RNA–Protein interactions for RNA: ENST00000299238.6

HPS6-201, Transcript of HPS6, biogenesis of lysosomal organelles complex 2 subunit 3, humanhuman

APPRIS P1 BASIC

Gene HPS6, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS6-201ENST00000299238 FAM200BP0CF97 657 aa21.2■□□□□ 0.98
HPS6-201ENST00000299238 PTP4A2Q12974 167 aa21.2■□□□□ 0.98
HPS6-201ENST00000299238 LCA5Q86VQ0 697 aa21.2■□□□□ 0.98
HPS6-201ENST00000299238 ENDOVQ8N8Q3 282 aaKnown RBP21.2■□□□□ 0.98
HPS6-201ENST00000299238 PTPRN2Q92932 1015 aa21.2■□□□□ 0.98
HPS6-201ENST00000299238 GBP5Q96PP8 586 aa21.2■□□□□ 0.98
HPS6-201ENST00000299238 PCYT2Q99447 389 aa21.2■□□□□ 0.98
HPS6-201ENST00000299238 SLX1AQ9BQ83 275 aa21.2■□□□□ 0.98
HPS6-201ENST00000299238 TARS2Q9BW92 718 aaKnown RBP21.2■□□□□ 0.98
HPS6-201ENST00000299238 APOBEC3GQ9HC16 384 aaKnown RBP21.2■□□□□ 0.98
HPS6-201ENST00000299238 PRKAG3Q9UGI9 489 aa21.2■□□□□ 0.98
HPS6-201ENST00000299238 GSTTP1A0A1W2PQM5 241 aa21.2■□□□□ 0.98
HPS6-201ENST00000299238 ITIH2P19823 946 aa21.2■□□□□ 0.98
HPS6-201ENST00000299238 EPHB2P29323 1055 aa21.2■□□□□ 0.98
HPS6-201ENST00000299238 KLF1Q13351 362 aaPredicted RBP21.2■□□□□ 0.98
HPS6-201ENST00000299238 SCARA3Q6AZY7 606 aa21.2■□□□□ 0.98
HPS6-201ENST00000299238 MSTO1Q9BUK6 570 aa21.2■□□□□ 0.98
HPS6-201ENST00000299238 DENND2DQ9H6A0 471 aaPredicted RBP21.2■□□□□ 0.98
HPS6-201ENST00000299238 HNRNPRO43390 633 aaKnown RBP21.19■□□□□ 0.98
HPS6-201ENST00000299238 GH1P01241 217 aa21.19■□□□□ 0.98
HPS6-201ENST00000299238 ADCY1Q08828 1119 aa21.19■□□□□ 0.98
HPS6-201ENST00000299238 R3HDM1Q15032 1099 aaKnown RBP21.19■□□□□ 0.98
HPS6-201ENST00000299238 SYDE1Q6ZW31 735 aaPredicted RBP21.19■□□□□ 0.98
HPS6-201ENST00000299238 EXOC3L1Q86VI1 746 aa21.19■□□□□ 0.98
HPS6-201ENST00000299238 RIOX2Q8IUF8 465 aa21.19■□□□□ 0.98
HPS6-201ENST00000299238 ANKRD42Q8N9B4 389 aa21.19■□□□□ 0.98
HPS6-201ENST00000299238 SNF8Q96H20 258 aa21.19■□□□□ 0.98
HPS6-201ENST00000299238 C11orf70Q9BRQ4 267 aa21.19■□□□□ 0.98
HPS6-201ENST00000299238 ROPN1BQ9BZX4 212 aaPredicted RBP21.19■□□□□ 0.98
HPS6-201ENST00000299238 ROPN1Q9HAT0 212 aaPredicted RBP21.19■□□□□ 0.98
HPS6-201ENST00000299238 FBXO40Q9UH90 709 aa21.19■□□□□ 0.98
HPS6-201ENST00000299238 GSTA2P09210 222 aa21.19■□□□□ 0.98
HPS6-201ENST00000299238 UBTFL6P0CB48 400 aaPredicted RBP21.19■□□□□ 0.98
HPS6-201ENST00000299238 CUL2Q13617 745 aa21.19■□□□□ 0.98
HPS6-201ENST00000299238 KYNUQ16719 465 aa21.19■□□□□ 0.98
HPS6-201ENST00000299238 SLFN12LQ6IEE8 588 aa21.19■□□□□ 0.98
HPS6-201ENST00000299238 MYLK2Q9H1R3 596 aa21.19■□□□□ 0.98
HPS6-201ENST00000299238 KLHL11Q9NVR0 708 aa21.19■□□□□ 0.98
HPS6-201ENST00000299238 USTQ9Y2C2 406 aa21.19■□□□□ 0.98
HPS6-201ENST00000299238 LRCH1Q9Y2L9 728 aa21.19■□□□□ 0.98
HPS6-201ENST00000299238 TJP3O95049 919 aa21.18■□□□□ 0.98
HPS6-201ENST00000299238 ZCCHC18P0CG32 403 aa21.18■□□□□ 0.98
HPS6-201ENST00000299238 MAN1A1P33908 653 aa21.18■□□□□ 0.98
HPS6-201ENST00000299238 ITGA8P53708 1063 aa21.18■□□□□ 0.98
HPS6-201ENST00000299238 NOMO3P69849 1222 aa21.18■□□□□ 0.98
HPS6-201ENST00000299238 DEUP1Q05D60 604 aa21.18■□□□□ 0.98
HPS6-201ENST00000299238 MPP3Q13368 585 aa21.18■□□□□ 0.98
HPS6-201ENST00000299238 SEZ6Q53EL9 994 aa21.18■□□□□ 0.98
HPS6-201ENST00000299238 NRG4Q8WWG1 115 aa21.18■□□□□ 0.98
HPS6-201ENST00000299238 STMN4Q9H169 189 aaPredicted RBP21.18■□□□□ 0.98
HPS6-201ENST00000299238 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.18■□□□□ 0.98
HPS6-201ENST00000299238 NEU2Q9Y3R4 380 aa21.18■□□□□ 0.98
HPS6-201ENST00000299238 SOWAHBA6NEL2 793 aa21.18■□□□□ 0.98
HPS6-201ENST00000299238 RALAP11233 206 aa21.18■□□□□ 0.98
HPS6-201ENST00000299238 EDNRBP24530 442 aa21.18■□□□□ 0.98
HPS6-201ENST00000299238 CAPSQ13938 189 aa21.18■□□□□ 0.98
HPS6-201ENST00000299238 USH1CQ9Y6N9 552 aa21.18■□□□□ 0.98
HPS6-201ENST00000299238 A0A0B4J269 797 aa21.17■□□□□ 0.98
HPS6-201ENST00000299238 TAS2R40P59535 323 aa21.17■□□□□ 0.98
HPS6-201ENST00000299238 TARBP2Q15633 366 aaKnown RBP21.17■□□□□ 0.98
HPS6-201ENST00000299238 ANKS1BQ7Z6G8 1248 aa21.17■□□□□ 0.98
HPS6-201ENST00000299238 ABRAQ8N0Z2 381 aa21.17■□□□□ 0.98
HPS6-201ENST00000299238 SCG3Q8WXD2 468 aaKnown RBP21.17■□□□□ 0.98
HPS6-201ENST00000299238 CGRRF1Q99675 332 aa21.17■□□□□ 0.98
HPS6-201ENST00000299238 TBC1D10AQ9BXI6 508 aa21.17■□□□□ 0.98
HPS6-201ENST00000299238 ETNK2Q9NVF9 386 aa21.17■□□□□ 0.98
HPS6-201ENST00000299238 FUT4P22083 530 aa21.17■□□□□ 0.98
HPS6-201ENST00000299238 MAMLD1Q13495 774 aa21.17■□□□□ 0.98
HPS6-201ENST00000299238 PARP6Q2NL67 630 aa21.17■□□□□ 0.98
HPS6-201ENST00000299238 ERP27Q96DN0 273 aa21.17■□□□□ 0.98
HPS6-201ENST00000299238 SPATC1LQ9H0A9 340 aa21.17■□□□□ 0.98
HPS6-201ENST00000299238 LRMDAQ9H2I8 198 aa21.17■□□□□ 0.98
HPS6-201ENST00000299238 TBK1Q9UHD2 729 aa21.17■□□□□ 0.98
HPS6-201ENST00000299238 CNTN6Q9UQ52 1028 aa21.17■□□□□ 0.98
HPS6-201ENST00000299238 ADGRA2Q96PE1 1338 aa21.16■□□□□ 0.98
HPS6-201ENST00000299238 TMEM120BA0PK00 339 aa21.16■□□□□ 0.98
HPS6-201ENST00000299238 PSTPIP1O43586 416 aa21.16■□□□□ 0.98
HPS6-201ENST00000299238 PFDN1O60925 122 aa21.16■□□□□ 0.98
HPS6-201ENST00000299238 LDHAP00338 332 aaKnown RBP21.16■□□□□ 0.98
HPS6-201ENST00000299238 HARSP12081 509 aaKnown RBP21.16■□□□□ 0.98
HPS6-201ENST00000299238 CD58P19256 250 aa21.16■□□□□ 0.98
HPS6-201ENST00000299238 SKIV2L2P42285 1042 aaKnown RBP21.16■□□□□ 0.98
HPS6-201ENST00000299238 KHDC1Q4VXA5 237 aaKnown RBP21.16■□□□□ 0.98
HPS6-201ENST00000299238 ZNF449Q6P9G9 518 aa21.16■□□□□ 0.98
HPS6-201ENST00000299238 TMEM270Q6UE05 265 aa21.16■□□□□ 0.98
HPS6-201ENST00000299238 TRIM72Q6ZMU5 477 aa21.16■□□□□ 0.98
HPS6-201ENST00000299238 GADL1Q6ZQY3 521 aa21.16■□□□□ 0.98
HPS6-201ENST00000299238 GRK7Q8WTQ7 553 aa21.16■□□□□ 0.98
HPS6-201ENST00000299238 ARHGEF2Q92974 986 aaKnown RBP21.16■□□□□ 0.98
HPS6-201ENST00000299238 RBM47A0AV96 593 aaKnown RBP21.16■□□□□ 0.98
HPS6-201ENST00000299238 GAS8O95995 478 aa21.16■□□□□ 0.98
HPS6-201ENST00000299238 PENKP01210 267 aaPredicted RBP21.16■□□□□ 0.98
HPS6-201ENST00000299238 ADCY8P40145 1251 aa21.16■□□□□ 0.98
HPS6-201ENST00000299238 SNX30Q5VWJ9 437 aa21.16■□□□□ 0.98
HPS6-201ENST00000299238 PLEKHA7Q6IQ23 1121 aa21.16■□□□□ 0.98
HPS6-201ENST00000299238 VSIG1Q86XK7 387 aa21.16■□□□□ 0.98
HPS6-201ENST00000299238 PHF13Q86YI8 300 aaPredicted RBP21.16■□□□□ 0.98
HPS6-201ENST00000299238 MIPOL1Q8TD10 442 aa21.16■□□□□ 0.98
HPS6-201ENST00000299238 NRBP2Q9NSY0 501 aa21.16■□□□□ 0.98
HPS6-201ENST00000299238 KLHL14Q9P2G3 628 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms