RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 CHST7Q9NS84 486 aa27.07■■□□□ 1.92
SDCCAG3-201ENST00000298537 SIGLEC16A6NMB1 481 aa27.07■■□□□ 1.92
SDCCAG3-201ENST00000298537 GRAP2O75791 330 aa27.07■■□□□ 1.92
SDCCAG3-201ENST00000298537 TAF6P49848 677 aa27.07■■□□□ 1.92
SDCCAG3-201ENST00000298537 SNX1Q13596 522 aa27.07■■□□□ 1.92
SDCCAG3-201ENST00000298537 TRIM71Q2Q1W2 868 aaKnown RBP27.07■■□□□ 1.92
SDCCAG3-201ENST00000298537 RNF180Q86T96 592 aa27.07■■□□□ 1.92
SDCCAG3-201ENST00000298537 STRIP2Q9ULQ0 834 aa27.07■■□□□ 1.92
SDCCAG3-201ENST00000298537 PTPN22Q9Y2R2 807 aa27.07■■□□□ 1.92
SDCCAG3-201ENST00000298537 PSTPIP1O43586 416 aa27.06■■□□□ 1.92
SDCCAG3-201ENST00000298537 OAS2P29728 719 aaKnown RBP27.06■■□□□ 1.92
SDCCAG3-201ENST00000298537 FLT3P36888 993 aa27.06■■□□□ 1.92
SDCCAG3-201ENST00000298537 SCNN1GP51170 649 aa27.06■■□□□ 1.92
SDCCAG3-201ENST00000298537 HLTFQ14527 1009 aaKnown RBP eCLIP27.06■■□□□ 1.92
SDCCAG3-201ENST00000298537 TAF5Q15542 800 aa27.06■■□□□ 1.92
SDCCAG3-201ENST00000298537 PKDCCQ504Y2 493 aa27.06■■□□□ 1.92
SDCCAG3-201ENST00000298537 LHX8Q68G74 356 aa27.06■■□□□ 1.92
SDCCAG3-201ENST00000298537 CCDC137Q6PK04 289 aaKnown RBP27.06■■□□□ 1.92
SDCCAG3-201ENST00000298537 MAATS1Q7Z4T9 603 aa27.06■■□□□ 1.92
SDCCAG3-201ENST00000298537 RPAINQ86UA6 219 aa27.06■■□□□ 1.92
SDCCAG3-201ENST00000298537 JAMLQ86YT9 394 aa27.06■■□□□ 1.92
SDCCAG3-201ENST00000298537 NOD1Q9Y239 953 aa27.06■■□□□ 1.92
SDCCAG3-201ENST00000298537 ATP2C2O75185 946 aa27.06■■□□□ 1.92
SDCCAG3-201ENST00000298537 KRT10P13645 584 aa27.06■■□□□ 1.92
SDCCAG3-201ENST00000298537 ATF7P17544 494 aaPredicted RBP27.06■■□□□ 1.92
SDCCAG3-201ENST00000298537 PSMA2P25787 234 aa27.06■■□□□ 1.92
SDCCAG3-201ENST00000298537 HOXD10P28358 340 aa27.06■■□□□ 1.92
SDCCAG3-201ENST00000298537 MAN1A1P33908 653 aa27.06■■□□□ 1.92
SDCCAG3-201ENST00000298537 SH3PXD2AQ5TCZ1 1133 aa27.06■■□□□ 1.92
SDCCAG3-201ENST00000298537 FAM183BPQ6ZVS7 135 aa27.06■■□□□ 1.92
SDCCAG3-201ENST00000298537 ARL5CA6NH57 179 aa27.05■■□□□ 1.92
SDCCAG3-201ENST00000298537 ADORA2BP29275 332 aa27.05■■□□□ 1.92
SDCCAG3-201ENST00000298537 GNL1P36915 607 aaPredicted RBP27.05■■□□□ 1.92
SDCCAG3-201ENST00000298537 GABRB2P47870 512 aa27.05■■□□□ 1.92
SDCCAG3-201ENST00000298537 PAK2Q13177 524 aa27.05■■□□□ 1.92
SDCCAG3-201ENST00000298537 KATNAL2Q8IYT4 538 aa27.05■■□□□ 1.92
SDCCAG3-201ENST00000298537 C3orf58Q8NDZ4 430 aa27.05■■□□□ 1.92
SDCCAG3-201ENST00000298537 ZNF296Q8WUU4 475 aaPredicted RBP27.05■■□□□ 1.92
SDCCAG3-201ENST00000298537 GDAP2Q9NXN4 497 aa27.05■■□□□ 1.92
SDCCAG3-201ENST00000298537 SBDSQ9Y3A5 250 aaKnown RBP eCLIP27.05■■□□□ 1.92
SDCCAG3-201ENST00000298537 POLR3GO15318 223 aaPredicted RBP27.05■■□□□ 1.92
SDCCAG3-201ENST00000298537 MYCP01106 439 aaPredicted RBP27.05■■□□□ 1.92
SDCCAG3-201ENST00000298537 ACAT1P24752 427 aaKnown RBP27.05■■□□□ 1.92
SDCCAG3-201ENST00000298537 IL1R2P27930 398 aa27.05■■□□□ 1.92
SDCCAG3-201ENST00000298537 SMTNL2Q2TAL5 461 aa27.05■■□□□ 1.92
SDCCAG3-201ENST00000298537 FAM102AQ5T9C2 384 aaPredicted RBP27.05■■□□□ 1.92
SDCCAG3-201ENST00000298537 RAPGEF5Q92565 580 aa27.05■■□□□ 1.92
SDCCAG3-201ENST00000298537 MCRS1Q96EZ8 462 aa27.05■■□□□ 1.92
SDCCAG3-201ENST00000298537 ZNF560Q96MR9 790 aa27.05■■□□□ 1.92
SDCCAG3-201ENST00000298537 B3GNT5Q9BYG0 378 aa27.05■■□□□ 1.92
SDCCAG3-201ENST00000298537 GPR182O15218 404 aa27.04■■□□□ 1.92
SDCCAG3-201ENST00000298537 COILP38432 576 aaPredicted RBP27.04■■□□□ 1.92
SDCCAG3-201ENST00000298537 CLCNKBP51801 687 aa27.04■■□□□ 1.92
SDCCAG3-201ENST00000298537 FAM193AP78312 1265 aa27.04■■□□□ 1.92
SDCCAG3-201ENST00000298537 PDE4CQ08493 712 aa27.04■■□□□ 1.92
SDCCAG3-201ENST00000298537 KCNT1Q5JUK3 1230 aa27.04■■□□□ 1.92
SDCCAG3-201ENST00000298537 REM2Q8IYK8 340 aaPredicted RBP27.04■■□□□ 1.92
SDCCAG3-201ENST00000298537 APPL2Q8NEU8 664 aa27.04■■□□□ 1.92
SDCCAG3-201ENST00000298537 TSPYL2Q9H2G4 693 aaPredicted RBP27.04■■□□□ 1.92
SDCCAG3-201ENST00000298537 AGPSO00116 658 aa27.04■■□□□ 1.92
SDCCAG3-201ENST00000298537 LRCH4O75427 683 aa27.04■■□□□ 1.92
SDCCAG3-201ENST00000298537 ZNF268Q14587 947 aaPredicted RBP27.04■■□□□ 1.92
SDCCAG3-201ENST00000298537 CYP1B1Q16678 543 aa27.04■■□□□ 1.92
SDCCAG3-201ENST00000298537 ZFYVE27Q5T4F4 411 aa27.04■■□□□ 1.92
SDCCAG3-201ENST00000298537 OR6B2Q6IFH4 312 aa27.04■■□□□ 1.92
SDCCAG3-201ENST00000298537 EMBQ6PCB8 327 aa27.04■■□□□ 1.92
SDCCAG3-201ENST00000298537 MFSD7Q6UXD7 560 aa27.04■■□□□ 1.92
SDCCAG3-201ENST00000298537 TIMM13Q9Y5L4 95 aaPredicted RBP27.04■■□□□ 1.92
SDCCAG3-201ENST00000298537 CASTOR2A6NHX0 329 aa27.03■■□□□ 1.92
SDCCAG3-201ENST00000298537 XPOTO43592 962 aaKnown RBP27.03■■□□□ 1.92
SDCCAG3-201ENST00000298537 TKTP29401 623 aaKnown RBP27.03■■□□□ 1.92
SDCCAG3-201ENST00000298537 LRPAP1P30533 357 aa27.03■■□□□ 1.92
SDCCAG3-201ENST00000298537 CHRNA3P32297 505 aa27.03■■□□□ 1.92
SDCCAG3-201ENST00000298537 GYS2P54840 703 aa27.03■■□□□ 1.92
SDCCAG3-201ENST00000298537 KLF1Q13351 362 aaPredicted RBP27.03■■□□□ 1.92
SDCCAG3-201ENST00000298537 WSCD1Q658N2 575 aa27.03■■□□□ 1.92
SDCCAG3-201ENST00000298537 KAZNQ674X7 775 aa27.03■■□□□ 1.92
SDCCAG3-201ENST00000298537 ADGRF2Q8IZF7 708 aa27.03■■□□□ 1.92
SDCCAG3-201ENST00000298537 CAVIN3Q969G5 261 aa27.03■■□□□ 1.92
SDCCAG3-201ENST00000298537 ZWILCHQ9H900 591 aa27.03■■□□□ 1.92
SDCCAG3-201ENST00000298537 CHST12Q9NRB3 414 aa27.03■■□□□ 1.92
SDCCAG3-201ENST00000298537 KIAA1257Q9ULG3 409 aa27.03■■□□□ 1.92
SDCCAG3-201ENST00000298537 SNX24Q9Y343 169 aa27.03■■□□□ 1.92
SDCCAG3-201ENST00000298537 LIMS2Q7Z4I7 341 aa27.02■■□□□ 1.92
SDCCAG3-201ENST00000298537 SCUBE3Q8IX30 993 aa27.02■■□□□ 1.92
SDCCAG3-201ENST00000298537 TTC39CQ8N584 583 aa27.02■■□□□ 1.92
SDCCAG3-201ENST00000298537 CLEC4CQ8WTT0 213 aa27.02■■□□□ 1.92
SDCCAG3-201ENST00000298537 SEC14L1Q92503 715 aa27.02■■□□□ 1.92
SDCCAG3-201ENST00000298537 ADAM2Q99965 735 aa27.02■■□□□ 1.92
SDCCAG3-201ENST00000298537 UTP11Q9Y3A2 253 aaKnown RBP27.02■■□□□ 1.92
SDCCAG3-201ENST00000298537 MKI67P46013 3256 aaKnown RBP27.02■■□□□ 1.92
SDCCAG3-201ENST00000298537 POMCP01189 267 aa27.02■■□□□ 1.92
SDCCAG3-201ENST00000298537 KRT1P04264 644 aa27.02■■□□□ 1.92
SDCCAG3-201ENST00000298537 HSPA6P17066 643 aa27.02■■□□□ 1.92
SDCCAG3-201ENST00000298537 PTK7Q13308 1070 aa27.02■■□□□ 1.92
SDCCAG3-201ENST00000298537 PIGHQ14442 188 aaPredicted RBP27.02■■□□□ 1.92
SDCCAG3-201ENST00000298537 SV2CQ496J9 727 aa27.02■■□□□ 1.92
SDCCAG3-201ENST00000298537 UNC93AQ86WB7 457 aa27.02■■□□□ 1.92
SDCCAG3-201ENST00000298537 CCDC105Q8IYK2 499 aa27.02■■□□□ 1.92
SDCCAG3-201ENST00000298537 PXYLP1Q8TE99 480 aa27.02■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms