST00000300590 KLHL4Q9C0H6 718 aa11.5□□□□□ -0.57
SNX20-201ENST00000300590 PCDHGB4Q9UN71 923 aa11.5□□□□□ -0.57
SNX20-201ENST00000300590 PCDHGB5Q9Y5G0 923 aa11.5□□□□□ -0.57
SNX20-201ENST00000300590 HEMK1Q9Y5R4 338 aaPredicted RBP11.5□□□□□ -0.57
SNX20-201ENST00000300590 TCRBV7S3A2A0A539 114 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 MAGEC1O60732 1142 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 TMCC1O94876 653 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 INHBAP08476 426 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 UQCRBP14927 111 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 PEX3P56589 373 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 RPL7AP62424 266 aaKnown RBP11.49□□□□□ -0.57
SNX20-201ENST00000300590 TCEAL1Q15170 157 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 CHI3L2Q15782 390 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 EFHC2Q5JST6 749 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 SH2D4BQ5SQS7 431 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 TXNRD3NBQ6F5E7 133 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 ATP11CQ8NB49 1132 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 NACC1Q96RE7 527 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 TAGLN3Q9UI15 199 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 A0A0J9YVX5 310 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 F8W8V4 182 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 COPEO14579 308 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 TBX3O15119 743 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 BUD23O43709 281 aaKnown RBP11.49□□□□□ -0.57
SNX20-201ENST00000300590 CLPTM1O96005 669 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 PENKP01210 267 aaPredicted RBP11.49□□□□□ -0.57
SNX20-201ENST00000300590 ADRA2BP18089 450 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 SLC18A1P54219 525 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 MAP3K10Q02779 954 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 AP3B2Q13367 1082 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 MPP3Q13368 585 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 MSLNQ13421 630 aaPredicted RBP11.49□□□□□ -0.57
SNX20-201ENST00000300590 SMAD1Q15797 465 aaKnown RBP11.49□□□□□ -0.57
SNX20-201ENST00000300590 SPDYAQ5MJ70 313 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 TPTE2Q6XPS3 522 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 DENND5BQ6ZUT9 1274 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 PDSS2Q86YH6 399 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 SEPT12Q8IYM1 358 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 OGFOD1Q8N543 542 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 PPM1NQ8N819 430 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 STKLD1Q8NE28 680 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 HELQQ8TDG4 1101 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 DDX1Q92499 740 aaKnown RBP11.49□□□□□ -0.57
SNX20-201ENST00000300590 IWS1Q96ST2 819 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 APOL6Q9BWW8 343 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 S100A14Q9HCY8 104 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 AK5Q9Y6K8 562 aa11.49□□□□□ -0.57
SNX20-201ENST00000300590 TM9SF1O15321 606 aa11.48□□□□□ -0.57
SNX20-201ENST00000300590 LMNB2Q03252 620 aa11.48□□□□□ -0.57
SNX20-201ENST00000300590 FOLH1Q04609 750 aa11.48□□□□□ -0.57
SNX20-201ENST00000300590 KBTBD12Q3ZCT8 623 aa11.48□□□□□ -0.57
SNX20-201ENST00000300590 RNASEH2BQ5TBB1 312 aaKnown RBP11.48□□□□□ -0.57
SNX20-201ENST00000300590 KRT39Q6A163 491 aa11.48□□□□□ -0.57
SNX20-201ENST00000300590 SPOPLQ6IQ16 392 aa11.48□□□□□ -0.57
SNX20-201ENST00000300590 RSPH3Q86UC2 560 aa11.48□□□□□ -0.57
SNX20-201ENST00000300590 RELL1Q8IUW5 271 aa11.48□□□□□ -0.57
SNX20-201ENST00000300590 PPP1R14CQ8TAE6 165 aa11.48□□□□□ -0.57
SNX20-201ENST00000300590 MBOAT7Q96N66 472 aa11.48□□□□□ -0.57
SNX20-201ENST00000300590 MMP19Q99542 508 aa11.48□□□□□ -0.57
SNX20-201ENST00000300590 IL1RAPL1Q9NZN1 696 aa11.48□□□□□ -0.57
SNX20-201ENST00000300590 DAGLAQ9Y4D2 1042 aa11.48□□□□□ -0.57
SNX20-201ENST00000300590 IVNS1ABPQ9Y6Y0 642 aa11.48□□□□□ -0.57
SNX20-201ENST00000300590 C15orf38-AP3S2A0A0A6YYH1 394 aa11.48□□□□□ -0.57
SNX20-201ENST00000300590 DNAJC6O75061 913 aa11.48□□□□□ -0.57
SNX20-201ENST00000300590 PROCP04070 461 aa11.48□□□□□ -0.57
SNX20-201ENST00000300590 DSG3P32926 999 aa11.48□□□□□ -0.57
SNX20-201ENST00000300590 GDF10P55107 478 aa11.48□□□□□ -0.57
SNX20-201ENST00000300590 HPCAP84074 193 aa11.48□□□□□ -0.57
SNX20-201ENST00000300590 BMPR2Q13873 1038 aa11.48□□□□□ -0.57
SNX20-201ENST00000300590 MORF4L2Q15014 288 aa11.48□□□□□ -0.57
SNX20-201ENST00000300590 SNRNP35Q16560 246 aaKnown RBP11.48□□□□□ -0.57
SNX20-201ENST00000300590 SMTNL2Q2TAL5 461 aa11.48□□□□□ -0.57
SNX20-201ENST00000300590 HSF5Q4G112 596 aaPredicted RBP11.48□□□□□ -0.57
SNX20-201ENST00000300590 EFHC1Q5JVL4 640 aa11.48□□□□□ -0.57
SNX20-201ENST00000300590 ADGRD1Q6QNK2 874 aa11.48□□□□□ -0.57
SNX20-201ENST00000300590 HAUS6Q7Z4H7 955 aa11.48□□□□□ -0.57
SNX20-201ENST00000300590 ARPINQ7Z6K5 226 aa11.48□□□□□ -0.57
SNX20-201ENST00000300590 DGCR14Q96DF8 476 aaKnown RBP11.48□□□□□ -0.57
SNX20-201ENST00000300590 HSPBAP1Q96EW2 488 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms