RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 IGLV3-22A0A075B6J6 115 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 CFHP08603 1231 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 KLRC2P26717 231 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 SLC25A3Q00325 362 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 OTUD4Q01804 1114 aaKnown RBP11.94□□□□□ -0.5
TRUB1-201ENST00000298746 GSTA3Q16772 222 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 ANKRD22Q5VYY1 191 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 PPIL6Q8IXY8 311 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 KATNAL2Q8IYT4 538 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.94□□□□□ -0.5
TRUB1-201ENST00000298746 SNRNP27Q8WVK2 155 aaKnown RBP11.94□□□□□ -0.5
TRUB1-201ENST00000298746 USP6NLQ92738 828 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 E2F7Q96AV8 911 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 EBF3Q9H4W6 596 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 ZNF395Q9H8N7 513 aaPredicted RBP11.94□□□□□ -0.5
TRUB1-201ENST00000298746 SHOC2Q9UQ13 582 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 LAMB1P07942 1786 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 PAPPAQ13219 1627 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 TESPA1A2RU30 521 aaPredicted RBP11.94□□□□□ -0.5
TRUB1-201ENST00000298746 H7C0C1 242 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 HNRNPRO43390 633 aaKnown RBP11.94□□□□□ -0.5
TRUB1-201ENST00000298746 CRKP46108 304 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 ATP5OP48047 213 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 RARRES1P49788 294 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 MAMLD1Q13495 774 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 BMPR2Q13873 1038 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 MYBPC2Q14324 1141 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 SLC5A9Q2M3M2 681 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 KBTBD12Q3ZCT8 623 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 DNAL1Q4LDG9 190 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 SH2D4BQ5SQS7 431 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 C1orf220Q5T0J3 134 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 SPOCD1Q6ZMY3 1216 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 PCGF5Q86SE9 256 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 TDRPQ86YL5 185 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 ALLCQ8N6M5 410 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 FBXO27Q8NI29 283 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 NR1H4Q96RI1 486 aaPredicted RBP11.94□□□□□ -0.5
TRUB1-201ENST00000298746 AVENQ9NQS1 362 aaPredicted RBP11.94□□□□□ -0.5
TRUB1-201ENST00000298746 PPM1HQ9ULR3 514 aa11.94□□□□□ -0.5
TRUB1-201ENST00000298746 KRT37O76014 449 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 HLA-DRAP01903 254 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 WEE2P0C1S8 567 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 RARBP10826 455 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 DSG3P32926 999 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 ECE1P42892 770 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 PSMC5P62195 406 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 CDC16Q13042 620 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 FNBP1LQ5T0N5 605 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 DARS2Q6PI48 645 aaKnown RBP11.93□□□□□ -0.5
TRUB1-201ENST00000298746 FAM196AQ6ZSG2 479 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 RAB3IL1Q8TBN0 382 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 HSPH1Q92598 858 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 CEP170P1Q96L14 293 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 MIS12Q9H081 205 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 KCNH7Q9NS40 1196 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 RABGEF1Q9UJ41 708 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 TBX20Q9UMR3 447 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 MYH14Q7Z406 1995 aaKnown RBP11.93□□□□□ -0.5
TRUB1-201ENST00000298746 STAM2O75886 525 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 EIF2AK2P19525 551 aaKnown RBP11.93□□□□□ -0.5
TRUB1-201ENST00000298746 PSMA2P25787 234 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 ELK3P41970 407 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 NOVP48745 357 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 HIRAP54198 1017 aaPredicted RBP11.93□□□□□ -0.5
TRUB1-201ENST00000298746 GPX6P59796 221 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 UBAP2LQ14157 1087 aaKnown RBP11.93□□□□□ -0.5
TRUB1-201ENST00000298746 CYP4A22Q5TCH4 519 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 ICA1LQ8NDH6 482 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 MIPOL1Q8TD10 442 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 GATA6Q92908 595 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 DNAJC1Q96KC8 554 aaKnown RBP11.93□□□□□ -0.5
TRUB1-201ENST00000298746 SRPK1Q96SB4 655 aaKnown RBP11.93□□□□□ -0.5
TRUB1-201ENST00000298746 PPCSQ9HAB8 311 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 TAGLN3Q9UI15 199 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 RREB1Q92766 1687 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 PRR5-ARHGAP8B1AHC4 643 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 MCF2LO15068 1137 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 FAM200BP0CF97 657 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 GPC3P51654 580 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 ARHGAP8P85298 464 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 BST1Q10588 318 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 KLF1Q13351 362 aaPredicted RBP11.93□□□□□ -0.5
TRUB1-201ENST00000298746 CTC1Q2NKJ3 1217 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 TFDP3Q5H9I0 405 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 FAXCQ5TGI0 409 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 PRR5LQ6MZQ0 368 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 CASC4Q6P4E1 433 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 RSPH3Q86UC2 560 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 CERS5Q8N5B7 392 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 KCTD6Q8NC69 237 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 OR6Y1Q8NGX8 325 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 FAF2Q96CS3 445 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 PTCD3Q96EY7 689 aaKnown RBP11.93□□□□□ -0.5
TRUB1-201ENST00000298746 SLITRK1Q96PX8 696 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 CSRNP1Q96S65 589 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 PREBQ9HCU5 417 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 ETNK2Q9NVF9 386 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 TMOD2Q9NZR1 351 aa11.93□□□□□ -0.5
TRUB1-201ENST00000298746 KANSL3Q9P2N6 904 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms