RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 CCDC142Q17RM4 750 aa26.07■■□□□ 1.76
GTF2A1-201ENST00000298173 PTPN20Q4JDL3 420 aa26.07■■□□□ 1.76
GTF2A1-201ENST00000298173 C2CD6Q53TS8 623 aa26.07■■□□□ 1.76
GTF2A1-201ENST00000298173 FUT10Q6P4F1 479 aa26.07■■□□□ 1.76
GTF2A1-201ENST00000298173 ERICH1Q86X53 443 aa26.07■■□□□ 1.76
GTF2A1-201ENST00000298173 THEM5Q8N1Q8 247 aa26.07■■□□□ 1.76
GTF2A1-201ENST00000298173 TPCN2Q8NHX9 752 aa26.07■■□□□ 1.76
GTF2A1-201ENST00000298173 MYCBPAPQ8TBZ2 947 aa26.07■■□□□ 1.76
GTF2A1-201ENST00000298173 SLC2A14Q8TDB8 520 aa26.07■■□□□ 1.76
GTF2A1-201ENST00000298173 BCL7CQ8WUZ0 217 aaPredicted RBP26.07■■□□□ 1.76
GTF2A1-201ENST00000298173 HERVK_113Q902F9 699 aa26.07■■□□□ 1.76
GTF2A1-201ENST00000298173 GJB5O95377 273 aa26.06■■□□□ 1.76
GTF2A1-201ENST00000298173 SETSIPP0DME0 302 aa26.06■■□□□ 1.76
GTF2A1-201ENST00000298173 GABRB2P47870 512 aa26.06■■□□□ 1.76
GTF2A1-201ENST00000298173 HTRA4P83105 476 aaPredicted RBP26.06■■□□□ 1.76
GTF2A1-201ENST00000298173 OR10T2Q8NGX3 314 aa26.06■■□□□ 1.76
GTF2A1-201ENST00000298173 CPXM1Q96SM3 734 aa26.06■■□□□ 1.76
GTF2A1-201ENST00000298173 HESX1Q9UBX0 185 aa26.06■■□□□ 1.76
GTF2A1-201ENST00000298173 ZMYND8Q9ULU4 1186 aaPredicted RBP26.06■■□□□ 1.76
GTF2A1-201ENST00000298173 TCRBV5S1A1TA0A578 114 aa26.06■■□□□ 1.76
GTF2A1-201ENST00000298173 ZBBXA8MT70 800 aa26.06■■□□□ 1.76
GTF2A1-201ENST00000298173 ATMINO43313 823 aaPredicted RBP26.06■■□□□ 1.76
GTF2A1-201ENST00000298173 CALB1P05937 261 aa26.06■■□□□ 1.76
GTF2A1-201ENST00000298173 NOP2P46087 812 aaKnown RBP26.06■■□□□ 1.76
GTF2A1-201ENST00000298173 PLCB3Q01970 1234 aa26.06■■□□□ 1.76
GTF2A1-201ENST00000298173 ELAVL2Q12926 359 aaKnown RBP26.06■■□□□ 1.76
GTF2A1-201ENST00000298173 BTG3Q14201 252 aaPredicted RBP26.06■■□□□ 1.76
GTF2A1-201ENST00000298173 IFI16Q16666 785 aaKnown RBP26.06■■□□□ 1.76
GTF2A1-201ENST00000298173 MDH1BQ5I0G3 518 aa26.06■■□□□ 1.76
GTF2A1-201ENST00000298173 INTS6LQ5JSJ4 861 aaKnown RBP26.06■■□□□ 1.76
GTF2A1-201ENST00000298173 DNTTIP2Q5QJE6 756 aaKnown RBP26.06■■□□□ 1.76
GTF2A1-201ENST00000298173 FAM171A1Q5VUB5 890 aa26.06■■□□□ 1.76
GTF2A1-201ENST00000298173 PLEKHA7Q6IQ23 1121 aa26.06■■□□□ 1.76
GTF2A1-201ENST00000298173 STK32AQ8WU08 396 aa26.06■■□□□ 1.76
GTF2A1-201ENST00000298173 CALR3Q96L12 384 aaKnown RBP26.06■■□□□ 1.76
GTF2A1-201ENST00000298173 B3GNT5Q9BYG0 378 aa26.06■■□□□ 1.76
GTF2A1-201ENST00000298173 UVRAGQ9P2Y5 699 aa26.06■■□□□ 1.76
GTF2A1-201ENST00000298173 CHORDC1Q9UHD1 332 aaPredicted RBP26.06■■□□□ 1.76
GTF2A1-201ENST00000298173 SF3B1O75533 1304 aaKnown RBP eCLIP26.05■■□□□ 1.768e-6■■■■■ 107
GTF2A1-201ENST00000298173 GRID2IPA4D2P6 1211 aa26.05■■□□□ 1.76
GTF2A1-201ENST00000298173 CAPN15O75808 1086 aa26.05■■□□□ 1.76
GTF2A1-201ENST00000298173 RPL34P49207 117 aaKnown RBP26.05■■□□□ 1.76
GTF2A1-201ENST00000298173 NAP1L1P55209 391 aaKnown RBP26.05■■□□□ 1.76
GTF2A1-201ENST00000298173 PDE4CQ08493 712 aa26.05■■□□□ 1.76
GTF2A1-201ENST00000298173 PDCLQ13371 301 aa26.05■■□□□ 1.76
GTF2A1-201ENST00000298173 KCNT2Q6UVM3 1135 aa26.05■■□□□ 1.76
GTF2A1-201ENST00000298173 LRRTM3Q86VH5 581 aa26.05■■□□□ 1.76
GTF2A1-201ENST00000298173 RNF168Q8IYW5 571 aaPredicted RBP26.05■■□□□ 1.76
GTF2A1-201ENST00000298173 LRRC57Q8N9N7 239 aa26.05■■□□□ 1.76
GTF2A1-201ENST00000298173 KIF18AQ8NI77 898 aa26.05■■□□□ 1.76
GTF2A1-201ENST00000298173 PCED1BQ96HM7 432 aa26.05■■□□□ 1.76
GTF2A1-201ENST00000298173 IGSF21Q96ID5 467 aa26.05■■□□□ 1.76
GTF2A1-201ENST00000298173 SLC4A5Q9BY07 1137 aa26.05■■□□□ 1.76
GTF2A1-201ENST00000298173 CTTNBP2NLQ9P2B4 639 aa26.05■■□□□ 1.76
GTF2A1-201ENST00000298173 MRPL42Q9Y6G3 142 aaKnown RBP26.05■■□□□ 1.76
GTF2A1-201ENST00000298173 ADORA2BP29275 332 aa26.04■■□□□ 1.76
GTF2A1-201ENST00000298173 BCAT1P54687 386 aa26.04■■□□□ 1.76
GTF2A1-201ENST00000298173 GSCP56915 257 aaPredicted RBP26.04■■□□□ 1.76
GTF2A1-201ENST00000298173 VARS2Q5ST30 1063 aaKnown RBP26.04■■□□□ 1.76
GTF2A1-201ENST00000298173 LIN9Q5TKA1 542 aa26.04■■□□□ 1.76
GTF2A1-201ENST00000298173 PMF1Q6P1K2 205 aa26.04■■□□□ 1.76
GTF2A1-201ENST00000298173 LLGL2Q6P1M3 1020 aa26.04■■□□□ 1.76
GTF2A1-201ENST00000298173 SLFN11Q7Z7L1 901 aa26.04■■□□□ 1.76
GTF2A1-201ENST00000298173 DUSP16Q9BY84 665 aa26.04■■□□□ 1.76
GTF2A1-201ENST00000298173 TULP2O00295 520 aa26.03■■□□□ 1.76
GTF2A1-201ENST00000298173 PALMO75781 387 aa26.03■■□□□ 1.76
GTF2A1-201ENST00000298173 CASQ1P31415 396 aa26.03■■□□□ 1.76
GTF2A1-201ENST00000298173 BST2Q10589 180 aaKnown RBP26.03■■□□□ 1.76
GTF2A1-201ENST00000298173 MAMLD1Q13495 774 aa26.03■■□□□ 1.76
GTF2A1-201ENST00000298173 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.03■■□□□ 1.76
GTF2A1-201ENST00000298173 ZNF592Q92610 1267 aa26.03■■□□□ 1.76
GTF2A1-201ENST00000298173 DPF3Q92784 378 aa26.03■■□□□ 1.76
GTF2A1-201ENST00000298173 C18orf8Q96DM3 657 aa26.03■■□□□ 1.76
GTF2A1-201ENST00000298173 ALS2CR12Q96Q35 445 aa26.03■■□□□ 1.76
GTF2A1-201ENST00000298173 TMEM209Q96SK2 561 aa26.03■■□□□ 1.76
GTF2A1-201ENST00000298173 YME1L1Q96TA2 773 aa26.03■■□□□ 1.76
GTF2A1-201ENST00000298173 NUP85Q9BW27 656 aa26.03■■□□□ 1.76
GTF2A1-201ENST00000298173 TJP2Q9UDY2 1190 aa26.03■■□□□ 1.76
GTF2A1-201ENST00000298173 NLRC5Q86WI3 1866 aa26.03■■□□□ 1.76
GTF2A1-201ENST00000298173 CLDN5O00501 218 aa26.03■■□□□ 1.76
GTF2A1-201ENST00000298173 TAS1R1Q7RTX1 841 aa26.03■■□□□ 1.76
GTF2A1-201ENST00000298173 TMEM110Q86TL2 294 aa26.03■■□□□ 1.76
GTF2A1-201ENST00000298173 PHOSPHO2Q8TCD6 241 aa26.03■■□□□ 1.76
GTF2A1-201ENST00000298173 TMLHEQ9NVH6 421 aa26.03■■□□□ 1.76
GTF2A1-201ENST00000298173 STRIP2Q9ULQ0 834 aa26.03■■□□□ 1.76
GTF2A1-201ENST00000298173 GABBR2O75899 941 aa26.02■■□□□ 1.76
GTF2A1-201ENST00000298173 ERBB2P04626 1255 aa26.02■■□□□ 1.76
GTF2A1-201ENST00000298173 RASIP1Q5U651 963 aa26.02■■□□□ 1.76
GTF2A1-201ENST00000298173 PHLDB2Q86SQ0 1253 aa26.02■■□□□ 1.76
GTF2A1-201ENST00000298173 SLC39A11Q8N1S5 342 aa26.02■■□□□ 1.76
GTF2A1-201ENST00000298173 VN1R3Q9BXE9 311 aa26.02■■□□□ 1.76
GTF2A1-201ENST00000298173 ZCWPW1Q9H0M4 648 aa26.02■■□□□ 1.76
GTF2A1-201ENST00000298173 JRKLQ9Y4A0 524 aa26.02■■□□□ 1.76
GTF2A1-201ENST00000298173 PTPRDP23468 1912 aa26.02■■□□□ 1.76
GTF2A1-201ENST00000298173 CARNS1A5YM72 827 aa26.01■■□□□ 1.75
GTF2A1-201ENST00000298173 TBC1D4O60343 1298 aa26.01■■□□□ 1.75
GTF2A1-201ENST00000298173 LAG3P18627 525 aa26.01■■□□□ 1.75
GTF2A1-201ENST00000298173 ZNF268Q14587 947 aaPredicted RBP26.01■■□□□ 1.75
GTF2A1-201ENST00000298173 ZNF564Q8TBZ8 553 aaPredicted RBP26.01■■□□□ 1.75
GTF2A1-201ENST00000298173 ZNF558Q96NG5 402 aa26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms