RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 MMRN2Q9H8L6 949 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 SLC28A3Q9HAS3 691 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 METTL14Q9HCE5 456 aaKnown RBP6.34□□□□□ -1.39
SSX3-201ENST00000298396 SIX2Q9NPC8 291 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 CHST7Q9NS84 486 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 TAB2Q9NYJ8 693 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 LIMA1Q9UHB6 759 aaKnown RBP6.34□□□□□ -1.39
SSX3-201ENST00000298396 DMGDHQ9UI17 866 aaKnown RBP6.34□□□□□ -1.39
SSX3-201ENST00000298396 AJAP1Q9UKB5 411 aaPredicted RBP6.34□□□□□ -1.39
SSX3-201ENST00000298396 L1RE1Q9UN81 338 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 POLIQ9UNA4 740 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 HCN4Q9Y3Q4 1203 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 NUB1Q9Y5A7 615 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 PCDHB12Q9Y5F1 795 aa6.34□□□□□ -1.39
SSX3-201ENST00000298396 TCF20Q9UGU0 1960 aaKnown RBP6.34□□□□□ -1.39
SSX3-201ENST00000298396 NCOR1O75376 2440 aa6.34□□□□□ -1.4
SSX3-201ENST00000298396 XIRP2A4UGR9 3374 aa6.34□□□□□ -1.4
SSX3-201ENST00000298396 A0A1W2PNR3 127 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 LRRC10BA6NIK2 292 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 TEX33O43247 280 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 XPOTO43592 962 aaKnown RBP6.33□□□□□ -1.4
SSX3-201ENST00000298396 TBC1D4O60343 1298 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 B3GAT3O94766 335 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 CSPG5O95196 566 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 VNN2O95498 520 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 SOD2P04179 222 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 KRT19P08727 400 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 RPL17P18621 184 aaKnown RBP6.33□□□□□ -1.4
SSX3-201ENST00000298396 EEF1GP26641 437 aaKnown RBP6.33□□□□□ -1.4
SSX3-201ENST00000298396 PPM1AP35813 382 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 ASPAP45381 313 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 MTIF2P46199 727 aaKnown RBP6.33□□□□□ -1.4
SSX3-201ENST00000298396 RAP1GAPP47736 663 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 TAF6P49848 677 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 KLK7P49862 253 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 COPB1P53618 953 aaKnown RBP6.33□□□□□ -1.4
SSX3-201ENST00000298396 NOP14P78316 857 aaKnown RBP6.33□□□□□ -1.4
SSX3-201ENST00000298396 RBP5P82980 135 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 MYL7Q01449 175 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 DSG1Q02413 1049 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 KCNMA1Q12791 1236 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 BIRC3Q13489 604 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 MRPL58Q14197 206 aaKnown RBP6.33□□□□□ -1.4
SSX3-201ENST00000298396 PTPN14Q15678 1187 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 DBN1Q16643 649 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 MAN2A1Q16706 1144 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 TPD52L1Q16890 204 aaPredicted RBP6.33□□□□□ -1.4
SSX3-201ENST00000298396 SOWAHAQ2M3V2 549 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 KRT39Q6A163 491 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 PRSS55Q6UWB4 352 aaPredicted RBP6.33□□□□□ -1.4
SSX3-201ENST00000298396 ADGRD2Q7Z7M1 963 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 ARHGEF19Q8IW93 802 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 PDCL2Q8N4E4 241 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 LRRC52Q8N7C0 313 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 UBR7Q8N806 425 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 RNF214Q8ND24 703 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 POF1BQ8WVV4 589 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 KAT5Q92993 513 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 HPDLQ96IR7 371 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 SENP8Q96LD8 212 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 NAP1L5Q96NT1 182 aaPredicted RBP6.33□□□□□ -1.4
SSX3-201ENST00000298396 SAMD11Q96NU1 681 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 TMEM209Q96SK2 561 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 TUBGCP2Q9BSJ2 902 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 CRACR2AQ9BSW2 395 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 C11orf84Q9BUA3 381 aaPredicted RBP6.33□□□□□ -1.4
SSX3-201ENST00000298396 COLEC11Q9BWP8 271 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 SMYD3Q9H7B4 428 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 GDAP2Q9NXN4 497 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 LZTS1Q9Y250 596 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 SIK3Q9Y2K2 1263 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 RWDD3Q9Y3V2 267 aa6.33□□□□□ -1.4
SSX3-201ENST00000298396 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.33□□□□□ -1.4
SSX3-201ENST00000298396 TIMM13Q9Y5L4 95 aaPredicted RBP6.33□□□□□ -1.4
SSX3-201ENST00000298396 SF3B1O75533 1304 aaKnown RBP eCLIP6.32□□□□□ -1.4
SSX3-201ENST00000298396 C2orf71A6NGG8 1288 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 SMTNL1A8MU46 457 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 LGALS16A8MUM7 142 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 KPNA7A9QM74 516 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 TGFBR3LH3BV60 316 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 CYB561D2O14569 222 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 EPHB6O15197 1021 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 EFSO43281 561 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 TADA2AO75478 443 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 NOL4O94818 638 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 FGFR1OPO95684 399 aaKnown RBP6.32□□□□□ -1.4
SSX3-201ENST00000298396 AFPP02771 609 aaKnown RBP6.32□□□□□ -1.4
SSX3-201ENST00000298396 CYP11A1P05108 521 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 FAM157BP0CG42 384 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 CTSAP10619 480 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 SLC9A1P19634 815 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 PON1P27169 355 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 GTF2F1P35269 517 aaKnown RBP eCLIP6.32□□□□□ -1.4
SSX3-201ENST00000298396 PBX1P40424 430 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 PIK3CAP42336 1068 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 AP3M2P53677 418 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 CDH8P55286 799 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 RBM10P98175 930 aaKnown RBP6.32□□□□□ -1.4
SSX3-201ENST00000298396 UBE3AQ05086 875 aa6.32□□□□□ -1.4
SSX3-201ENST00000298396 ZNF699Q32M78 642 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms